BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0010.p (415 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01625956.1| hypothetical protein MGP2080_02086 [marine ga... 372 e-101 ref|YP_662193.1| Rieske (2Fe-2S) domain-containing protein [Pseu... 364 2e-98 ref|ZP_05127162.1| rieske (2Fe-2S) domain protein [gamma proteob... 363 3e-98 ref|ZP_05074057.1| hypothetical protein RB2083_1232 [Rhodobacter... 358 1e-96 ref|ZP_01618413.1| Rieske (2Fe-2S) protein [marine gamma proteob... 353 3e-95 >ref|ZP_01625956.1| hypothetical protein MGP2080_02086 [marine gamma proteobacterium HTCC2080] gb|EAW41475.1| hypothetical protein MGP2080_02086 [marine gamma proteobacterium HTCC2080] Length = 387 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/371 (49%), Positives = 239/371 (64%), Gaps = 4/371 (1%) Query: 41 TAQLADEASIVDRILRHIDAKSTDLSDGIWHEPVAHYLAQDRFAAEIEHVFRRTLTPFCP 100 T L E ++RI +HID ++TDL D +W EPVAHY +Q+RF AE+ + R++ PFCP Sbjct: 17 TLPLLSEQETIERIFQHIDNRTTDLGDTVWQEPVAHYHSQERFDAEL-LLLRQSPIPFCP 75 Query: 101 SAALAEIGAYVARDAALTPVVAIRGADGVARAFRNACRHRGVQLVDGAGCKKALTCRYHG 160 SAAL E G+YVAR A+ TP++ RG DGVARAF NACRHRG+Q+ G GC+K +C YH Sbjct: 76 SAALPENGSYVARSASGTPLLVARGNDGVARAFINACRHRGMQVASGQGCQKNFSCPYHA 135 Query: 161 WTYGLDGRLRRIPDDYGFPGLDKDTHGLVPVTCIERDGLVFVSQDDPAATSEAGGMPTLF 220 WTYGLDG L+ IP FPGLDK HGLV V+ E GL++V Q + P F Sbjct: 136 WTYGLDGALKGIPGQAAFPGLDKQEHGLVEVSAREFGGLIYVQQIGQISDEALSDKPHFF 195 Query: 221 GDDWKLYATTAQEVEANWKIVAEGFLEGYHIRSTHQDTFYPLQYDNLNVIEPFGRNSRIS 280 D + + ANWK++ E LEGYHI+S HQ+TFYP DN+NV+E FG N+R+ Sbjct: 196 TPDQVCFDQSEVADNANWKLITETLLEGYHIKSLHQETFYPFGLDNINVVEVFGANARVV 255 Query: 281 FPYRRIEKLRNVPPGERRTAGMLTHVYHLFPNVMLSTFPTNRLMTVLEPLAVDRTRLVTY 340 FP++RIEKLR++ P +R+ GM+T VYHLFPN +S + +T++EPL+ RTRLV+Y Sbjct: 256 FPFKRIEKLRDLAPEDRKLDGMVTSVYHLFPNASVSLLSKHASLTIMEPLSPTRTRLVSY 315 Query: 341 TLSNQIAAEDGRTAVAQGRD--FV-TAGAAEDREMACAAQRGLATRANAQFTFGLFEGAI 397 + N + T A RD FV AG EDR ACA Q ++T AN TFG FE AI Sbjct: 316 YVMNSSTDDRPITLEAAQRDVEFVNNAGQVEDRAAACAIQETVSTPANPHLTFGYFEKAI 375 Query: 398 RHFHQNLAAII 408 +FHQ LA I Sbjct: 376 VNFHQQLAQKI 386 >ref|YP_662193.