BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0021.p (367 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767863.1| phosphonate metabolism protein [Bradyrhizobium ... 664 0.0 ref|YP_570949.1| phosphonate metabolism [Rhodopseudomonas palust... 646 0.0 ref|YP_531165.1| phosphonate metabolism [Rhodopseudomonas palust... 637 0.0 ref|YP_782025.1| phosphonate metabolism [Rhodopseudomonas palust... 637 0.0 ref|YP_001207250.1| putative PhnI protein, phosphonate metabolis... 632 e-179 >ref|NP_767863.1| phosphonate metabolism protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46488.1| phosphonate metabolism protein [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/367 (88%), Positives = 345/367 (94%) Query: 1 MYVAVKGGERAIENAHRLLAHERRGDRDVPEVTLAQISEQLALGVDRVMTEGSLYDRELA 60 MYVAVKGGERAIENAHRLLA+ RRGD+ VPEVTL QISEQL L VDRVM+EGSLYDRELA Sbjct: 1 MYVAVKGGERAIENAHRLLANARRGDQSVPEVTLDQISEQLGLAVDRVMSEGSLYDRELA 60 Query: 61 ALAIKQARGDMIEAIFLVRAFRATLPRFGATEPVNTGEMQVRRRISSTFKDVPGGQILGP 120 ALAIKQARGD+IEAIFLVRAFRATLPRFGA+EPV+TG M+V+RR+SSTFKD+PGGQILGP Sbjct: 61 ALAIKQARGDLIEAIFLVRAFRATLPRFGASEPVDTGAMRVQRRVSSTFKDIPGGQILGP 120 Query: 121 TFDYTHRLLDPQLAEGFVPEQPATAEASQAATPRVTDILGRDGLIEPSPQADSDTPVGDL 180 TFDYTHRLLDP LAEGFVP+ PATAEAS A TPRVTDILGRDGLIE SPQA++ VGDL Sbjct: 121 TFDYTHRLLDPSLAEGFVPDAPATAEASTAPTPRVTDILGRDGLIESSPQAEAGASVGDL 180 Query: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAED 240 TREPL+FPADRD+RLQNLARGDEGFLLA+GYSTQRGYGRNHPFAGEIRFGEVEVEF AED Sbjct: 181 TREPLNFPADRDVRLQNLARGDEGFLLAMGYSTQRGYGRNHPFAGEIRFGEVEVEFLAED 240 Query: 241 AGFAVPLGWIELTECQMVNQFKGSTTEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 GFAVPLG IELTECQMVNQFKGS TEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE Sbjct: 241 VGFAVPLGSIELTECQMVNQFKGSATEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 Query: 301 LGEEAAAPAQDEEFVMSHSDNVQSTGFVEHLKLPHYVDFQSELGLLRKLRQEFAEASAAV 360 LGEEA APAQDEEFVMSHSDNVQ+TGFVEHLKLPHYVDFQSELGLLRKLRQEFAEA+A Sbjct: 301 LGEEALAPAQDEEFVMSHSDNVQATGFVEHLKLPHYVDFQSELGLLRKLRQEFAEANAPD 360 Query: 361 EMQEAAE 367 M+EAAE Sbjct: 361 AMKEAAE 367 >ref|YP_570949.1| phosphonate metabolism [Rhodopseudomonas palustris BisB5] gb|ABE41048.1| phosphonate metabolism [Rhodopseudomonas palustris BisB5] Length = 368 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/368 (86%), Positives = 343/368 (93%), Gaps = 1/368 (0%) Query: 1 MYVAVKGGERAIENAHRLLAHERRGDRDVPEVTLAQISEQLALGVDRVMTEGSLYDRELA 60 MYVAVKGGERAI+NAHRLLAHERRGDR VPEVTLAQISEQLALGVDRVM EGSLYDRELA Sbjct: 1 MYVAVKGGERAIDNAHRLLAHERRGDRAVPEVTLAQISEQLALGVDRVMVEGSLYDRELA 60 Query: 61 ALAIKQARGDMIEAIFLVRAFRATLPRFGATEPVNTGEMQVRRRISSTFKDVPGGQILGP 120 ALAIKQARGD+IEAIFL+RAFRATLPRFGATEPV+TG M VRRR+SSTFKD+PGGQILGP Sbjct: 61 ALAIKQARGDLIEAIFLLRAFRATLPRFGATEPVDTGAMAVRRRVSSTFKDIPGGQILGP 120 Query: 121 TFDYTHRLLDPQLAEGFVPEQPATAEASQAATPRVTDILGRDGLIEPSPQADSDTPVGDL 180 TFDYTHRLLDPQLAE