BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0253.0004.p (509 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772556.1| virulence factor [Bradyrhizobium japonicum USDA... 809 0.0 ref|ZP_08630721.1| putative peptidoglycan lipid II flippase [Bra... 778 0.0 ref|YP_001207056.1| putative virulence factor MviN-like protein ... 756 0.0 ref|YP_002288338.1| integral membrane protein MviN [Oligotropha ... 740 0.0 ref|NP_949314.1| integral membrane protein MviN [Rhodopseudomona... 734 0.0 >ref|NP_772556.1| virulence factor [Bradyrhizobium japonicum USDA 110] dbj|BAC51181.1| bll5916 [Bradyrhizobium japonicum USDA 110] Length = 509 Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/508 (82%), Positives = 458/508 (90%) Query: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 MLGRIFTVGGYTLLSR+TGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA Sbjct: 1 MLGRIFTVGGYTLLSRLTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 Query: 61 AFVPAYAHVHGERGEASARLFADRIFTLLFASQVILLAVAMAFMPQAMSILAPGFTEDAA 120 A+VPAYAHVHGERGE +A+LFADRIFTLL ASQV+LL A FMPQAMSILAPGF+EDA Sbjct: 61 AWVPAYAHVHGERGEGAAKLFADRIFTLLLASQVVLLIAAWLFMPQAMSILAPGFSEDAE 120 Query: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLAMMMTLALAAFFP 180 QRKLAIELTRITFPYLLLITLVTLYGGMLNVM RFASAAAA IFLN+AMMMTLA+A +FP Sbjct: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMQRFASAAAASIFLNVAMMMTLAVAVWFP 180 Query: 181 SAGHAAAWGVLISGFLQFFLLAGDLARHGGLPRFAPLRLDEDVRGFFRALGPATLGSMGT 240 +AGHAAAWGVLISGFLQ+FLLAGDLARHGGLPRFAPL+LDEDVRGFF+ALGPATLGSMGT Sbjct: 181 TAGHAAAWGVLISGFLQYFLLAGDLARHGGLPRFAPLKLDEDVRGFFKALGPATLGSMGT 240 Query: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLSADDHAGA 300 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRR++A+DH GA Sbjct: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRITANDHDGA 300 Query: 301 MAAQRRAFDFTLLFSVPFVAAFLTVADPIMRAMFARGAFSKADAASAGATLAAYAVGLIP 360 M AQRRAFDFTLLFS+PFVAAFLTV D IMRA+FARGAFSKADA +AG+TLAAYA+GLIP Sbjct: 301 MKAQRRAFDFTLLFSIPFVAAFLTVPDEIMRALFARGAFSKADAVAAGSTLAAYAIGLIP 360 Query: 361 FVMIRSAVATFYARKDTATPVKAALTGVAVNVALKIALVGSLAQVGLALATATGAWVNLL 420 FV+IRSAVATFYARKDTATPV+A+LTG+AVNVALK+AL+GSLAQ+GLALATA G W NLL Sbjct: 361 FVLIRSAVATFYARKDTATPVRASLTGIAVNVALKLALMGSLAQIGLALATAVGVWTNLL 420 Query: 421 LVLMFAVRRGYLALDRALIRSFGTFALCGVLLAVALWLTSHFAYVWFAPMQIFRDELILL 480 LVL FAVRRG+L LDRA + S F L G++LA A WL + F+ A + FRDE L Sbjct: 421 LVLFFAVRRGFLVLDRAWLLSLAKFLLTGLILAAAFWLIARFSPAALASVHAFRDEATLA 480 Query: 481 LLIAVGVFVYALSILTLFGRGWLFALRR 508 LL G VYAL+IL LFGR WL +L R Sbjct: 481 LLAVGGTIVYALAILILFGRKWLMSLVR 508 >ref|ZP_08630721.1| putative peptidoglycan lipid II flippase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06575.1| putative peptidoglycan lipid II flippase [Bradyrhizobiaceae bacterium SG-6C] Length = 507 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/507 (83%), Positives = 457/507 (90%) Query: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGP+ADAFFVALRLPNHFRAIFAEGAFNA Sbjct: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPLADAFFVALRLPNHFRAIFAEGAFNA 60 Query: 61 AFVPAYAHVHGERGEASARLFADRIFTLLFASQVILLAVAMAFMPQAMSILAPGFTEDAA 120 AFVPAYAHVHGERGEA+A+LF+DRIFTLLFASQV+LL +AM FMPQAM+ILAPGFT+D A Sbjct: 61 AFVPAYAHVHGERGEAAAKLFSDRIFTLLFASQVVLLVLAMVFMPQAMTILAPGFTDDPA 120 Query: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLAMMMTLALAAFFP 180 QR LAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNL+MM TLALAAFFP Sbjct: 121 QRTLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLSMMATLALAAFFP 180 Query: 181 SAGHAAAWGVLISGFLQFFLLAGDLARHGGLPRFAPLRLDEDVRGFFRALGPATLGSMGT 240 +AGHAAAWGVLISGFLQ+ LLAGD HG LP+F L+LD+DVR FFRALGPATLGSMGT Sbjct: 181 TAGHAAAWGVLISGFLQYILLAGDAKVHGILPKFTSLKLDDDVRSFFRALGPATLGSMGT 240 Query: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLSADDHAGA 300 QVALFADTIIATFL AGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRR++A DH GA Sbjct: 241 QVALFADTIIATFLAAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRITAGDHEGA 300 Query: 301 MAAQRRAFDFTLLFSVPFVAAFLTVADPIMRAMFARGAFSKADAASAGATLAAYAVGLIP 360 +A+QRRAFDFTLLFS+PFVAAF+TV D IMRAMFARGAFSKADAA+AGATLAAYAVGLIP Sbjct: 301 IASQRRAFDFTLLFSIPFVAAFITVPDVIMRAMFARGAFSKADAAAAGATLAAYAVGLIP 360 Query: 361 FVMIRSAVATFYARKDTATPVKAALTGVAVNVALKIALVGSLAQVGLALATATGAWVNLL 420 FV+IRSAVATFYARKDTATPVKAALTGVAVNVALK+ALVGSLAQ+GLALATA GAWVNLL Sbjct: 361 FVLIRSAVATFYARKDTATPVKAALTGVAVNVALKVALVGSLAQIGLALATAVGAWVNLL 420 Query: 421 LVLMFAVRRGYLALDRALIRSFGTFALCGVLLAVALWLTSHFAYVWFAPMQIFRDELILL 480 LV++FA RR + DRA++ S FA GV+LA ALWLTS +A + M RDE L Sbjct: 421 LVVLFATRRKFFVFDRAMVTSLVKFAAAGVILAAALWLTSRWAASALSSMTSLRDESALG 480 Query: 481 LLIAVGVFVYALSILTLFGRGWLFALR 507 LLIAVG VYA+ IL LFG+ WL A R Sbjct: 481 LLIAVGAVVYAVCILLLFGKRWLMARR 507 >ref|YP_001207056.1| putative virulence factor MviN-like protein [Bradyrhizobium sp. ORS 278] emb|CAL78839.1| Putative virulence factor MviN-like protein [Bradyrhizobium sp. ORS 278] Length = 509 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/508 (80%), Positives = 451/508 (88%) Query: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 MLGRIFTVGGYTLLSR+TGFARDIMLAAILGAGP+ADAFF+A RLPNHFRAIFAEGAFNA Sbjct: 1 MLGRIFTVGGYTLLSRLTGFARDIMLAAILGAGPIADAFFIAFRLPNHFRAIFAEGAFNA 60 Query: 61 AFVPAYAHVHGERGEASARLFADRIFTLLFASQVILLAVAMAFMPQAMSILAPGFTEDAA 120 AFVPAYAHVHGE+G ASA LFADRIFTLL ASQ++LL +A FMPQAM+ILAPGFT+D A Sbjct: 61 AFVPAYAHVHGEKGLASASLFADRIFTLLLASQIVLLILAWVFMPQAMTILAPGFTDDPA 120 Query: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLAMMMTLALAAFFP 180 QR+LAI LTRITFPYLLLITLVTLYGGMLNVM RFASAAAA IFLNLAMM+TLALAAFFP Sbjct: 121 QRELAITLTRITFPYLLLITLVTLYGGMLNVMQRFASAAAASIFLNLAMMVTLALAAFFP 180 Query: 