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas atlantica T6c] gb|ABG41139.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c] Length = 384 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 184/375 (49%), Positives = 245/375 (65%), Gaps = 5/375 (1%) Query: 44 LADEASIVDRILRHIDAKSTDLSDGIWHEPVAHYLAQDRFAAEIEHVFRRTLTPFCPSAA 103 L + +V RI HID +TDL W EP A+Y ++ R AE++ + R++ FCPS+A Sbjct: 11 LLTDIEVVQRIFAHIDNSTTDLGKQSWREPTANYRSKARLEAELDILQSRSIV-FCPSSA 69 Query: 104 LAEIGAYVARDAALTPVVAIRGADGVARAFRNACRHRGVQLVDGAGCKKALTCRYHGWTY 163 LA+IG YVARDAA P++A+RG DGV RAFRNACRHRGV+L +G GC +AL C YHGW Y Sbjct: 70 LAKIGDYVARDAATVPLIAVRGLDGVIRAFRNACRHRGVKLAEGQGCARALVCPYHGWAY 129 Query: 164 GLDGRLRRIPDDYGFPGLDKDTHGLVPVTCIERDGLVFVSQDDPAATSEA--GGMPTLFG 221 L+G L IP + GFP +DK T GLV V C E +GLVF++Q +P A E +P L Sbjct: 130 NLNGSLLSIPHEDGFPDVDKATRGLVEVACFESNGLVFINQ-NPQANIEQDIAPIPHLIP 188 Query: 222 DDWKLYATTAQEVEANWKIVAEGFLEGYHIRSTHQDTFYPLQYDNLNVIEPFGRNSRISF 281 + ++L +T Q V+ANWK+ E LEGYHIR TH+ TF+P+QYDNL VIE FG NSR++F Sbjct: 189 EHYRLLNSTRQVVKANWKLYLESSLEGYHIRQTHKRTFFPVQYDNLTVIEAFGENSRVTF 248 Query: 282 PYRRIEKLRNVPPGERRTAGMLTHVYHLFPNVMLSTFPTNRLMTVLEPLAVDRTRLVTYT 341 PY+ IE LR+ + G LT+VYHLFPNV++STFP + VLEP+ T TY Sbjct: 249 PYQAIEGLRHNKASDISVDGRLTYVYHLFPNVVISTFPGCMQVNVLEPIDEATTEQHTYL 308 Query: 342 LSNQIAAEDGRT-AVAQGRDFVTAGAAEDREMACAAQRGLATRANAQFTFGLFEGAIRHF 400 +S + R A+++G++F GA ED ++ +AQ+GLA+ AN FGLFE AI Sbjct: 309 ISAIGEHDTARLDAISEGQEFAAKGAVEDLQIVLSAQKGLASEANEFLEFGLFESAIVRL 368 Query: 401 HQNLAAIIESRTGAR 415 H +LA E + A+ Sbjct: 369 HTHLAKEFERVSKAK 383 >ref|ZP_05127162.1| rieske (2Fe-2S) domain protein [gamma proteobacterium NOR5-3] gb|EED33709.1| rieske (2Fe-2S) domain protein [gamma proteobacterium NOR5-3] Length = 372 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 174/365 (47%), Positives = 232/365 (63%), Gaps = 4/365 (1%) Query: 44 LADEASIVDRILRHIDAKSTDLSDGIWHEPVAHYLAQDRFAAEIEHVFRRTLTPFCPSAA 103 L +E + +RI HID K+TDL D +W EPVA YL+Q+RF AEI + RR FCPS Sbjct: 4 LLNEQQVTERIFSHIDNKTTDLGDTVWKEPVASYLSQERFEAEIA-MLRRMPVAFCPSVM 62 Query: 104 