BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0004.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002540162.1| translation initiation inhibitor, putative [... 185 2e-45 ref|YP_003944055.1| TdcF protein [Ketogulonicigenium vulgare Y25... 168 3e-40 ref|YP_365270.1| putative endoribonuclease L-PSP [Xanthomonas ca... 166 1e-39 ref|ZP_06489114.1| putative endoribonuclease L-PSP [Xanthomonas ... 165 2e-39 ref|YP_004852856.1| translation initiation inhibitor [Xanthomona... 165 3e-39 >ref|XP_002540162.1| translation initiation inhibitor, putative [Ricinus communis] gb|EEF22220.1| translation initiation inhibitor, putative [Ricinus communis] Length = 164 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/139 (66%), Positives = 111/139 (79%), Gaps = 2/139 (1%) Query: 23 VVRHPIPNSTFPIAQAVTVTGNTTTVYVSGQVPPVINKDADPSSPPAYGDTKTQTVGVLN 82 +VRH IP+S FPIAQAVT+ TT ++SGQVPPV++K ADP+S A+GDTKTQTVGVL Sbjct: 25 IVRHKIPDSDFPIAQAVTLPPGTTIHFISGQVPPVVDKAADPNSSAAFGDTKTQTVGVLT 84 Query: 83 RIKTILEGQGLGMGDVVKMQVFLVHN--ASAPMDFKAFMEGYTQFFGGSQPNLPARSVVG 140 +IK IL+G GL MGDVVKMQVFLV + + D FM GYTQFFGG+QPNLPAR+VV Sbjct: 85 KIKEILQGMGLAMGDVVKMQVFLVGDPGKNGRADVAGFMAGYTQFFGGAQPNLPARAVVQ 144 Query: 141 VAALANPGFLVEIEVIAAK 159 VA L+NPG+ VEIEV+AAK Sbjct: 145 VAGLSNPGWFVEIEVVAAK 163 >ref|YP_003944055.1| TdcF protein [Ketogulonicigenium vulgare Y25] gb|ADO44016.1| TdcF protein [Ketogulonicigenium vulgare Y25] gb|AEM42542.1| Endoribonuclease L-PSP superfamily protein [Ketogulonigenium vulgarum WSH-001] Length = 161 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/160 (55%), Positives = 112/160 (70%), Gaps = 2/160 (1%) Query: 1 MKFIGIALGAALSAMATAASADVVRHPIPNSTFPIAQAVTVTGNTTTVYVSGQVPPVINK 60 MK + +A AL A A+A+V+RH P STFPI +AV + + T VY+SG VP V N+ Sbjct: 1 MKTLAVAAAIAL-GFAGTATAEVIRHTTPGSTFPILRAVEIPPDATLVYLSGVVPGVTNE 59 Query: 61 DADPSSPPAYGDTKTQTVGVLNRIKTILEGQGLGMGDVVKMQVFLVHNASAPMDFKAFME 120 A P++P A+GDT+ QTV VLNRI L G+ MGDVVKMQV+LV + S MDF+ FM+ Sbjct: 60 AAAPNTPEAFGDTEAQTVSVLNRITANLTDLGMTMGDVVKMQVYLVADDSGAMDFQGFMD 119 Query: 121 GYTQFFG-GSQPNLPARSVVGVAALANPGFLVEIEVIAAK 159 GY QFFG +QPNLP RSV VA LANP +LVEIEV+A + Sbjct: 120 GYVQFFGTDAQPNLPTRSVFEVAGLANPNWLVEIEVVAVR 159 >ref|YP_365270.1| putative endoribonuclease L-PSP [Xanthomonas campestris pv. vesicatoria str. 85-10] emb|CAJ25270.1| putative endoribonuclease L-PSP [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 167 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/150 (58%), Positives = 104/150 (69%), Gaps = 3/150 (2%) Query: 13 SAMATAASADVVRHPIPNSTFPIAQAVTVTGNTTTVYVSGQVPPVINKDADPSSPPAYGD 72 S++ A +A+V+RH IPNS FPIA AV + TVYVSG++P VI+ A S AYGD Sbjct: 17 SSLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKLPAVIDTSAPKDSAAAYGD 76 Query: 73 TKTQTVGVLNRIKTILEGQGLGMGDVVKMQVFLVHNAS--APMDFKAFMEGYTQFFG-GS 129 TK QTV VLN+IK L GLGMGDVVKMQVFLV + + MDF FMEGY QFFG Sbjct: 77 TKVQTVSVLNQIKQQLATLGLGMGDVVKMQVFLVGDPAMGGKMDFSGFMEGYRQFFGTKE 136 Query: 130 QPNLPARSVVGVAALANPGFLVEIEVIAAK 159 QPNLPARS +AAL NP + VEIEV+A + Sbjct: 137 QPNLPARSAFQIAALGNPLYRVEIEVVAVR 166 >ref|ZP_06489114.1| putative endoribonuclease L-PSP [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 163 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/150 (59%), Positives = 103/150 (68%), Gaps = 3/150 (2%) Query: 13 SAMATAASADVVRHPIPNSTFPIAQAVTVTGNTTTVYVSGQVPPVINKDADPSSPPAYGD 72 S+ A +A+V+RH IPNS FPIA AV + TVYVSG+VP VI+ A S AYGD Sbjct: 13 SSFGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTSAPKDSAAAYGD 72 Query: 73 TKTQTVGVLNRIKTILEGQGLGMGDVVKMQVFLVHNAS--APMDFKAFMEGYTQFFG-GS 129 TK QTV VLN+IK L GLGMGDVVKMQVFLV + + MDF FMEGY QFFG Sbjct: 73 TKAQTVSVLNQIKQQLATLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKE 132 Query: 130 QPNLPARSVVGVAALANPGFLVEIEVIAAK 159 QPNLPARS +AAL NP + VEIEV+A + Sbjct: 133 QPNLPARSAFQIAALGNPLYRVEIEVVAVR 162 >ref|YP_004852856.1| translation initiation inhibitor [Xanthomonas axonopodis pv. citrumelo F1] gb|AEO43558.1| translation initiation inhibitor [Xanthomonas axonopodis pv. citrumelo F1] Length = 167 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/150 (58%), Positives = 104/150 (69%), Gaps = 3/150 (2%) Query: 13 SAMATAASADVVRHPIPNSTFPIAQAVTVTGNTTTVYVSGQVPPVINKDADPSSPPAYGD 72 +++ A +A+V+RH IPNS FPIA AV + TVYVSG+VP VI+ A S AYGD Sbjct: 17 ASLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTSAPKDSAAAYGD 76 Query: 73 TKTQTVGVLNRIKTILEGQGLGMGDVVKMQVFLVHNAS--APMDFKAFMEGYTQFFG-GS 129 TK QTV VLN+IK L GLGMGDVVKMQVFLV + + MDF FMEGY QFFG Sbjct: 77 TKAQTVSVLNQIKQQLAMLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKE 136 Query: 130 QPNLPARSVVGVAALANPGFLVEIEVIAAK 159 QPNLPARS +AAL NP + VEIEV+A + Sbjct: 137 QPNLPARSAFQIAALGNPLYRVEIEVVAVR 166