BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0252.0008.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001206971.1| putative flagellin protein, C-terminus [Brad...   207   3e-52
ref|YP_001208806.1| hypothetical protein BRADO7005 [Bradyrhizobi...   206   1e-51
ref|YP_001236709.1| hypothetical protein BBta_0522 [Bradyrhizobi...   204   3e-51
ref|YP_001206969.1| putative flagellin protein, C-terminus [Brad...   204   4e-51
ref|ZP_08630680.1| flagellar hook-associated protein [Bradyrhizo...   203   8e-51

>ref|YP_001206971.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278]
 emb|CAL78754.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278]
          Length = 517

 Score =  207 bits (528), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 107/123 (86%), Positives = 112/123 (91%)

Query: 1   MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKKVNTALDNPTNFFTAQSLDNRASDI 60
           MSGIVLSASVRQNLLSLQSTA LLATTQN LSTGKKVN+ALDNPTNFFTAQ LDNRASDI
Sbjct: 3   MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 62

Query: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSAKSSVTTAAIPVEK 120
           NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKS+ANQ LQ+AVGYS KSSVT+AA+    
Sbjct: 63  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSSVTSAALSGAT 122

Query: 121 KND 123
             D
Sbjct: 123 ATD 125


>ref|YP_001208806.1| hypothetical protein BRADO7005 [Bradyrhizobium sp. ORS 278]
 emb|CAL80591.1| conserved hypothetical protein; putative flagellin C-ter domain
           [Bradyrhizobium sp. ORS 278]
          Length = 523

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/123 (86%), Positives = 112/123 (91%)

Query: 1   MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKKVNTALDNPTNFFTAQSLDNRASDI 60
           MSGIVLSASVRQNLLSLQSTA LLATTQN LSTGKKVN+ALDNPTNFFTAQ LDNRASDI
Sbjct: 9   MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 68

Query: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSAKSSVTTAAIPVEK 120
           +NLLDGIGNGVQVLQAANTGITSLQKLVDSAKS+ANQ LQ+AVGYS KSSVT+AA+    
Sbjct: 69  SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSSVTSAALSGAT 128

Query: 121 KND 123
             D
Sbjct: 129 ATD 131


>ref|YP_001236709.1| hypothetical protein BBta_0522 [Bradyrhizobium sp. BTAi1]
 gb|ABQ32803.1| hypothetical protein BBta_0522 [Bradyrhizobium sp. BTAi1]
          Length = 522

 Score =  204 bits (520), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/116 (89%), Positives = 111/116 (95%)

Query: 1   MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKKVNTALDNPTNFFTAQSLDNRASDI 60
           MSGIVLSASVRQNLLSLQSTA LLATTQN LSTGKKVN+ALDNPTNFFTAQ LDNRASDI
Sbjct: 9   MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 68

Query: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSAKSSVTTAAI 116
           +NLLDGIGNGVQVLQAANTGITSLQKLVDSAKS+ANQ LQ+AVGYS KS+VT+AA+
Sbjct: 69  SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSTVTSAAL 124


>ref|YP_001206969.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278]
 emb|CAL78752.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278]
          Length = 516

 Score =  204 bits (519), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 104/116 (89%), Positives = 111/116 (95%)

Query: 1   MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKKVNTALDNPTNFFTAQSLDNRASDI 60
           MSGIVLSASVRQNLLSLQSTA LLATTQN LSTGKKVN+ALDNPTNFFTAQ LDNRASDI
Sbjct: 3   MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 62

Query: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSAKSSVTTAAI 116
           +NLLDGIGNGVQVLQAANTGITSLQKLVDSAKS+ANQ LQ++VGYS KSSVT+AA+
Sbjct: 63  SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSSVGYSTKSSVTSAAL 118


>ref|ZP_08630680.1| flagellar hook-associated protein [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP06534.1| flagellar hook-associated protein [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 665

 Score =  203 bits (516), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 104/123 (84%), Positives = 111/123 (90%)

Query: 1   MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKKVNTALDNPTNFFTAQSLDNRASDI 60
           MS IVLSASVRQNLLSLQSTADLL+TTQ RL+TGKKVNTALDNPTNFFTA  LD+RASDI
Sbjct: 1   MSSIVLSASVRQNLLSLQSTADLLSTTQTRLATGKKVNTALDNPTNFFTAAGLDSRASDI 60

Query: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSAKSSVTTAAIPVEK 120
           NNLLDGIGNGVQVLQAANTGITSLQKLVD+AKS+ANQALQ  VGYS+KSSVTT AI    
Sbjct: 61  NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQTTVGYSSKSSVTTTAISGAT 120

Query: 121 KND 123
            +D
Sbjct: 121 ADD 123