LAEIGAYVARDAALTPVVAIRGADGVARAFRNACRHRGVQLVDGAGCKKALTCRYHGWTY 163 L+E G+YVAR AA TP++ +RG DG RAF N CRHRG+ + +GC ++ C YH WTY Sbjct: 63 LSEKGSYVARKAAGTPLLVVRGEDGQIRAFINGCRHRGMPVAKDSGCARSFVCPYHAWTY 122 Query: 164 GLDGRLRRIPDDYGFPGLDKDTHGLVPVTCIERDGLVFVSQDDPAATSEAGGMPTLFGDD 223 GLDG+LR+IP GFPG++ +GLV V E+ GLV+V+Q P MP F D+ Sbjct: 123 GLDGKLRQIPGREGFPGVELHENGLVEVAAREKGGLVYVNQSGPIDEESLKNMPEFFSDE 182 Query: 224 WKLYATTAQEVEANWKIVAEGFLEGYHIRSTHQDTFYPLQYDNLNVIEPFGRNSRISFPY 283 + + + E+NWK++AE +EGYHI+S H+ +FYP DN NV+E FG NSR+ FP+ Sbjct: 183 QQFFDQSDYSDESNWKLIAETTMEGYHIKSLHKQSFYPYGLDNTNVVETFGANSRVIFPF 242 Query: 284 RRIEKLRNVPPGERRTAGMLTHVYHLFPNVMLSTFPTNRLMTVLEPLAVDRTRLVTYTLS 343 +RIEKLR++ P +R GMLT VY LFPNV +S + +T+ EPL+ RT+++ Y ++ Sbjct: 243 KRIEKLRDIEPQKRSLDGMLTSVYQLFPNVAVSVLSKHSTVTIFEPLSPSRTQILIYRVT 302 Query: 344 NQIAAEDGRTAVAQGRDFV---TAGAAEDREMACAAQRGLATRANAQFTFGLFEGAIRHF 400 N+ + RD V AG EDRE AC+ Q L AN TFG FE AI HF Sbjct: 303 NRTSDGSIVDFDEAMRDAVFVKAAGFDEDREAACSIQETLGAGANQHLTFGYFEKAIVHF 362 Query: 401 HQNLA 405 H+NLA Sbjct: 363 HKNLA 367 >ref|ZP_05074057.1| hypothetical protein RB2083_1232 [Rhodobacterales bacterium HTCC2083] gb|EDZ41717.1| hypothetical protein RB2083_1232 [Rhodobacteraceae bacterium HTCC2083] Length = 388 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/368 (48%), Positives = 235/368 (63%), Gaps = 7/368 (1%) Query: 44 LADEASIVDRILRHIDAKSTDLSDGIWHEPVAHYLAQDRFAAEIEHVFRRTLTPFCPSAA 103 L + +V +I HID K+TDL W EPV++Y +Q+R AE+ + + + FCPS A Sbjct: 18 LLNTQEMVLQIFNHIDNKTTDLGAETWSEPVSNYRSQERLDAELG-LIKSSFVVFCPSLA 76 Query: 104 LAEIGAYVARDAALTPVVAIRGADGVARAFRNACRHRGVQLVDGAGCKKALTCRYHGWTY 163 L+ G YVAR AA P++A+R DG A+ FRNACRHRGVQL G GCK+ L C YHGW Y Sbjct: 77 LSNTGDYVARSAAGVPLIAVRAEDGTAKVFRNACRHRGVQLAQGHGCKRVLVCPYHGWAY 136 Query: 164 GLDGRLRRIPDDYGFPGLDKDTHGLVPVTCIERDGLVFVSQDDPAAT-SEAGGMPTLFGD 222 LDG+L+ I GFP +D T GLVPV E +GLV+V Q+ T S +P + D Sbjct: 137 ALDGQLKNITHGSGFPEVDTKTSGLVPVPSKEINGLVYVGQEASDTTASSLDLIPQIIPD 196 Query: 223 DWKLYATTAQEVEANWKIVAEGFLEGYHIRSTHQDTFYPLQYDNLNVIEPFGRNSRISFP 282 +++L +V+ANWK+ E LEGYHIR+TH TF+P+QYDNL V+E FG NSR++FP Sbjct: 197 