BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0254.0001.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_483769.1| hypothetical protein RPB_0146 [Rhodopseudomonas... 411 e-113 ref|ZP_08628978.1| hypothetical protein CSIRO_2063 [Bradyrhizobi... 376 e-102 ref|NP_769505.1| hypothetical protein blr2865 [Bradyrhizobium ja... 279 2e-73 ref|YP_001967725.1| hypothetical protein pCNB_p81 [Comamonas tes... 251 8e-65 ref|YP_003336329.1| hypothetical protein Sros_0562 [Streptospora... 237 1e-60 >ref|YP_483769.1| hypothetical protein RPB_0146 [Rhodopseudomonas palustris HaA2] gb|ABD04858.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 249 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/250 (76%), Positives = 218/250 (87%), Gaps = 1/250 (0%) Query: 1 MTNTIEASDGGYRFMPGVSQYSCGIGTLPGFAIERVSFSEPVPLRAGFARIADIIKAVGR 60 M T+EA + GYR+MPGV QYSCGI LPGFAIERV F+EPVPL+ GFA+IA+I+KA GR Sbjct: 1 MIETVEAPNSGYRYMPGVFQYSCGIAALPGFAIERVRFAEPVPLKQGFAKIAEILKAAGR 60 Query: 61 PLTAFGACELRSPAPFTEDGFRAFNEIYIKTLVAWGVMRDGVNPVARSNVCPKLDPPGEP 120 PLTAFGACELRSPAPFTEDGF+AFNEIYI+TLV WG+M+DG+NP+ARSNVCP++DPP EP Sbjct: 61 PLTAFGACELRSPAPFTEDGFKAFNEIYIQTLVDWGIMKDGINPIARSNVCPQIDPPAEP 120 Query: 121 SFHAFCYTVPAAKDAPTSFVVAGSGESVEGKANYRDHTVALGDTSPAGLLAKAKFVADEM 180 SF+AF YTVP A +AP SFV+AGSGE+ EGK NYRDHTVALGDTSPAGL KA+FV EM Sbjct: 121 SFYAFSYTVP-ADNAPKSFVIAGSGEAPEGKGNYRDHTVALGDTSPAGLQKKAQFVLGEM 179 Query: 181 ERRMSAFGGRWQDTTAVQLYTVHDAYPVLESELGRRGVLRNGLTWHFDRPPVVGLDFEMD 240 ERRMSAFGG W+D T QLYTVHD +P LESELG RGV R+GLTWHF+RPPV GLD+EMD Sbjct: 180 ERRMSAFGGSWRDITGAQLYTVHDIHPFLESELGNRGVFRHGLTWHFNRPPVEGLDYEMD 239 Query: 241 CRRVHRERVV 250 CR VHRERVV Sbjct: 240 CRCVHRERVV 249 >ref|ZP_08628978.1| hypothetical protein CSIRO_2063 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08337.1| hypothetical protein CSIRO_2063 [Bradyrhizobiaceae bacterium SG-6C] Length = 251 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/250 (70%), Positives = 202/250 (80%), Gaps = 1/250 (0%) Query: 1 MTNTIEASDGGYRFMPGVSQYSCGIGTLPGFAIERVSFSEPVPLRAGFARIADIIKAVGR 60 M T++A +GGYRFMPGVSQYS G+ LPGFA+ERV F++PVPLR GF RIA +K GR Sbjct: 1 MIKTVDAPNGGYRFMPGVSQYSAGVAALPGFALERVRFTKPVPLRLGFERIAQTLKDAGR 60 Query: 61 PLTAFGACELRSPAPFTEDGFRAFNEIYIKTLVAWGVMRDGVNPVARSNVCPKLDPPGEP 120 PL AF ACELRSPAPFTE GF AFNE+Y TL AWG+M DGVNPVARSNVCPK+DPP EP Sbjct: 61 PLAAFAACELRSPAPFTESGFVAFNEVYTGTLKAWGLMLDGVNPVARSNVCPKIDPPSEP 120 Query: 121 SFHAFCYTVPAAKDAPTSFVVAGSGESVEGKANYRDHTVALGDTSPAGLLAKAKFVADEM 180 F+AF Y VPA +APTSFV+AGSGE+ EGK NYRDH V LGDTSP +L KA++V EM Sbjct: 121 GFYAFTYAVPAV-NAPTSFVIAGSGEAPEGKGNYRDHAVRLGDTSPPAMLEKAQWVLGEM 179 Query: 181 ERRMSAFGGRWQDTTAVQLYTVHDAYPVLESELGRRGVLRNGLTWHFDRPPVVGLDFEMD 240 ERRMSAFGG W TA QLYTVHD YP +E+ELG+RG+ R GLTWHF+RPPV L++EMD Sbjct: 180 ERRMSAFGGDWSQVTATQLYTVHDIYPFIETELGKRGIFRQGLTWHFNRPPVQDLEYEMD 239 Query: 241 CRRVHRERVV 250 CRRV+ ERV+ Sbjct: 240 CRRVYMERVL 249 >ref|NP_769505.1| hypothetical protein blr2865 [Bradyrhizobium japonicum USDA 110] dbj|BAC48130.1| blr2865 [Bradyrhizobium japonicum USDA 110] Length = 248 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 142/248 (57%), Positives = 167/248 (67%), Gaps = 2/248 (0%) Query: 4 TIEASDGGYRFMPGVSQYSCGIGTLPGFAIERVSFSEPVPLRAGFARIADIIKAVGRPLT 