BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0012.p         (64 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772414.1| sulfide-quinone reductase [Bradyrhizobium japon...    56   2e-06
ref|YP_001239706.1| sulfide-quinone reductase [Bradyrhizobium sp...    49   2e-04
ref|YP_001205235.1| sulfide-quinone reductase [Bradyrhizobium sp...    48   6e-04
ref|YP_002300078.1| sulfide-quinone reductase [Rhodospirillum ce...    39   0.26 
ref|YP_355064.1| sulfide-quinone reductase [Rhodobacter sphaeroi...    37   1.2  

>ref|NP_772414.1| sulfide-quinone reductase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51039.1| blr5774 [Bradyrhizobium japonicum USDA 110]
          Length = 428

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query: 37  RGESEPFYERFMPDKLNIAKIREVRTGT 64
           RGESEPFYERF+ DKLNIAKI+EVRTGT
Sbjct: 401 RGESEPFYERFLLDKLNIAKIKEVRTGT 428



 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/26 (96%), Positives = 26/26 (100%)

Query: 1  MAEVVVIGAGLSGTLMAYELLPQLGR 26
          MAEVVVIGAGLSGTLMAYELLPQLG+
Sbjct: 1  MAEVVVIGAGLSGTLMAYELLPQLGK 26


>ref|YP_001239706.1| sulfide-quinone reductase [Bradyrhizobium sp. BTAi1]
 gb|ABQ35800.1| sulfide-quinone oxidoreductase [Bradyrhizobium sp. BTAi1]
          Length = 428

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query: 37  RGESEPFYERFMPDKLNIAKIREVRTGT 64
           RG  EPFYE+F+ D+LNIAKI+EVRTGT
Sbjct: 401 RGTPEPFYEKFLLDRLNIAKIKEVRTGT 428



 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 24/24 (100%)

Query: 1  MAEVVVIGAGLSGTLMAYELLPQL 24
          MA+VVVIGAGLSG+LMAYELLPQ+
Sbjct: 1  MADVVVIGAGLSGSLMAYELLPQM 24


>ref|YP_001205235.1| sulfide-quinone reductase [Bradyrhizobium sp. ORS 278]
 emb|CAL77000.1| sulfide-quinone reductase [Bradyrhizobium sp. ORS 278]
          Length = 432

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 5/38 (13%)

Query: 27  IRKMLSPQDARGESEPFYERFMPDKLNIAKIREVRTGT 64
           +RKM      RG  EPFYE+F+ D+LNI KI+EVRTGT
Sbjct: 400 LRKM-----KRGTPEPFYEKFLLDRLNIGKIKEVRTGT 432



 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 24/24 (100%)

Query: 1  MAEVVVIGAGLSGTLMAYELLPQL 24
          MA+VVVIGAGLSG+LMAYELLPQ+
Sbjct: 5  MADVVVIGAGLSGSLMAYELLPQM 28


>ref|YP_002300078.1| sulfide-quinone reductase [Rhodospirillum centenum SW]
 gb|ACJ01266.1| sulfide-quinone reductase [Rhodospirillum centenum SW]
          Length = 435

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 17/24 (70%), Positives = 21/24 (87%)

Query: 1  MAEVVVIGAGLSGTLMAYELLPQL 24
          MAE+VV+GAGL GTL A+E+LP L
Sbjct: 1  MAEIVVLGAGLGGTLAAFEILPTL 24


>ref|YP_355064.1| sulfide-quinone reductase [Rhodobacter sphaeroides 2.4.1]
 ref|ZP_08415550.1| sulfide-quinone reductase [Rhodobacter sphaeroides WS8N]
 gb|ABA81163.1| sulfide-quinone reductase [Rhodobacter sphaeroides 2.4.1]
 gb|EGJ20346.1| sulfide-quinone reductase [Rhodobacter sphaeroides WS8N]
          Length = 426

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/24 (70%), Positives = 20/24 (83%)

Query: 1  MAEVVVIGAGLSGTLMAYELLPQL 24
          MA VVV+GAGL G++MAYEL  QL
Sbjct: 1  MAHVVVLGAGLGGSIMAYELHQQL 24