BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0015.p         (129 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772417.1| hypothetical protein blr5777 [Bradyrhizobium ja...   223   8e-57
ref|YP_004285628.1| hypothetical protein ACMV_33990 [Acidiphiliu...   182   2e-44
ref|YP_001236161.1| hypothetical protein Acry_3053 [Acidiphilium...   179   1e-43
ref|ZP_08632386.1| hypothetical protein APM_1349 [Acidiphilium s...   179   2e-43
ref|YP_002287810.1| hypothetical protein [Oligotropha carboxidov...   164   5e-39

>ref|NP_772417.1| hypothetical protein blr5777 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51042.1| blr5777 [Bradyrhizobium japonicum USDA 110]
          Length = 129

 Score =  223 bits (568), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 124/129 (96%)

Query: 1   MTYHFSKTVDMPFYAAVSATTAALKSHGFGVLTQIDVKDTLNKKIGAKFRPYLILGACNP 60
           MTYHFSKTVD+PF AAV+ATTAALK HGFGVLTQIDVKDTLNKK+GA+FRPYLILGACNP
Sbjct: 1   MTYHFSKTVDLPFDAAVAATTAALKHHGFGVLTQIDVKDTLNKKLGAEFRPYLILGACNP 60

Query: 61  KLAYEALMLEDKIGTMLPCNVVVQQHEGGRVEISAVDPVASMSAIENQKLGAVAGKVRDL 120
           KLAYEAL LEDKIGTMLPCNVVVQQ EGG+VEISAVDPVASM+AIEN KLGAVAG+VR+L
Sbjct: 61  KLAYEALTLEDKIGTMLPCNVVVQQREGGKVEISAVDPVASMAAIENPKLGAVAGQVREL 120

Query: 121 LRQVVAEIA 129
           L+QVVAEIA
Sbjct: 121 LKQVVAEIA 129


>ref|YP_004285628.1| hypothetical protein ACMV_33990 [Acidiphilium multivorum AIU301]
 dbj|BAJ82746.1| hypothetical protein ACMV_33990 [Acidiphilium multivorum AIU301]
          Length = 129

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/129 (65%), Positives = 102/129 (79%)

Query: 1   MTYHFSKTVDMPFYAAVSATTAALKSHGFGVLTQIDVKDTLNKKIGAKFRPYLILGACNP 60
           M+YH SK V + F AAV AT AAL++ GFGVLT IDV DT+ KK+G  FRPY ILGACNP
Sbjct: 1   MSYHLSKMVGLGFDAAVDATIAALQAEGFGVLTDIDVADTMQKKLGVAFRPYRILGACNP 60

Query: 61  KLAYEALMLEDKIGTMLPCNVVVQQHEGGRVEISAVDPVASMSAIENQKLGAVAGKVRDL 120
           ++A+EAL LEDK+GTMLPCNV+VQQH+ G VE+SA+DPV SM  I+N +L  +AG VRD+
Sbjct: 61  RMAHEALKLEDKVGTMLPCNVIVQQHDDGSVEVSAIDPVTSMQGIDNPELARLAGTVRDM 120

Query: 121 LRQVVAEIA 129
           LR VV  IA
Sbjct: 121 LRSVVNRIA 129


>ref|YP_001236161.1| hypothetical protein Acry_3053 [Acidiphilium cryptum JF-5]
 gb|ABQ32242.1| protein of unknown function DUF302 [Acidiphilium cryptum JF-5]
          Length = 129

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/129 (65%), Positives = 101/129 (78%)

Query: 1   MTYHFSKTVDMPFYAAVSATTAALKSHGFGVLTQIDVKDTLNKKIGAKFRPYLILGACNP 60
           M+YH SK V + F AAV AT AAL++ GFGVLT IDV  T+ KK+G  FRPY ILGACNP
Sbjct: 1   MSYHLSKMVGLGFDAAVDATIAALQAEGFGVLTDIDVAATMQKKLGVAFRPYRILGACNP 60

Query: 61  KLAYEALMLEDKIGTMLPCNVVVQQHEGGRVEISAVDPVASMSAIENQKLGAVAGKVRDL 120
           ++A+EAL LEDK+GTMLPCNVVVQQH+ G VE+SA+DPV SM  I+N +L  +AG VRD+
Sbjct: 61  RMAHEALKLEDKVGTMLPCNVVVQQHDDGSVEVSAIDPVTSMQGIDNPELARLAGTVRDM 120

Query: 121 LRQVVAEIA 129
           LR VV  IA
Sbjct: 121 LRSVVNRIA 129


>ref|ZP_08632386.1| hypothetical protein APM_1349 [Acidiphilium sp. PM]
 gb|EGO95826.1| hypothetical protein APM_1349 [Acidiphilium sp. PM]
          Length = 129

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/129 (64%), Positives = 101/129 (78%)

Query: 1   MTYHFSKTVDMPFYAAVSATTAALKSHGFGVLTQIDVKDTLNKKIGAKFRPYLILGACNP 60
           M+YH SK V + F AAV AT AAL++ GFGVLT IDV  T+ KK+G  FRPY ILGACNP
Sbjct: 1   MSYHLSKMVGLGFDAAVDATIAALQAEGFGVLTDIDVAATMQKKLGVAFRPYRILGACNP 60

Query: 61  KLAYEALMLEDKIGTMLPCNVVVQQHEGGRVEISAVDPVASMSAIENQKLGAVAGKVRDL 120
           ++A+EAL LEDK+GTMLPCNV+VQQH+ G VE+SA+DPV SM  I+N +L  +AG VRD+
Sbjct: 61  RMAHEALKLEDKVGTMLPCNVIVQQHDDGSVEVSAIDPVTSMQGIDNPELARLAGTVRDM 120

Query: 121 LRQVVAEIA 129
           LR VV  IA
Sbjct: 121 LRSVVNRIA 129


>ref|YP_002287810.1| hypothetical protein [Oligotropha carboxidovorans OM5]
 ref|YP_004634067.1| hypothetical protein OCA5_c31420 [Oligotropha carboxidovorans OM5]
 gb|ACI91945.1| domain of unknown function superfamily [Oligotropha carboxidovorans
           OM5]
 gb|AEI04196.1| hypothetical protein OCA4_c30900 [Oligotropha carboxidovorans OM4]
 gb|AEI07826.1| hypothetical protein OCA5_c31420 [Oligotropha carboxidovorans OM5]
          Length = 127

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 102/128 (79%), Gaps = 1/128 (0%)

Query: 1   MTYHFSKTVDMPFYAAVSATTAALKSHGFGVLTQIDVKDTLNKKIGAKFRPYLILGACNP 60
           M+Y+F+KT+++PF  AV  T AALK  GFGVLT+IDVK TL +K+  +FRPY+ILGACNP
Sbjct: 1   MSYYFAKTLNVPFDQAVEITIAALKQRGFGVLTRIDVKSTLKEKLDVEFRPYVILGACNP 60

Query: 61  KLAYEALMLEDKIGTMLPCNVVVQQHEGGRVEISAVDPVASMSAIENQKLGAVAGKVRDL 120
           ++A++AL  EDKIGTMLPCNV+VQ+ + G+ E++AVDPVASM AI+N  L A+A KVRD 
Sbjct: 61  RMAHQALQAEDKIGTMLPCNVIVQELD-GKSEVAAVDPVASMQAIDNDTLTAIAMKVRDE 119

Query: 121 LRQVVAEI 128
           L+  +  +
Sbjct: 120 LKATIQSL 127