P+QPA A A++ A PRVTDILGRDGLIEPSP++D++ PVGDL Sbjct: 121 TFDYTHRLLDPQLAEHSEPDQPANAPAAKEAMPRVTDILGRDGLIEPSPESDAEAPVGDL 180 Query: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAED 240 TREPL FPADRDLRLQNLARGDEGFLLALGYSTQRGYGR+HPFAGEIRFGEVE+EF AED Sbjct: 181 TREPLDFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED 240 Query: 241 AGFAVPLGWIELTECQMVNQFKGSTTEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 GFAVPLG I LTECQMVNQFKGS TE PCFTRGYGLAFGQSERKTM+MALVDRALRARE Sbjct: 241 IGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRARE 300 Query: 301 LGEEAAAPAQDEEFVMSHSDNVQSTGFVEHLKLPHYVDFQSELGLLRKLRQEFAEASAAV 360 LGEEA APAQDEEFV+SHSDNVQ+TGFVEHLKLPHYVDFQSELGL+R+LRQ+FA A+ Sbjct: 301 LGEEALAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQSELGLVRRLRQDFANAAEQP 360 Query: 361 E-MQEAAE 367 + ++EAAE Sbjct: 361 DALREAAE 368 >ref|YP_531165.1| phosphonate metabolism [Rhodopseudomonas palustris BisB18] gb|ABD86846.1| phosphonate metabolism [Rhodopseudomonas palustris BisB18] Length = 367 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/367 (84%), Positives = 335/367 (91%) Query: 1 MYVAVKGGERAIENAHRLLAHERRGDRDVPEVTLAQISEQLALGVDRVMTEGSLYDRELA 60 MYVAVKGGERAI+NAHRLLAH+RRG+R VPE++L QISEQL+LGVDRVM EGSLYDRELA Sbjct: 1 MYVAVKGGERAIDNAHRLLAHQRRGERAVPEISLEQISEQLSLGVDRVMVEGSLYDRELA 60 Query: 61 ALAIKQARGDMIEAIFLVRAFRATLPRFGATEPVNTGEMQVRRRISSTFKDVPGGQILGP 120 ALAIKQARGD+IEAIFL+RAFRATLPRFG T P++TG M VRRRISSTFKD+PGGQILGP Sbjct: 61 ALAIKQARGDLIEAIFLLRAFRATLPRFGVTLPLDTGAMAVRRRISSTFKDIPGGQILGP 120 Query: 121 TFDYTHRLLDPQLAEGFVPEQPATAEASQAATPRVTDILGRDGLIEPSPQADSDTPVGDL 180 TFDYTHRLLDPQLAE PE PAT + PRVTDILGRDGLIEPSP AD D PVGDL Sbjct: 121 TFDYTHRLLDPQLAESSEPEAPATGVVANEPMPRVTDILGRDGLIEPSPAADDDAPVGDL 180 Query: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAED 240 TREPLSFPA+RDLRLQNLARGDEGFLL+L YS+QRGYGRNHPFAGEIRFGEVE+EFFAED Sbjct: 181 TREPLSFPAERDLRLQNLARGDEGFLLSLAYSSQRGYGRNHPFAGEIRFGEVELEFFAED 240 Query: 241 AGFAVPLGWIELTECQMVNQFKGSTTEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 AGF+VPLG I LTECQMVNQFKGS TEAPCFTRGYGLAFGQSERK M+MALVDRALRARE Sbjct: 241 AGFSVPLGPIALTECQMVNQFKGSATEAPCFTRGYGLAFGQSERKAMAMALVDRALRARE 300 Query: 301 LGEEAAAPAQDEEFVMSHSDNVQSTGFVEHLKLPHYVDFQSELGLLRKLRQEFAEASAAV 360 LGEEA APAQDEEFVMSHSDNVQ+TGFVEHLKLPHYVDFQSELGLLR+LRQ+F + +A Sbjct: 301 LGEEAEAPAQDEEFVMSHSDNVQATGFVEHLKLPHYVDFQSELGLLRRLRQDFEDRAADA 360 Query: 361 EMQEAAE 367 +QEAAE Sbjct: 361 PLQEAAE 367 >ref|YP_782025.1| phosphonate metabolism [Rhodopseudomonas palustris BisA53] gb|ABJ07045.1| phosphonate metabolism [Rhodopseudomonas palustris BisA53] Length = 368 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/368 (85%), Positives = 341/368 (92%), Gaps = 1/368 (0%) Query: 1 MYVAVKGGERAIENAHRLLAHERRGDRDVPEVTLAQISEQLALGVDRVMTEGSLYDRELA 60 MYVAVKGGERAI+NAHRLLAHERRGDR VPE++L+QISEQLALGVDRVM EGSLYDRELA Sbjct: 1 