BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0013.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772415.1| thioredoxin [Bradyrhizobium japonicum USDA 110]...   195   2e-48
ref|YP_001205236.1| putative thioredoxin [Bradyrhizobium sp. ORS...   168   3e-40
ref|YP_001239707.1| thioredoxin [Bradyrhizobium sp. BTAi1] >gi|1...   162   2e-38
ref|YP_674814.1| thioredoxin [Mesorhizobium sp. BNC1] >gi|110285...   134   5e-30
ref|YP_004106586.1| thioredoxin [Rhodopseudomonas palustris DX-1...   132   1e-29

>ref|NP_772415.1| thioredoxin [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51040.1| blr5775 [Bradyrhizobium japonicum USDA 110]
          Length = 147

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/112 (83%), Positives = 100/112 (89%)

Query: 1   MFTGHPIEVDEEGFARQLANSDVPLLVDVWAPWCGPCRAMAPMFERAAQQLEPRVRPLKL 60
           MFTGHPIEVDEE F R + NSD+P+LVDVWAPWCGPCRAMAPMFERAAQQLEP++R LKL
Sbjct: 36  MFTGHPIEVDEEAFGRHVVNSDIPVLVDVWAPWCGPCRAMAPMFERAAQQLEPQIRLLKL 95

Query: 61  NSDRAAATSSRLNITGIPTLLLMRRGREIARHSGVMDARSIVAWTEAGLTHS 112
           NSD A A SSRLNITGIPTLLLMR GREIARH+G MDARSIVAWT+A LT S
Sbjct: 96  NSDNAPALSSRLNITGIPTLLLMRGGREIARHAGAMDARSIVAWTQASLTRS 147


>ref|YP_001205236.1| putative thioredoxin [Bradyrhizobium sp. ORS 278]
 emb|CAL77001.1| putative thioredoxin [Bradyrhizobium sp. ORS 278]
          Length = 146

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 93/109 (85%)

Query: 1   MFTGHPIEVDEEGFARQLANSDVPLLVDVWAPWCGPCRAMAPMFERAAQQLEPRVRPLKL 60
           +F+GHPIEVD+ GF R LANSD+PLLVDVWAPWCGPCRAMAPMF RAA+ LEPRV+ LKL
Sbjct: 36  LFSGHPIEVDQAGFTRHLANSDLPLLVDVWAPWCGPCRAMAPMFARAAEALEPRVQLLKL 95

Query: 61  NSDRAAATSSRLNITGIPTLLLMRRGREIARHSGVMDARSIVAWTEAGL 109
           NSD A   S++  I+GIPTLLL+++GRE+AR SG MD++ IVAWT +GL
Sbjct: 96  NSDEAPEVSAKFGISGIPTLLLLQKGRELARISGAMDSQRIVAWTLSGL 144


>ref|YP_001239707.1| thioredoxin [Bradyrhizobium sp. BTAi1]
 gb|ABQ35801.1| thioredoxin [Bradyrhizobium sp. BTAi1]
          Length = 146

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 92/109 (84%)

Query: 1   MFTGHPIEVDEEGFARQLANSDVPLLVDVWAPWCGPCRAMAPMFERAAQQLEPRVRPLKL 60
           +F+GHPIEVD+  F R +A+SD+PLLVDVWAPWCGPCRAMAPMF RAA+ LEPRV+ LKL
Sbjct: 36  LFSGHPIEVDQAAFERHVAHSDLPLLVDVWAPWCGPCRAMAPMFARAAEALEPRVQLLKL 95

Query: 61  NSDRAAATSSRLNITGIPTLLLMRRGREIARHSGVMDARSIVAWTEAGL 109
           NSD A   S++  I+GIPTLLL+++GRE+AR SG MD++ IVAWT +GL
Sbjct: 96  NSDEAPEISAKFGISGIPTLLLLQKGRELARISGAMDSQRIVAWTLSGL 144


>ref|YP_674814.1| thioredoxin [Mesorhizobium sp. BNC1]
 gb|ABG63649.1| thioredoxin [Chelativorans sp. BNC1]
          Length = 148

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 79/109 (72%)

Query: 1   MFTGHPIEVDEEGFARQLANSDVPLLVDVWAPWCGPCRAMAPMFERAAQQLEPRVRPLKL 60
           +F+GHP +VD +   RQ+A S VP+LVDVWAPWCGPCR MAP FE AA++LEPR+R +KL
Sbjct: 35  LFSGHPEDVDADILERQIARSTVPVLVDVWAPWCGPCRMMAPAFEAAARELEPRLRLVKL 94

Query: 61  NSDRAAATSSRLNITGIPTLLLMRRGREIARHSGVMDARSIVAWTEAGL 109
           NSD   + ++RL I GIPT++L   GREIAR SG M A  IV W    L
Sbjct: 95  NSDVEQSAAARLGIRGIPTMILFHGGREIARTSGAMTAAQIVQWARGRL 143


>ref|YP_004106586.1| thioredoxin [Rhodopseudomonas palustris DX-1]
 gb|ADU41853.1| thioredoxin [Rhodopseudomonas palustris DX-1]
          Length = 145

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 78/109 (71%)

Query: 1   MFTGHPIEVDEEGFARQLANSDVPLLVDVWAPWCGPCRAMAPMFERAAQQLEPRVRPLKL 60
           +F GHP +V  E F +Q+A S VP+LVDVWAPWCGPCRAMAP +E+AA++LEP VR +KL
Sbjct: 35  LFEGHPADVGGELFDKQVARSSVPVLVDVWAPWCGPCRAMAPAYEQAARELEPNVRLIKL 94

Query: 61  NSDRAAATSSRLNITGIPTLLLMRRGREIARHSGVMDARSIVAWTEAGL 109
           NSD     ++RL I GIPT++L   GRE AR SG M A+ IV W    L
Sbjct: 95  NSDNEQQIAARLGIQGIPTMILFENGRERARTSGAMPAQQIVRWVRQHL 143