BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0017.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774584.1| phosphonates transport system permease protein ... 464 e-129 ref|YP_001241704.1| putative phosphonate ABC transporter membran... 433 e-119 ref|YP_534271.1| phosphonate ABC transporter permease [Rhodopseu... 428 e-118 ref|YP_570945.1| phosphonate ABC transporter permease [Rhodopseu... 415 e-114 ref|YP_001207259.1| putative PhnE protein, phosphonate ABC trans... 410 e-112 >ref|NP_774584.1| phosphonates transport system permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53209.1| phosphonates transport system permease protein [Bradyrhizobium japonicum USDA 110] Length = 282 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 244/281 (86%), Positives = 268/281 (95%) Query: 1 MSQLPKPDTPELRAKYPDAFDRPASARLALPAMIVAAFAIFVFGLVDLDFSPSRLIAGLS 60 M++ + DT ELRA+YPD FDRPASARLA+PAMIVAAFA+ V+GLVDLDFSPSR +AGLS Sbjct: 1 MTRPQEVDTRELRARYPDVFDRPASARLAMPAMIVAAFAVLVYGLVDLDFSPSRFVAGLS 60 Query: 61 QLGWITMLMIPPNPGSSFPLYMQALGETLSIALLGTTLAALLALPVSLLAARNIIPSNLI 120 QLGWI+++MIPP+PGSS P+Y++ALGETLSIALLGTTLAAL ALPVSLLAARN++PSN++ Sbjct: 61 QLGWISLMMIPPDPGSSLPIYLKALGETLSIALLGTTLAALFALPVSLLAARNVVPSNIL 120 Query: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIMVSDFGAFGKLFSEAIEAADRK 180 RFP+RRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAI VSDFGAFGKLFSEAIE AD+K Sbjct: 121 RFPIRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIAVSDFGAFGKLFSEAIEGADQK 180 Query: 181 QVEGIRASGGNPLHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 QVEGIRASGG+ LHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE Sbjct: 181 QVEGIRASGGSALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 Query: 241 QIRVLEWQKVSFLILMILIAVAAIDFISSKLRFAIIGQRAV 281 QIRVLEWQKVSFLILMIL+AVAAIDFIS KLRFAIIG+RAV Sbjct: 241 QIRVLEWQKVSFLILMILVAVAAIDFISGKLRFAIIGRRAV 281 >ref|YP_001241704.1| putative phosphonate ABC transporter membrane protein PhnE [Bradyrhizobium sp. BTAi1] gb|ABQ37798.1| putative PhnE protein, phosphonate ABC transporter, putative membrane protein [Bradyrhizobium sp. BTAi1] Length = 282 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 228/281 (81%), Positives = 258/281 (91%) Query: 1 MSQLPKPDTPELRAKYPDAFDRPASARLALPAMIVAAFAIFVFGLVDLDFSPSRLIAGLS 60 MS+ PD+ ++R +YP+ FDRP SARLA P ++V A AIFVFGLVDL+FSPSR+++GLS Sbjct: 1 MSRQQAPDSQQIRERYPEIFDRPLSARLATPLVLVLALAIFVFGLVDLEFSPSRMLSGLS 60 Query: 61 QLGWITMLMIPPNPGSSFPLYMQALGETLSIALLGTTLAALLALPVSLLAARNIIPSNLI 120 QLGWI +LM+PP+PG+S P+Y++ALGETLSIA+LGTTLAA ALPVSLLAARNIIPS + Sbjct: 61 QLGWIALLMLPPDPGASLPIYLKALGETLSIAVLGTTLAACFALPVSLLAARNIIPSAIF 120 Query: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIMVSDFGAFGKLFSEAIEAADRK 180 RFPVRR D+IRGVDTLIWALVWINVVGLGPFAGVLAI VSDFGA GKLFSEA+E+ADRK Sbjct: 121 RFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAVSDFGALGKLFSEAMESADRK 180 Query: 181 QVEGIRASGGNPLHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 QVEG+RASGG+ LHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE Sbjct: 181 QVEGVRASGGSALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 Query: 241 QIRVLEWQKVSFLILMILIAVAAIDFISSKLRFAIIGQRAV 281 QIRVLEWQ+VSFLILMIL+AVAAID+IS KLRFAIIG+RAV Sbjct: 241 QIRVLEWQRVSFLILMILVAVAAIDWISGKLRFAIIGRRAV 281 >ref|YP_534271.1| phosphonate ABC transporter permease [Rhodopseudomonas palustris BisB18] gb|ABD89952.1| Phosphonate uptake transporter [Rhodopseudomonas palustris BisB18] Length = 282 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 227/282 (80%), Positives = 255/282 (90%) Query: 1 MSQLPKPDTPELRAKYPDAFDRPASARLALPAMIVAAFAIFVFGLVDLDFSPSRLIAGLS 60 MS+ P D L+A+YP F RPAS+RL P +I+AA A+F+FGL +L+FSP R+ AGL+ Sbjct: 1 MSEFPNSDLRGLKARYPAVFARPASSRLGPPTLILAALALFIFGLNELEFSPQRMWAGLN 60 Query: 61 QLGWITMLMIPPNPGSSFPLYMQALGETLSIALLGTTLAALLALPVSLLAARNIIPSNLI 120 QLGW +LMIPP+PGSS Y+ A+GETLSIALLGTTLAA+LALPVSLLAARNI+P+N + Sbjct: 61 QLGWFVLLMIPPDPGSSLMTYLAAMGETLSIALLGTTLAAVLALPVSLLAARNIVPTNFV 120 Query: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIMVSDFGAFGKLFSEAIEAADRK 180 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAI +SDFGAFGKLFSEA E+ADRK Sbjct: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIALSDFGAFGKLFSEAFESADRK 180 Query: 181 QVEGIRASGGNPLHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 QVEG+RASGGN LHEIRFGLLPQVLPVIAGQ+LYFIESNTRSATIIGIVGAGGIGLQLAE Sbjct: 181 QVEGVRASGGNALHEIRFGLLPQVLPVIAGQLLYFIESNTRSATIIGIVGAGGIGLQLAE 240 Query: 241 QIRVLEWQKVSFLILMILIAVAAIDFISSKLRFAIIGQRAVV 282 QIRVLEWQKVSFLILMI++AVAAID ISS+LRFAIIG+RAVV Sbjct: 241 QIRVLEWQKVSFLILMIMVAVAAIDAISSRLRFAIIGRRAVV 282 >ref|YP_570945.1| phosphonate ABC transporter permease [Rhodopseudomonas palustris BisB5] gb|ABE41044.1| Phosphonate uptake transporter [Rhodopseudomonas palustris BisB5] Length = 282 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/281 (79%), Positives = 257/281 (91%) Query: 1 MSQLPKPDTPELRAKYPDAFDRPASARLALPAMIVAAFAIFVFGLVDLDFSPSRLIAGLS 60 M+ +PD L+A+YP+ F PA++RL +PA+ +AA A+ +FGL++LDFSP R+ AGLS Sbjct: 1 MTNQMRPDLETLKARYPETFGPPAASRLGVPAIALAALALLIFGLIELDFSPQRIWAGLS 60 Query: 61 QLGWITMLMIPPNPGSSFPLYMQALGETLSIALLGTTLAALLALPVSLLAARNIIPSNLI 120 QLGWIT+LM+PP+PGSS P Y+ A+GETLSIALLGTTLAA++ALPVSLLAARN++P+ I Sbjct: 61 QLGWITLLMVPPDPGSSLPAYLAAMGETLSIALLGTTLAAVIALPVSLLAARNVVPTQFI 120 Query: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIMVSDFGAFGKLFSEAIEAADRK 180 RFPVRRFLD IRGVDTLIWALVWINVVGLGPFAGVLAI V+DFGAFGKLFSEAIE ADRK Sbjct: 121 RFPVRRFLDGIRGVDTLIWALVWINVVGLGPFAGVLAIAVADFGAFGKLFSEAIETADRK 180 Query: 181 QVEGIRASGGNPLHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 +VEG+RASGG+ LHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE Sbjct: 181 EVEGVRASGGSALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 Query: 241 QIRVLEWQKVSFLILMILIAVAAIDFISSKLRFAIIGQRAV 281 QIRVLEWQKVSFLILMILIAVAAID+IS++LRFAIIG+RA+ Sbjct: 241 QIRVLEWQKVSFLILMILIAVAAIDWISNRLRFAIIGRRAI 281 >ref|YP_001207259.1| putative PhnE protein, phosphonate ABC transporter membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL79042.1| putative PhnE protein, phosphonate ABC transporter, putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 282 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/281 (80%), Positives = 253/281 (90%) Query: 1 MSQLPKPDTPELRAKYPDAFDRPASARLALPAMIVAAFAIFVFGLVDLDFSPSRLIAGLS 60 MS PD +LR +YP F+RP SARLA P +++ A A+FVFGLVDLDFSPSR+++GL Sbjct: 1 MSLPDTPDPTQLRERYPHIFNRPMSARLATPLVLLLALAVFVFGLVDLDFSPSRILSGLG 60 Query: 61 QLGWITMLMIPPNPGSSFPLYMQALGETLSIALLGTTLAALLALPVSLLAARNIIPSNLI 120 QLGWI LM+PP+PG S P+Y++ALGETLSIA+LGTTLAA LA PVSLLAARN+IPS + Sbjct: 61 QLGWIARLMLPPDPGGSLPVYLKALGETLSIAVLGTTLAACLAFPVSLLAARNVIPSAIF 120 Query: 121 RFPVRRFLDSIRGVDTLIWALVWINVVGLGPFAGVLAIMVSDFGAFGKLFSEAIEAADRK 180 RFPVRR D+IRGVDTLIWALVWINVVGLGPFAGVLAI VSDFGA GKLFSEA+E+ADRK Sbjct: 121 RFPVRRLFDTIRGVDTLIWALVWINVVGLGPFAGVLAIAVSDFGALGKLFSEAMESADRK 180 Query: 181 QVEGIRASGGNPLHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 QVEG+RA+GGN LHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE Sbjct: 181 QVEGVRAAGGNALHEIRFGLLPQVLPVIAGQVLYFIESNTRSATIIGIVGAGGIGLQLAE 240 Query: 241 QIRVLEWQKVSFLILMILIAVAAIDFISSKLRFAIIGQRAV 281 QIRVLEWQKVSFLILMIL+AVAAID+IS++LRFAIIG+RAV Sbjct: 241 QIRVLEWQKVSFLILMILVAVAAIDWISNRLRFAIIGRRAV 281