MYVAVKGGERAIDNAHRLLAHERRGDRAVPELSLSQISEQLALGVDRVMVEGSLYDRELA 60 Query: 61 ALAIKQARGDMIEAIFLVRAFRATLPRFGATEPVNTGEMQVRRRISSTFKDVPGGQILGP 120 ALAIKQARGD+IEAIFL+RAFRATLPRFG+TEP++TG M VRRR+SSTFKD+PGGQILGP Sbjct: 61 ALAIKQARGDLIEAIFLLRAFRATLPRFGSTEPLDTGAMAVRRRVSSTFKDIPGGQILGP 120 Query: 121 TFDYTHRLLDPQLAEGFVPEQPATAEASQAATPRVTDILGRDGLIEPSPQADSDTPVGDL 180 TFDYTHRLLDPQLAEG P+QPA+A A A PRVTDILGRDGLIE SP +D PVGDL Sbjct: 121 TFDYTHRLLDPQLAEGHEPDQPASAPAPGEAMPRVTDILGRDGLIESSPAQIADAPVGDL 180 Query: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAED 240 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGR+HPFAGEIRFGEVE+EF AED Sbjct: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED 240 Query: 241 AGFAVPLGWIELTECQMVNQFKGSTTEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 GFAVPLG I LTECQMVNQFKGS TE PCFTRGYGLAFGQSERKTM+MALVDRALRARE Sbjct: 241 VGFAVPLGTIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRARE 300 Query: 301 LGEEAAAPAQDEEFVMSHSDNVQSTGFVEHLKLPHYVDFQSELGLLRKLRQEFAEASAAV 360 LGEEA APAQDEEFV+SHSDNVQ+TGFVEHLKLPHYVDFQSELGL+R+LRQ+FA+A+ Sbjct: 301 LGEEALAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQSELGLVRRLRQDFADAADQP 360 Query: 361 E-MQEAAE 367 + ++EAAE Sbjct: 361 KTLREAAE 368 >ref|YP_001207250.1| putative PhnI protein, phosphonate metabolism [Bradyrhizobium sp. ORS 278] emb|CAL79033.1| putative PhnI protein, phosphonate metabolism [Bradyrhizobium sp. ORS 278] Length = 367 Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust. Identities = 320/367 (87%), Positives = 341/367 (92%) Query: 1 MYVAVKGGERAIENAHRLLAHERRGDRDVPEVTLAQISEQLALGVDRVMTEGSLYDRELA 60 MYVAVKGGERAIENAHRLLAHERRGDR VPE++L+QISEQL L VDRVM+EGSLYDRELA Sbjct: 1 MYVAVKGGERAIENAHRLLAHERRGDRSVPELSLSQISEQLGLAVDRVMSEGSLYDRELA 60 Query: 61 ALAIKQARGDMIEAIFLVRAFRATLPRFGATEPVNTGEMQVRRRISSTFKDVPGGQILGP 120 ALAIKQARGD+IEAIFLVRAFRATLPRFGATEPVNTG M+V+RR+SSTFKD+PGGQ+LGP Sbjct: 61 ALAIKQARGDLIEAIFLVRAFRATLPRFGATEPVNTGGMRVQRRVSSTFKDIPGGQVLGP 120 Query: 121 TFDYTHRLLDPQLAEGFVPEQPATAEASQAATPRVTDILGRDGLIEPSPQADSDTPVGDL 180 TFDYTHRLLDP LA+G PE PA A S PRVTDILG+DGLIEPSP A++D PVGDL Sbjct: 121 TFDYTHRLLDPGLAQGGDPENPALAATSDVPMPRVTDILGQDGLIEPSPAAEADAPVGDL 180 Query: 181 TREPLSFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAED 240 TR+PLSFPA RDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAE+ Sbjct: 181 TRDPLSFPAGRDLRLQNLARGDEGFLLALGYSTQRGYGRNHPFAGEIRFGEVEVEFFAEE 240 Query: 241 AGFAVPLGWIELTECQMVNQFKGSTTEAPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 GFAVPLG IELTECQMVNQFKGS TE PCFTRGYGLAFGQSERKTMSMALVDRALRARE Sbjct: 241 IGFAVPLGSIELTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMSMALVDRALRARE 300 Query: 301 LGEEAAAPAQDEEFVMSHSDNVQSTGFVEHLKLPHYVDFQSELGLLRKLRQEFAEASAAV 360 LGE+ APAQDEEFVMSHSDNVQ+TGFVEHLKLPHYVDFQSELGLLRKLRQEFA+A+AA Sbjct: 301 LGEDVIAPAQDEEFVMSHSDNVQATGFVEHLKLPHYVDFQSELGLLRKLRQEFADANAAP 360 Query: 361 EMQEAAE 367 M+EAAE Sbjct: 361 AMKEAAE 367