BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0015.p (595 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207261.1| putative PhnD protein, phosphonate ABC trans... 577 e-162 ref|YP_001241706.1| putative phosphonate ABC transporter exporte... 568 e-160 ref|YP_570943.1| phosphonate-binding periplasmic protein [Rhodop... 547 e-153 ref|NP_774586.1| phosphonates-binding periplasmic protein [Brady... 541 e-151 ref|YP_534273.1| phosphonate-binding periplasmic protein [Rhodop... 536 e-150 >ref|YP_001207261.1| putative PhnD protein, phosphonate ABC transporter exported protein [Bradyrhizobium sp. ORS 278] emb|CAL79044.1| putative PhnD protein, phosphonate ABC transporter, putative exported protein [Bradyrhizobium sp. ORS 278] Length = 310 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 280/308 (90%), Positives = 291/308 (94%) Query: 285 MITRRIVLAGAAVLAFTGSAFAQDWKAKYPELTFAVVPAENASGVTERWTPFVAYLSKEL 344 MI RRIVLAG A LAFT A A+DWKAKYPELTFAVVPAENASGVTERWTPFV YLSKEL Sbjct: 1 MINRRIVLAGVAALAFTAQASAEDWKAKYPELTFAVVPAENASGVTERWTPFVNYLSKEL 60 Query: 345 GVKVTLRIANDYAAVIEGQRAGNIQIASYGSASFARARLTGVKTDAFANDINADGSTGYY 404 GVKVTLRIANDYAAVIEGQRAGNI IASYGSASFARARLTGVKTDAFANDINADGSTGYY Sbjct: 61 GVKVTLRIANDYAAVIEGQRAGNIHIASYGSASFARARLTGVKTDAFANDINADGSTGYY 120 Query: 405 SVFFVKASSPSKSVDDLKGKNLGLVDPNSTSGNNVPRFELDKMGIHDADTYFGKVVFTGS 464 SVFFVKA+SP K V+DLKGKNLGLVDPNSTSGNNVPRFEL+KMG+ DA+ YFGKVVFTGS Sbjct: 121 SVFFVKANSPYKKVEDLKGKNLGLVDPNSTSGNNVPRFELNKMGVTDAEAYFGKVVFTGS 180 Query: 465 HENAVLALAQGTVDMAANQWTSDDDSTLAQMLHKGMLKNADGSAMKKDDFRIIHKSAPII 524 HENAVLAL+QGTVD+AANQWTSD+DSTLAQML KGMLKNADGS MKKDDFRIIHKSAPII Sbjct: 181 HENAVLALSQGTVDVAANQWTSDNDSTLAQMLTKGMLKNADGSPMKKDDFRIIHKSAPII 240 Query: 525 NGPYAYNADLPEDLKAAIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIELIK 584 NGPYAYN DLPED K AIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTI+LIK Sbjct: 241 NGPYAYNTDLPEDAKQAIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIDLIK 300 Query: 585 FVDNLRKK 592 FVD+LRKK Sbjct: 301 FVDSLRKK 308 >ref|YP_001241706.1| putative phosphonate ABC transporter exported protein PhnD [Bradyrhizobium sp. BTAi1] gb|ABQ37800.1| putative PhnD protein, phosphonate ABC transporter, putative exported protein [Bradyrhizobium sp. BTAi1] Length = 310 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 290/308 (94%) Query: 285 MITRRIVLAGAAVLAFTGSAFAQDWKAKYPELTFAVVPAENASGVTERWTPFVAYLSKEL 344 MI RRIVLAG A LAFT SA A+DW+AKYPELTFAV+PAENASGVTERWTPFV YLSKEL Sbjct: 1 MINRRIVLAGVAALAFTASASAEDWRAKYPELTFAVIPAENASGVTERWTPFVNYLSKEL 60 Query: 