NYELVEIDEMDVDANWKLFIESALEGYHIRATHTKTFFPVQYDNLTVVEAFGGNSRVTFP 256 Query: 283 YRRIEKLRNVPPGERRTAGMLTHVYHLFPNVMLSTFPTNRLMTVLEPLAVDRTRLVTYTL 342 Y+ IE LRN P T G +T +YHLFPNV++STFP + VLEPL +++TR TY L Sbjct: 257 YQTIESLRNKPQKGWSTNGRMTQLYHLFPNVIVSTFPNCLQVVVLEPLGLEKTRQHTYLL 316 Query: 343 SNQI--AAEDGRT---AVAQGRDFVTAGAAEDREMACAAQRGLATRANAQFTFGLFEGAI 397 AE+ +T ++ QG+ F GA EDRE+ +AQ+GL + AN TFGLFE AI Sbjct: 317 GRVATGTAEERKTMTESILQGQAFAKTGAIEDREVVMSAQQGLHSGANEHLTFGLFESAI 376 Query: 398 RHFHQNLA 405 H L+ Sbjct: 377 GRLHAGLS 384 >ref|ZP_01618413.1| Rieske (2Fe-2S) protein [marine gamma proteobacterium HTCC2143] gb|EAW29761.1| Rieske (2Fe-2S) protein [marine gamma proteobacterium HTCC2143] Length = 379 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 175/370 (47%), Positives = 237/370 (64%), Gaps = 4/370 (1%) Query: 44 LADEASIVDRILRHIDAKSTDLSDGIWHEPVAHYLAQDRFAAEIEHVFRRTLTPFCPSAA 103 L E+SI+ RI HID K+TDL D +W EPVA+YL+ +RF AEIE + R +C SA Sbjct: 11 LLSESSIIARIFDHIDNKTTDLGDTVWKEPVANYLSDERFNAEIE-LLRSLPVVYCLSAM 69 Query: 104 LAEIGAYVARDAALTPVVAIRGADGVARAFRNACRHRGVQLVDGAGCKKALTCRYHGWTY 163 L + G+YVAR AA +P++ +RG DG RAF N CRHRG+Q+ +GC ++ C YH WTY Sbjct: 70 LPDKGSYVARRAAGSPLLVVRGDDGKVRAFINGCRHRGMQVAKDSGCARSFVCPYHAWTY 129 Query: 164 GLDGRLRRIPDDYGFPGLDKDTHGLVPVTCIERDGLVFVSQDDPAATSEAGGMPTLFGDD 223 GLDG LR IP GFPG+D +GLV V +E+ GLV+V+Q P ++ +P LFG Sbjct: 130 GLDGELRHIPGKTGFPGVDLQENGLVEVGALEQGGLVYVNQSGPIDSTMLEDVPDLFGSQ 189 Query: 224 WKLYATTAQEVEANWKIVAEGFLEGYHIRSTHQDTFYPLQYDNLNVIEPFGRNSRISFPY 283 + + EANWK++AE +EGYHIRS H+ +F+P DN+ ++E FG +SR+ FP+ Sbjct: 190 QVFFDQSEYTDEANWKLLAETTMEGYHIRSLHKKSFFPYGLDNITLVENFGVHSRVIFPF 249 Query: 284 RRIEKLRNVPPGERRTAGMLTHVYHLFPNVMLSTFPTNRLMTVLEPLAVDRTRLVTYTLS 343 +RIEKLR++ P ++R GM+T VY LFPNV +S + +T+ EPL+ RT+++ Y + Sbjct: 250 KRIEKLRDIEPKDQRLDGMITSVYQLFPNVAVSVLSKHSTVTIFEPLSPTRTQMLIYRAT 309 Query: 344 NQIAAEDGRTAVAQGRD--FVT-AGAAEDREMACAAQRGLATRANAQFTFGLFEGAIRHF 400 N + RD FV AG EDRE ACA Q L T+AN TFG FE AI HF Sbjct: 310 NLTSDGVSTDIDDAKRDAGFVKDAGFDEDREAACAIQGTLGTKANQHLTFGHFEKAIAHF 369 Query: 401 HQNLAAIIES 410 H+NLA + S Sbjct: 370 HKNLAQHLSS 379