BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0001.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204987.1| hypothetical protein BRADO2943 [Bradyrhizobi...   184   5e-45
ref|YP_001241124.1| hypothetical protein BBta_5227 [Bradyrhizobi...   182   1e-44
ref|NP_772222.1| hypothetical protein bll5582 [Bradyrhizobium ja...   182   1e-44
ref|YP_533002.1| hypothetical protein RPC_3141 [Rhodopseudomonas...   164   3e-39
ref|YP_570410.1| hypothetical protein RPD_3285 [Rhodopseudomonas...   162   2e-38

>ref|YP_001204987.1| hypothetical protein BRADO2943 [Bradyrhizobium sp. ORS 278]
 emb|CAL76750.1| conserved hypothetical protein; putative membrane protein; putative
           exported protein [Bradyrhizobium sp. ORS 278]
          Length = 109

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 94/109 (86%), Positives = 100/109 (91%)

Query: 1   MSPDTLNSLFSLLIGFALAGALANGYQAMAERPAGFGLLQEGVAPKTFAAVPFLVFAAPF 60
           MS +  NSLFSLLIGFALAGALA+GYQA AERP GF LLQEGV P+ FAAVPFLVFAAPF
Sbjct: 1   MSAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPF 60

Query: 61  IIMRNTLRGARIERRRFEFVMMATVISGFWSLMSGTFFVMTLRAAGVLA 109
           IIMRNTLRGARIERRRFEFVM+ATVI+GFWS+MSGTF VMTLRAAGVLA
Sbjct: 61  IIMRNTLRGARIERRRFEFVMLATVIAGFWSMMSGTFVVMTLRAAGVLA 109


>ref|YP_001241124.1| hypothetical protein BBta_5227 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37218.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 109

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 92/108 (85%), Positives = 100/108 (92%)

Query: 1   MSPDTLNSLFSLLIGFALAGALANGYQAMAERPAGFGLLQEGVAPKTFAAVPFLVFAAPF 60
           MS +  NSLFSLLIGFALAGALA+GYQA +ERPAGF LLQ+GV P+ FAAVPFLVFAAPF
Sbjct: 1   MSAEAFNSLFSLLIGFALAGALASGYQAYSERPAGFELLQQGVTPQRFAAVPFLVFAAPF 60

Query: 61  IIMRNTLRGARIERRRFEFVMMATVISGFWSLMSGTFFVMTLRAAGVL 108
           IIMRNTLRGARIERRRFEFVM+ATVI+GFWS+MSGTF VMTLRAAGVL
Sbjct: 61  IIMRNTLRGARIERRRFEFVMLATVIAGFWSMMSGTFVVMTLRAAGVL 108


>ref|NP_772222.1| hypothetical protein bll5582 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50847.1| bll5582 [Bradyrhizobium japonicum USDA 110]
          Length = 109

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/108 (83%), Positives = 100/108 (92%)

Query: 1   MSPDTLNSLFSLLIGFALAGALANGYQAMAERPAGFGLLQEGVAPKTFAAVPFLVFAAPF 60
           M+P+ LNS FS+ IGFALAGAL NGYQA+A+RPAGFGLLQ+GVAPKTFAAVPFLVFAAPF
Sbjct: 1   MTPEALNSFFSIGIGFALAGALVNGYQAVAQRPAGFGLLQDGVAPKTFAAVPFLVFAAPF 60

Query: 61  IIMRNTLRGARIERRRFEFVMMATVISGFWSLMSGTFFVMTLRAAGVL 108
           IIMRNTLRG R+E RR EFVMMATVI+GFWS+MSGTFF+MTLRA GVL
Sbjct: 61  IIMRNTLRGMRLESRRLEFVMMATVIAGFWSMMSGTFFLMTLRATGVL 108


>ref|YP_533002.1| hypothetical protein RPC_3141 [Rhodopseudomonas palustris BisB18]
 gb|ABD88683.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 131

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 95/109 (87%)

Query: 1   MSPDTLNSLFSLLIGFALAGALANGYQAMAERPAGFGLLQEGVAPKTFAAVPFLVFAAPF 60
           MSP+  N+LFSLL+GFALAGAL +GYQA+A R AGFGLLQ G AP+TFAAVPFLVFAAPF
Sbjct: 23  MSPEVWNNLFSLLVGFALAGALTSGYQALARRQAGFGLLQRGAAPQTFAAVPFLVFAAPF 82

Query: 61  IIMRNTLRGARIERRRFEFVMMATVISGFWSLMSGTFFVMTLRAAGVLA 109
           IIMRNTLR  + +RRR +FVMMATV++GFWS+MSGT  +MTL+A GVLA
Sbjct: 83  IIMRNTLRDRQSQRRRAQFVMMATVLAGFWSMMSGTVLMMTLKALGVLA 131


>ref|YP_570410.1| hypothetical protein RPD_3285 [Rhodopseudomonas palustris BisB5]
 gb|ABE40509.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 109

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/109 (73%), Positives = 93/109 (85%)

Query: 1   MSPDTLNSLFSLLIGFALAGALANGYQAMAERPAGFGLLQEGVAPKTFAAVPFLVFAAPF 60
           MSPD  N+LFSLLIGFA+AGAL +GYQAM  +PAGFGLLQ+GV P +FAAVPFL+FAAPF
Sbjct: 1   MSPDAFNNLFSLLIGFAVAGALTSGYQAMLRQPAGFGLLQQGVVPGSFAAVPFLMFAAPF 60

Query: 61  IIMRNTLRGARIERRRFEFVMMATVISGFWSLMSGTFFVMTLRAAGVLA 109
           IIMRNTL G RIERRR EFVM+ATV++G WS+MSGT  +M L A GV+A
Sbjct: 61  IIMRNTLLGPRIERRRTEFVMLATVLAGTWSMMSGTVLLMVLHAVGVVA 109