345 GVKVTLRIANDYAAVIEGQRAGNIQIASYGSASFARARLTGVKTDAFANDINADGSTGYY 404 G KVTLRIANDYAAVIEGQRAGNI IASYGSASFARARLTGVK DAFANDINADGSTGYY Sbjct: 61 GTKVTLRIANDYAAVIEGQRAGNIHIASYGSASFARARLTGVKIDAFANDINADGSTGYY 120 Query: 405 SVFFVKASSPSKSVDDLKGKNLGLVDPNSTSGNNVPRFELDKMGIHDADTYFGKVVFTGS 464 SVFFVKA+SP + V+DLKGKNLGLVDPNSTSGNNVPRFEL+KMGI +AD YF KVVFTGS Sbjct: 121 SVFFVKANSPYQKVEDLKGKNLGLVDPNSTSGNNVPRFELNKMGITNADGYFSKVVFTGS 180 Query: 465 HENAVLALAQGTVDMAANQWTSDDDSTLAQMLHKGMLKNADGSAMKKDDFRIIHKSAPII 524 HENA+LALAQGTVD+AANQWTSD+DSTLAQML KGMLKNADGS MKKDDFRIIHKSAPII Sbjct: 181 HENAILALAQGTVDVAANQWTSDNDSTLAQMLTKGMLKNADGSPMKKDDFRIIHKSAPII 240 Query: 525 NGPYAYNADLPEDLKAAIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIELIK 584 NGPYAYNADLPE+ K AIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTI+LIK Sbjct: 241 NGPYAYNADLPEEAKQAIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIDLIK 300 Query: 585 FVDNLRKK 592 FVD+LRKK Sbjct: 301 FVDSLRKK 308 >ref|YP_570943.1| phosphonate-binding periplasmic protein [Rhodopseudomonas palustris BisB5] gb|ABE41042.1| Phosphonate-binding periplasmic protein [Rhodopseudomonas palustris BisB5] Length = 313 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 261/289 (90%), Positives = 280/289 (96%) Query: 307 QDWKAKYPELTFAVVPAENASGVTERWTPFVAYLSKELGVKVTLRIANDYAAVIEGQRAG 366 QD+K+KYPELTFAVVPAENASGVTERW+PFVAYLSKELGVKV LRIANDYAAVIEGQRAG Sbjct: 25 QDYKSKYPELTFAVVPAENASGVTERWSPFVAYLSKELGVKVNLRIANDYAAVIEGQRAG 84 Query: 367 NIQIASYGSASFARARLTGVKTDAFANDINADGSTGYYSVFFVKASSPSKSVDDLKGKNL 426 NIQ+ASYGSASFARARLTGVKT+AFANDIN DGSTGYYSVFFVKASSP KS+D++KGKNL Sbjct: 85 NIQLASYGSASFARARLTGVKTEAFANDINKDGSTGYYSVFFVKASSPYKSIDEMKGKNL 144 Query: 427 GLVDPNSTSGNNVPRFELDKMGIHDADTYFGKVVFTGSHENAVLALAQGTVDMAANQWTS 486 GLVDPNSTSGNNVPRFELDKMGI DA+ YFGKVVFTGSHENA+LALAQGTVD+AANQWT+ Sbjct: 145 GLVDPNSTSGNNVPRFELDKMGISDAEGYFGKVVFTGSHENAILALAQGTVDIAANQWTN 204 Query: 487 DDDSTLAQMLHKGMLKNADGSAMKKDDFRIIHKSAPIINGPYAYNADLPEDLKAAIAKAF 546 D+DSTLAQML+KGMLKNADGSAMKK+DFRI+HKSAP+INGPYAYNADLPEDLKAAIAKAF Sbjct: 205 DNDSTLAQMLNKGMLKNADGSAMKKEDFRIVHKSAPVINGPYAYNADLPEDLKAAIAKAF 264 Query: 547 FDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIELIKFVDNLRKKKAS 595 DAPTK KAAFDRLSDGQK+GFH ATTKDWDGTIELI+FVD LRKKKAS Sbjct: 265 LDAPTKGKAAFDRLSDGQKQGFHAATTKDWDGTIELIRFVDALRKKKAS 313 >ref|NP_774586.1| phosphonates-binding periplasmic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53211.1| phosphonates-binding periplasmic protein precursor [Bradyrhizobium japonicum USDA 110] Length = 311 Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust. Identities = 285/311 (91%), Positives = 294/311 (94%) Query: 285 MITRRIVLAGAAVLAFTGSAFAQDWKAKYPELTFAVVPAENASGVTERWTPFVAYLSKEL 344 MITRR+VLAGAA LAFT SA A DWKAKY ELTFAV+PAENASGVTERW PF++YLSKEL Sbjct: 1 MITRRLVLAGAAALAFTTSASADDWKAKYSELTFAVIPAENASGVTERWAPFMSYLSKEL 60 Query: 345 GVKVTLRIANDYAAVIEGQRAGNIQIASYGSASFARARLTGVKTDAFANDINADGSTGYY 404 GVKVTLRIANDYAAVIEGQRAGNI IASYGSASFARARLTGVKTDAFANDINADGSTGYY Sbjct: 61 GVKVTLRIANDYAAVIEGQRAGNIHIASYGSASFARARLTGVKTDAFANDINADGSTGYY 120 Query: 405 SVFFVKASSPSKSVDDLKGKNLGLVDPNSTSGNNVPRFELDKMGIHDADTYFGKVVFTGS 464 SVFFVKASSP KS+D LKGKNLGLVDPNSTSGNNVPRFELDKMGI DADTYF KVVFTGS Sbjct: 121 SVFFVKASSPYKSIDQLKGKNLGLVDPNSTSGNNVPRFELDKMGIADADTYFSKVVFTGS 180 Query: 465 HENAVLALAQGTVDMAANQWTSDDDSTLAQMLHKGMLKNADGSAMKKDDFRIIHKSAPII 524 HENA+LALAQGTVD+AANQWTSDDDSTLAQML KGMLKNADGS MKKDDFRIIHKSAPII Sbjct: 181 HENAILALAQGTVDVAANQWTSDDDSTLAQMLTKGMLKNADGSPMKKDDFRIIHKSAPII 240 Query: 525 NGPYAYNADLPEDLKAAIAKAFFDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIELIK 584 NGPYAYN+DLPE+ KAAIAKAFFDAP KDKAAFDRL DGQKKGFHPATTKDWDGTIELIK Sbjct: 241 NGPYAYNSDLPEEAKAAIAKAFFDAPAKDKAAFDRLQDGQKKGFHPATTKDWDGTIELIK 300 Query: 585 FVDNLRKKKAS 595 FVD LRKKKAS Sbjct: 301 FVDALRKKKAS 311 >ref|YP_534273.1| phosphonate-binding periplasmic protein [Rhodopseudomonas palustris BisB18] gb|ABD89954.1| Phosphonate-binding periplasmic protein [Rhodopseudomonas palustris BisB18] Length = 312 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 257/289 (88%), Positives = 274/289 (94%) Query: 307 QDWKAKYPELTFAVVPAENASGVTERWTPFVAYLSKELGVKVTLRIANDYAAVIEGQRAG 366 QD+K KYPELTFAVVPAENASGVTERWTPFVAYLSKELGVKV LRIANDYAAVIEGQR+G Sbjct: 24 QDYKTKYPELTFAVVPAENASGVTERWTPFVAYLSKELGVKVNLRIANDYAAVIEGQRSG 83 Query: 367 NIQIASYGSASFARARLTGVKTDAFANDINADGSTGYYSVFFVKASSPSKSVDDLKGKNL 426 NIQ+ASYGSASFARARLTGVKTDAFANDIN DGSTGYYSVFFV A +P KS+DDLKGKNL Sbjct: 84 NIQLASYGSASFARARLTGVKTDAFANDINVDGSTGYYSVFFVNAKTPFKSIDDLKGKNL 143 Query: 427 GLVDPNSTSGNNVPRFELDKMGIHDADTYFGKVVFTGSHENAVLALAQGTVDMAANQWTS 486 GLVDPNSTSGNNVPRFELDK+GI DA+ YFGKVVFTGSHENA+LALAQGTV++AANQWT+ Sbjct: 144 GLVDPNSTSGNNVPRFELDKLGISDAEAYFGKVVFTGSHENALLALAQGTVEVAANQWTN 203 Query: 487 DDDSTLAQMLHKGMLKNADGSAMKKDDFRIIHKSAPIINGPYAYNADLPEDLKAAIAKAF 546 +DDSTLAQMLHK MLK+ADG+ KKD+FRIIHKSAPIINGPYAYN+DLP DLKAAIAKAF Sbjct: 204 EDDSTLAQMLHKNMLKHADGTPFKKDEFRIIHKSAPIINGPYAYNSDLPADLKAAIAKAF 263 Query: 547 FDAPTKDKAAFDRLSDGQKKGFHPATTKDWDGTIELIKFVDNLRKKKAS 595 DAP+KDKAAFDRLSDGQKKGFH ATTKDWDGTIELIKFVD LRKKKAS Sbjct: 264 MDAPSKDKAAFDRLSDGQKKGFHTATTKDWDGTIELIKFVDALRKKKAS 312