181 SAGHAAAWGVLISGFLQFFLLAGDLARHGGLPRFAPLRLDEDVRGFFRALGPATLGSMGT 240 +AGHAAAWGVLISGFLQ+ LLAGDLARHGGLPRFAPL+LD+D+R FF+ALGPATLGSMGT Sbjct: 181 NAGHAAAWGVLISGFLQYVLLAGDLARHGGLPRFAPLKLDDDIRAFFKALGPATLGSMGT 240 Query: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLSADDHAGA 300 QVA+FADTIIATFLPAGA+SALYYADRLNQLPIGVIGIAIGTVLLPEMSRRL+A DH GA Sbjct: 241 QVAMFADTIIATFLPAGAISALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLTAGDHDGA 300 Query: 301 MAAQRRAFDFTLLFSVPFVAAFLTVADPIMRAMFARGAFSKADAASAGATLAAYAVGLIP 360 MA QRRAF+FTLLFSVPFVAAFL V D I RAMFARGAF+K DAA+AGATLAAYAVGLIP Sbjct: 301 MAQQRRAFEFTLLFSVPFVAAFLAVPDVITRAMFARGAFTKGDAAAAGATLAAYAVGLIP 360 Query: 361 FVMIRSAVATFYARKDTATPVKAALTGVAVNVALKIALVGSLAQVGLALATATGAWVNLL 420 FVMIRSAV+TFYARKDTATPVKA+LTG+ VNV LK+ L+GSLAQVGLALATA GAW+NLL Sbjct: 361 FVMIRSAVSTFYARKDTATPVKASLTGLTVNVVLKVLLMGSLAQVGLALATAVGAWINLL 420 Query: 421 LVLMFAVRRGYLALDRALIRSFGTFALCGVLLAVALWLTSHFAYVWFAPMQIFRDELILL 480 LVL FAV + YL +DR L S FA GVLLAVALWL++ + +DE++L+ Sbjct: 421 LVLGFAVHKRYLVVDRRLASSLLKFAATGVLLAVALWLSAVLVSPHLTSVGRAQDEVMLV 480 Query: 481 LLIAVGVFVYALSILTLFGRGWLFALRR 508 LLIA+G +YA +IL LFG WL AL R Sbjct: 481 LLIAIGAVIYAAAILGLFGLRWLKALVR 508 >ref|YP_002288338.1| integral membrane protein MviN [Oligotropha carboxidovorans OM5] ref|YP_004633571.1| virulence factor MviN [Oligotropha carboxidovorans OM5] gb|ACI92473.1| integral membrane protein MviN [Oligotropha carboxidovorans OM5] gb|AEI03753.1| virulence factor MviN [Oligotropha carboxidovorans OM4] gb|AEI07330.1| virulence factor MviN [Oligotropha carboxidovorans OM5] Length = 509 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/508 (79%), Positives = 447/508 (87%) Query: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGP+ADAFFVALRLPNHFRAIFAEGAFNA Sbjct: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPLADAFFVALRLPNHFRAIFAEGAFNA 60 Query: 61 AFVPAYAHVHGERGEASARLFADRIFTLLFASQVILLAVAMAFMPQAMSILAPGFTEDAA 120 AF+PAY HV + G ASA LFADRIFTLLFASQ++LLAVA FMPQA+S+LAPGF++D Sbjct: 61 AFIPAYTHVQDKGGPASAHLFADRIFTLLFASQIVLLAVAWLFMPQAISLLAPGFSDDPG 120 Query: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLAMMMTLALAAFFP 180 QR+LAIELTRITFPYLLLITLVTLYGG+LNVM RFASAAAA I LNL+MMMTLALAAFFP Sbjct: 121 QRELAIELTRITFPYLLLITLVTLYGGILNVMQRFASAAAASILLNLSMMMTLALAAFFP 180 Query: 181 SAGHAAAWGVLISGFLQFFLLAGDLARHGGLPRFAPLRLDEDVRGFFRALGPATLGSMGT 240 SAGHAAAWGVLISGFLQ+FLLAGD AR G LPRFA ++ DED+ GFFRALGPAT+GSMGT Sbjct: 181 SAGHAAAWGVLISGFLQYFLLAGDAARTGVLPRFAKIKFDEDIVGFFRALGPATVGSMGT 240 Query: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLSADDHAGA 300 Q+ALFADTIIATFL +GALSALYYADRLNQLPIGVIGIAIGTVLLP+M+RR+S DHAGA Sbjct: 241 QIALFADTIIATFLASGALSALYYADRLNQLPIGVIGIAIGTVLLPDMARRISGGDHAGA 300 Query: 301 MAAQRRAFDFTLLFSVPFVAAFLTVADPIMRAMFARGAFSKADAASAGATLAAYAVGLIP 360 MAAQRRAF+FTLLFSVPFVAAFLTV D