BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0255.0002.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_781235.1| hypothetical protein RPE_2314 [Rhodopseudomonas... 313 1e-83 ref|NP_772223.1| hypothetical protein blr5583 [Bradyrhizobium ja... 296 2e-78 ref|ZP_01046613.1| hypothetical protein NB311A_18331 [Nitrobacte... 291 7e-77 ref|YP_318780.1| hypothetical protein Nwi_2174 [Nitrobacter wino... 290 2e-76 ref|YP_577819.1| hypothetical protein Nham_2577 [Nitrobacter ham... 289 3e-76 >ref|YP_781235.1| hypothetical protein RPE_2314 [Rhodopseudomonas palustris BisA53] gb|ABJ06255.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 237 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 156/237 (65%), Positives = 181/237 (76%), Gaps = 1/237 (0%) Query: 19 MTLLSTAQHLARDTRRNPRAHLVPIIASAVIAAGAIALVAYLLWPTYTTIPPSDPSRLPV 78 MTL S+A + + R R H P+ ASAVIA AIA + YLL PT+ S P R PV Sbjct: 1 MTLFSSAHNGSPRRRPTRRGHHWPLFASAVIAGLAIAAIVYLLKPTWHAEKISAPDRTPV 60 Query: 79 SVGGTLFNVPTMAVRMKIQRHSGPQERVDLSFLYPSLDAPAAPKHYSADTVEDKVQPIDR 138 SVGGTLFNVPT A R+K+Q+HSGPQERVDL F YPSL AP PKH + DTVE QPIDR Sbjct: 61 SVGGTLFNVPTPAFRVKVQKHSGPQERVDLHFNYPSLQAPEKPKHVTIDTVEQIGQPIDR 120 Query: 139 IFVSIAAHHDSLAPDMRLRTIYPRYLDERA-NTDDGLTARAFRDGTPYGGEELFTASEPQ 197 IF+SIA H+D+LAPD RLRTIYPRYLD R DGLT RAFRDGTPYG E+LFTAS+P+ Sbjct: 121 IFLSIAEHNDALAPDQRLRTIYPRYLDSRVIPAADGLTQRAFRDGTPYGNEDLFTASDPE 180 Query: 198 LTARCTRDTSTPGMCLSERRIDGADLTFRFPRSWLAQWRDIATAMNRLSAQMHSAKG 254 L ARC+RD +TPGMCLSERRIDGADLTFRFPR WL QWR++A AM+RL+ Q+H+ + Sbjct: 181 LAARCSRDAATPGMCLSERRIDGADLTFRFPRQWLTQWREVAVAMDRLTLQLHATRN 237 >ref|NP_772223.1| hypothetical protein blr5583 [Bradyrhizobium japonicum USDA 110] dbj|BAC50848.1| blr5583 [Bradyrhizobium japonicum USDA 110] Length = 235 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/237 (63%), Positives = 181/237 (76%), Gaps = 3/237 (1%) Query: 19 MTLLSTAQHLARDTRRNPRAHLVPIIASAVIAAGAIALVAYLLWPTYTTIPPSDPSRLPV 78 MT+ S A R R RAH+VPI+ A A+ALVAYLLWPT+ T + P +LPV Sbjct: 1 MTVFSAAS--PRSPRTRTRAHIVPIVLGGAAAVCAVALVAYLLWPTWGTSGANAPDKLPV 58 Query: 79 SVGGTLFNVPTMAVRMKIQRHSGPQERVDLSFLYPSLDAPAAPKHYSADTVEDKVQPIDR 138 SVGGTLFN+PT A+RMKIQRHSGPQER+DL FLYPSL+ P PKH SADTV+ + PIDR Sbjct: 59 SVGGTLFNLPTTAIRMKIQRHSGPQERIDLDFLYPSLEPPGTPKHVSADTVDASLLPIDR 118 Query: 139 IFVSIAAHHDSLAPDMRLRTIYPRYLDERANT-DDGLTARAFRDGTPYGGEELFTASEPQ 197 IF+SIAAHHD+L+P+ R TIYPRYL+ A +DGLT R FR TPYG E+L++A+ P Sbjct: 119 IFLSIAAHHDALSPEQRTATIYPRYLEPGATMPEDGLTMRMFRADTPYGSEDLYSAASPA 178 Query: 198 LTARCTRDTSTPGMCLSERRIDGADLTFRFPRSWLAQWRDIATAMNRLSAQMHSAKG 254 LTARCTRD +TPGMCLSERR+ GADLTFRFPRSWL+QWRD A AM +L+AQ+ +G Sbjct: 179 LTARCTRDAATPGMCLSERRVGGADLTFRFPRSWLSQWRDAADAMEKLTAQLRGPRG 235 >ref|ZP_01046613.1| hypothetical protein NB311A_18331 [Nitrobacter sp. Nb-311A] gb|EAQ35449.1| hypothetical protein NB311A_18331 [Nitrobacter sp. Nb-311A] Length = 236 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 145/233 (62%), Positives = 171/233 (73%), Gaps = 2/233 (0%) Query: 19 MTLLSTAQHLARDTRRNPRAHLVPIIASAVIAAGAIALVAYLLWPTYTTIPPSDPSRLPV 78 M LL +A +R R HL+P++A+ IA A+ VAYLLWPT+T P + RLPV Sbjct: 1 MALLLSAPRRSRGKPLTGR-HLIPLLAAVTIAIPAVTAVAYLLWPTWTPKAPDNNERLPV 59 Query: 79 SVGGTLFNVPTMAVRMKIQRHSGPQERVDLSFLYPSLDAPAAPKHYSADTVEDKVQPIDR 138 S+G T+FNVP A R+KIQRHSG QER+DL+FLYPSL P AP+H +A+TVED QPIDR Sbjct: 60 SIGQTVFNVPERAFRVKIQRHSGSQERIDLNFLYPSLATPDAPRHVTAETVEDGPQPIDR 119 Query: 139 IFVSIAAHHDSLAPDMRLRTIYPRYLDER-ANTDDGLTARAFRDGTPYGGEELFTASEPQ 197 IF+SIAAHHDSLAPD+ + TIYPRYLD A DGL+ RAFRDGTPY GE+LF A P Sbjct: 120 IFLSIAAHHDSLAPDILVHTIYPRYLDATLAQPQDGLSIRAFRDGTPYAGEDLFVAQTPA 179 Query: 198 LTARCTRDTSTPGMCLSERRIDGADLTFRFPRSWLAQWRDIATAMNRLSAQMH 250 L ARCTR+ TPGMCLSERRI ADLTFRFPR WL+ WR +A M RL Q+H Sbjct: 180 LVARCTREALTPGMCLSERRIGNADLTFRFPRQWLSDWRYVAGVMERLVQQLH 232 >ref|YP_318780.1| hypothetical protein Nwi_2174 [Nitrobacter winogradskyi Nb-255] gb|ABA05428.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 238 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/216 (63%), Positives = 166/216 (76%), Gaps = 1/216 (0%) Query: 39 HLVPIIASAVIAAGAIALVAYLLWPTYTTIPPSDPSRLPVSVGGTLFNVPTMAVRMKIQR 98 HL P++A+AVIA +I VAYLLWPT+T P D RLPVS+G T+FNVP A R+K+QR Sbjct: 21 HLTPLLAAAVIAMPSITAVAYLLWPTWTPKAPDDNKRLPVSIGQTVFNVPERAFRVKVQR 80 Query: 99 HSGPQERVDLSFLYPSLDAPAAPKHYSADTVEDKVQPIDRIFVSIAAHHDSLAPDMRLRT 158 HSGPQER+DLSFLYPSL P AP+ +A++ ED+ + +DRIF+SIAAHHDSLAPD +RT Sbjct: 81 HSGPQERIDLSFLYPSLATPDAPRRVTAESAEDEPRALDRIFLSIAAHHDSLAPDTLVRT 140 Query: 159 IYPRYLD-ERANTDDGLTARAFRDGTPYGGEELFTASEPQLTARCTRDTSTPGMCLSERR 217 IYPRYLD RA +DGL+ AFRDGTPY GE+LF A P L RCTR+ TPGMCLSERR Sbjct: 141 IYPRYLDAARAQAEDGLSMHAFRDGTPYAGEDLFIAQSPALVTRCTREAMTPGMCLSERR 200 Query: 218 IDGADLTFRFPRSWLAQWRDIATAMNRLSAQMHSAK 253 I ADLTFRFPR WL +WRD+A AM RL+ Q+ + Sbjct: 201 IGDADLTFRFPRQWLTRWRDVAGAMERLAQQVRPGQ 236 >ref|YP_577819.1| hypothetical protein Nham_2577 [Nitrobacter hamburgensis X14] gb|ABE63359.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 237 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 151/236 (63%), Positives = 181/236 (76%), Gaps = 1/236 (0%) Query: 19 MTLLSTAQHLARDTRRNPRAHLVPIIASAVIAAGAIALVAYLLWPTYTTIPPSDPSRLPV 78 MTLLS+A +R + + R HL P++A+A+IAA A+ VA+LLWPT+T + RLPV Sbjct: 1 MTLLSSAPRRSRGSVKPRRGHLAPLLAAALIAAPAVTAVAWLLWPTWTPKAFDNNERLPV 60 Query: 79 SVGGTLFNVPTMAVRMKIQRHSGPQERVDLSFLYPSLDAPAAPKHYSADTVEDKVQPIDR 138 S+G TLFNVP A R K+QRHSGPQERVDL+F YPSL AP AP+H +A+T+ED QPIDR Sbjct: 61 SIGETLFNVPQHAFRRKVQRHSGPQERVDLNFAYPSLAAPDAPRHVTAETIEDTPQPIDR 120 Query: 139 IFVSIAAHHDSLAPDMRLRTIYPRYLD-ERANTDDGLTARAFRDGTPYGGEELFTASEPQ 197 IF+SIAAHHDSLAPD+ +RTIYPRYLD R DGL+ AFRDGTPY GE+LF+A P Sbjct: 121 IFLSIAAHHDSLAPDILVRTIYPRYLDATRTQPRDGLSMGAFRDGTPYAGEDLFSADAPA 180 Query: 198 LTARCTRDTSTPGMCLSERRIDGADLTFRFPRSWLAQWRDIATAMNRLSAQMHSAK 253 + ARCTRD TPGMCLSERRI GADLTFRFPR WL +WRD+A AM RL Q+H + Sbjct: 181 MVARCTRDAPTPGMCLSERRIGGADLTFRFPRQWLTEWRDLAGAMERLVQQLHGPQ 236