63 T E S G YRF+P V QYS G G+ IERV VPL GFA A I+ GRPLT Sbjct: 2 TREFSAGNYRFIPSVFQYSAGAAADDGYEIERVRLDRLVPLAEGFALAAKFIQEAGRPLT 61 Query: 64 AFGACELRSPAPFTEDGFRAFNEIYIKTLVAWGVMRDGVNPVARSNVCPKLDPPGEPSFH 123 AF ACELRSPA F+E+GFRAFN Y+KTL WG+ NPVARSNVCP++DPP EPSF+ Sbjct: 62 AFCACELRSPAAFSEEGFRAFNLHYVKTLSEWGIFDGTTNPVARSNVCPEIDPPTEPSFY 121 Query: 124 AFCYTVPAAKDAPTSFVVAGSGESVEGKANYRDHTVALGDTSPAGLLAKAKF-VADEMER 182 AF +T P AP SFV+AG E+ EG Y + TV D SP GL K +F +ME Sbjct: 122 AFSFTRPTRSKAP-SFVIAGGAEAREGSGTYVERTVRYRDLSPEGLREKVRFTTTSQMEN 180 Query: 183 RMSAFGGRWQDTTAVQLYTVHDAYPVLESELGRRGVLRNGLTWHFDRPPVVGLDFEMDCR 242 RM+AFG W+DTT VQ Y+VHD + L EL RRG LR+GLTWH+ RPPVV L++EMDCR Sbjct: 181 RMAAFGFGWKDTTGVQAYSVHDFHHALVDELVRRGALRSGLTWHYARPPVVDLEYEMDCR 240 Query: 243 RVHRERVV 250 RV RE V+ Sbjct: 241 RVMREAVI 248 >ref|YP_001967725.1| hypothetical protein pCNB_p81 [Comamonas testosteroni CNB-1] gb|ABI49649.1| hypothetical protein [Comamonas testosteroni CNB-1] gb|ABM06247.1| hypothetical protein [Comamonas testosteroni CNB-1] gb|AEI74588.1| 2-amino-5-chloromuconate deaminase [Cupriavidus sp. D4] Length = 251 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 126/251 (50%), Positives = 156/251 (62%), Gaps = 1/251 (0%) Query: 1 MTNTIEASDGGYRFMPGVSQYSCGIGTLPGFAIERVSFSEPVPLRAGFARIADIIKAVGR 60 M + + S GGYR++P V QYS GI PGF IERV F PVPL F + ++A+GR Sbjct: 1 MPDAVVFSPGGYRYIPAVFQYSAGIAAEPGFEIERVRFHRPVPLAEAFVAVESHLRAIGR 60 Query: 61 PLTAFGACELRSPAPFTEDGFRAFNEIYIKTLVAWGVMRDGVNPVARSNVCPKLDPPGEP 120 P T+F CELRSP PF + GF FN Y+KTL WG+ +D VNPVAR+NVCP D P P Sbjct: 61 PTTSFAQCELRSPDPFNDQGFIDFNTEYVKTLERWGIYKDRVNPVARTNVCPMYDKPTTP 120 Query: 121 SFHAFCYTVPAAKDAPT-SFVVAGSGESVEGKANYRDHTVALGDTSPAGLLAKAKFVADE 179 S AF YTVP A SF +AG G++ G A Y+D VA GDTSP GL K FV +E Sbjct: 121 SMFAFSYTVPTTSAAKRPSFQLAGGGDARGGSAPYKDRIVAFGDTSPEGLREKVVFVIEE 180 Query: 180 MERRMSAFGGRWQDTTAVQLYTVHDAYPVLESELGRRGVLRNGLTWHFDRPPVVGLDFEM 239 ME R+ G W D + QLYTV + ++ EL RRG GL W++ RPPV+GL++EM Sbjct: 181 MESRLKTLGLGWADAVSTQLYTVQNIGHLVGPELARRGCGAGGLVWNYTRPPVIGLEYEM 240 Query: 240 DCRRVHRERVV 250 D R RE V+ Sbjct: 241 DVRGAVRETVL 251 >ref|YP_003336329.1| hypothetical protein Sros_0562 [Streptosporangium roseum DSM 43021] gb|ACZ83586.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 250 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 121/240 (50%), Positives = 148/240 (61%), Gaps = 3/240 (1%) Query: 10 GGYRFMP--GVSQYSCGIGTLPGFAIERVSFSEPVPLRAGFARIADIIKAVGRPLTAFGA 67 GGYRF+ GV Q+S G+ PGFA+ERV F+ PVPL GFA + A+GRP TAF A Sbjct: 9 GGYRFIKVEGVFQFSSGVAAAPGFALERVRFARPVPLAEGFAAAERYLAAIGRPTTAFAA 68 Query: 68 CELRSPAPFTEDGFRAFNEIYIKTLVAWGVMRDGVNPVARSNVCPKLDPPGEPSFHAFCY 127 CELRS APFTE GF FN +Y+KTL WG+ DGVNPVAR+NVCP D P PS HAF Y Sbjct: 69 CELRSSAPFTEQGFVDFNRVYVKTLERWGLYADGVNPVARTNVCPAYDKPEVPSLHAFSY 128 Query: 128 TVPAAKDAPTSFVVAGSGESVEGKANYRDHTVALGDTSPAGLLAKAKFVADEMERRMSAF 187 TV + PT FV+AG+ E +G YRD V G+TS + K +FV E E R+ Sbjct: 129 TVESDSPHPT-FVLAGNAECAQGPGEYRDSIVRRGETSIDAMRDKLRFVRAEQEERLRVL 187 Query: 188 GGRWQDTTAVQLYTVHDAYPVLESELGRRGVLRNGLTWHFDRPPVVGLDFEMDCRRVHRE 247 G +W + Q YT+H+ P+L E+ G +TWH PPVV +FEMD R V RE Sbjct: 188 GLQWSHVLSTQAYTLHEVGPLLREEIFAYGAGTGAVTWHLASPPVVDCEFEMDARTVLRE 247