BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0251.0032.p         (46 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_783279.1| hypothetical protein RPE_4375 [Rhodopseudomonas...    50   8e-05

>ref|YP_783279.1| hypothetical protein RPE_4375 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08299.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 713

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 1   VISGMQAARAITGAELEIPGERFLHATRQFVSLCDVMR---SCAP 42
           V+SGMQAARAI+G E EI GE FLHA  +++  CD++R    C P
Sbjct: 669 VMSGMQAARAISGVEREIVGETFLHAPFEYLGPCDLLRRYVRCWP 713