IMRAMFARGAFS ADAA+AGATLAAYAVGLIP Sbjct: 301 MAAQRRAFEFTLLFSVPFVAAFLTVPDVIMRAMFARGAFSSADAATAGATLAAYAVGLIP 360 Query: 361 FVMIRSAVATFYARKDTATPVKAALTGVAVNVALKIALVGSLAQVGLALATATGAWVNLL 420 FV+IRSAVATFYARKDTATPVK+ALTG+AVN+ LK+ L+GSLAQ+GLALATA G WVNLL Sbjct: 361 FVLIRSAVATFYARKDTATPVKSALTGIAVNLVLKLLLMGSLAQIGLALATAIGQWVNLL 420 Query: 421 LVLMFAVRRGYLALDRALIRSFGTFALCGVLLAVALWLTSHFAYVWFAPMQIFRDELILL 480 LVL FAV RG+L +DRA +S G FA+ GV LA ALW S A W + + DE+ LL Sbjct: 421 LVLGFAVHRGFLDIDRAFTQSLGKFAIAGVSLAAALWGASLLAARWLTSVTVAHDEIALL 480 Query: 481 LLIAVGVFVYALSILTLFGRGWLFALRR 508 +L+AVG VYA I+ LFG WL AL R Sbjct: 481 ILVAVGTVVYAALIIALFGPRWLKALVR 508 >ref|NP_949314.1| integral membrane protein MviN [Rhodopseudomonas palustris CGA009] emb|CAE29418.1| putative virulence factor MviN-like protein, possible efflux protein [Rhodopseudomonas palustris CGA009] Length = 509 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/508 (80%), Positives = 445/508 (87%) Query: 1 MLGRIFTVGGYTLLSRVTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 ML RIFTVGG+TLLSR+TGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA Sbjct: 1 MLKRIFTVGGFTLLSRLTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60 Query: 61 AFVPAYAHVHGERGEASARLFADRIFTLLFASQVILLAVAMAFMPQAMSILAPGFTEDAA 120 AFVPAYAHVHGE+GEASA+LFADRIFTLLF SQ++LLAVA+AFMPQ MSILAPGFT+D Sbjct: 61 AFVPAYAHVHGEKGEASAKLFADRIFTLLFLSQLVLLAVALAFMPQMMSILAPGFTDDPE 120 Query: 121 QRKLAIELTRITFPYLLLITLVTLYGGMLNVMHRFASAAAAPIFLNLAMMMTLALAAFFP 180 QR LAIELTRITFPYLLLITLVTLYGG+LNVM RFASAAAA IFLN++MM TLALAAFFP Sbjct: 121 QRALAIELTRITFPYLLLITLVTLYGGILNVMQRFASAAAASIFLNISMMATLALAAFFP 180 Query: 181 SAGHAAAWGVLISGFLQFFLLAGDLARHGGLPRFAPLRLDEDVRGFFRALGPATLGSMGT 240 SAGHAAAWGVLISG LQ+FLLAGDL+ HGGLPRFA +LDEDVR FFRALGPATLGSMGT Sbjct: 181 SAGHAAAWGVLISGVLQYFLLAGDLSLHGGLPRFARPKLDEDVRAFFRALGPATLGSMGT 240 Query: 241 QVALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRRLSADDHAGA 300 Q+ALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSR+L+A D AGA Sbjct: 241 QLALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRQLTAGDDAGA 300 Query: 301 MAAQRRAFDFTLLFSVPFVAAFLTVADPIMRAMFARGAFSKADAASAGATLAAYAVGLIP 360 A+QRRAF+FTLLFSVPFVAAFLTV D IMRAMFARGAF++ADA SAG TLAAYA+ LIP Sbjct: 301 KASQRRAFEFTLLFSVPFVAAFLTVPDEIMRAMFARGAFTRADAISAGTTLAAYAIALIP 360 Query: 361 FVMIRSAVATFYARKDTATPVKAALTGVAVNVALKIALVGSLAQVGLALATATGAWVNLL 420 FV+IRSAVA FYARKDTATPVKAALTGVA NV LK AL+GSLAQVGLALATA GAW+NLL Sbjct: 361 FVLIRSAVAPFYARKDTATPVKAALTGVATNVVLKFALMGSLAQVGLALATAAGAWINLL 420 Query: 421 LVLMFAVRRGYLALDRALIRSFGTFALCGVLLAVALWLTSHFAYVWFAPMQIFRDELILL 480 LV+ F+VR GYL DR L+R+ F + GVLL ALWLT+ A + A + R E L Sbjct: 421 LVIFFSVRAGYLEFDRELVRAILKFGIIGVLLGAALWLTAWLAPPYLALLPALRSEAALA 480 Query: 481 LLIAVGVFVYALSILTLFGRGWLFALRR 508 LLI VG +Y +IL LFG W+ L R Sbjct: 481 LLILVGAVIYGAAILILFGPRWIKRLLR 508