BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0023.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_530748.1| thiolase [Rhodopseudomonas palustris BisB18] >g... 454 e-126 ref|YP_025402.1| putative thiolase [Ralstonia eutropha JMP134] >... 379 e-103 ref|YP_004836635.1| acetyl-CoA C-acetyltransferase [Sphingobium ... 379 e-103 ref|YP_004833900.1| hypothetical protein SLG_07680 [Sphingobium ... 376 e-102 ref|YP_299472.1| hypothetical protein Reut_B5282 [Ralstonia eutr... 359 4e-97 >ref|YP_530748.1| thiolase [Rhodopseudomonas palustris BisB18] gb|ABD86429.1| Thiolase [Rhodopseudomonas palustris BisB18] Length = 389 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 213/384 (55%), Positives = 278/384 (72%), Gaps = 1/384 (0%) Query: 2 RDVAIVGYSETKIDVRTGRTSYELAGDALDEILVRTNVDKSEIDGLSVSETMSESANPFW 61 RD+ I GYSET I+ ++GR++Y+L G+AL ++L T ++K IDGL+V+ +SE NPF+ Sbjct: 5 RDIVIAGYSETAIEYKSGRSAYDLGGEALAKLLAATGIEKDAIDGLAVTAPLSECPNPFF 64 Query: 62 AQYMADVLGISPSWLELMGLGGVSSIGGVARAAMAIRGGMCSIALVLAADAQSSGATPEQ 121 A YM + LG++P+WL G GG S+ GGVARAA AIR G+C + +VL+ADA S+ Sbjct: 65 AVYMTEALGLTPTWLNYGGTGGCSATGGVARAASAIRDGLCEVVVVLSADAPSTSWRANY 124 Query: 122 GAQRHEFQYPTGLRGPVGAFGMIMRRYDHLYGLNRDALAKLAVTQRQHSILNDNACPRLR 181 GA R EFQ P G++GP FG++M RY H YGLN DAL K+A+TQR H++ NDNA + + Sbjct: 125 GAYRGEFQDPPGVQGPPATFGLLMSRYKHQYGLNSDALGKIAITQRDHALHNDNAYAKFK 184 Query: 182 KPMTEHDYLNSKLVSDPLRVLDSVMVCDGANAVLVMSAAEATRRGL-KAVYPTGYAERTH 240 P+T DY S++++DPLR+LD VM CDGANA LV S A+A G+ K VYPT YAE T+ Sbjct: 185 TPITMDDYNKSRVIADPLRLLDCVMFCDGANAFLVTSEAKAKSLGISKMVYPTAYAEITN 244 Query: 241 YKVTEPMTEIMDSGFLEVGPRALKQAGLEASDIQSFHPYDDFIIAIMLQLEQIGFCPQGA 300 + +I ++GF ++ P+ KQ+GL A DI+ F PYDDF IA+M++ E GFC +G Sbjct: 245 VNGNQSCPDITETGFSKIAPKLYKQSGLSAKDIKMFQPYDDFTIAVMMKFEDFGFCKRGQ 304 Query: 301 GADFVLSRDMTFKGDLPLNTGGGQISAGQPGLAGGGLNLVEAVRQMFGDGGPRQIKRTRN 360 G+DF L D++FKG LPLNTGGGQISAGQPGLA GGLNL EAVRQMFG+GG RQ+ N Sbjct: 305 GSDFTLDTDLSFKGTLPLNTGGGQISAGQPGLASGGLNLAEAVRQMFGEGGGRQVANPSN 364 Query: 361 AMVTGIGGIPYARNWCTSGVMILE 384 A++TGIG IPYARNW TS MILE Sbjct: 365 ALITGIGVIPYARNWGTSAAMILE 388 >ref|YP_025402.1| putative thiolase [Ralstonia eutropha JMP134] ref|YP_293636.1| thiolase [Ralstonia eutropha JMP134] gb|AAR31054.1| putative thiolase [Ralstonia eutropha JMP134] gb|AAZ65779.1| Thiolase [Ralstonia eutropha JMP134] Length = 388 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/384 (48%), Positives = 256/384 (66%), Gaps = 1/384 (0%) Query: 3 DVAIVGYSETKIDVRTGRTSYELAGDALDEILVRTNVDKSEIDGLSVSETMSESANPFWA 62 D+ I GY+ET + +GR++Y+LA D LDE+ + + ++IDGL+V+ +SE +NPF A Sbjct: 5 DIVIGGYAETPVVFGSGRSAYDLAADVLDELARKYGIAPADIDGLAVTAALSEGSNPFHA 64 Query: 63 QYMADVLGISPSWLELMGLGGVSSIGGVARAAMAIRGGMCSIALVLAADAQSSGATPEQG 122 +M+D LG++ WL GG + + VA A A+R G C +ALVL ADA S+ E Sbjct: 65 AFMSDALGLALDWLATGTTGGCAMLSAVAATASALRDGHCKVALVLGADAPSTHFAAEFR 124 Query: 123 AQRHEFQYPTGLRGPVGAFGMIMRRYDHLYGLNRDALAKLAVTQRQHSILNDNACPRLRK 182 EF PTG+ P G F ++ Y+ YG AL K+ +TQR H++ N+ AC +LR+ Sbjct: 125 GYHDEFIAPTGMTRPPGFFALLHNAYEQRYGALDAALGKIVLTQRGHALENERACEKLRR 184 Query: 183 PMTEHDYLNSKLVSDPLRVLDSVMVCDGANAVLVMSAAEATRRGL-KAVYPTGYAERTHY 241 P+ DYL S+ VSDPLR+LDSVM CDGAN VL+M A A+ GL K GYAERT++ Sbjct: 185 PLALDDYLKSRKVSDPLRLLDSVMFCDGANGVLMMRAETASAMGLSKCARLAGYAERTNH 244 Query: 242 KVTEPMTEIMDSGFLEVGPRALKQAGLEASDIQSFHPYDDFIIAIMLQLEQIGFCPQGAG 301 V E +++ SGF++ GPRAL+QAGL +I YDDF IA+++QLE +GFC +G G Sbjct: 245 DVQEQPPDLLASGFVQAGPRALRQAGLTVQEIDMLQLYDDFTIAVLMQLEHMGFCGRGEG 304 Query: 302 ADFVLSRDMTFKGDLPLNTGGGQISAGQPGLAGGGLNLVEAVRQMFGDGGPRQIKRTRNA 361 A F+ D+ F G LPLNTGGGQ+SAGQPGLA GGL LVEAVRQ+FG+GG Q++ RNA Sbjct: 305 AAFIEKTDLRFSGGLPLNTGGGQLSAGQPGLAAGGLGLVEAVRQLFGEGGATQVEDPRNA 364 Query: 362 MVTGIGGIPYARNWCTSGVMILEQ 385 +VTGIGG+ Y R W S ++L++ Sbjct: 365 LVTGIGGLAYGRAWMMSSALVLDR 388 >ref|YP_004836635.1| acetyl-CoA C-acetyltransferase [Sphingobium sp. SYK-6] dbj|BAK68178.1| acetyl-CoA C-acetyltransferase [Sphingobium sp. SYK-6] Length = 390 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/384 (50%), Positives = 260/384 (67%), Gaps = 1/384 (0%) Query: 1 MRDVAIVGYSETKIDVRTGRTSYELAGDALDEILVRTNVDKSEIDGLSVSETMSESANPF 60 + D AI+ Y+ETKI + R ++L D L+++L R+ +K EIDGL +S +++ + NPF Sbjct: 3 LHDAAIIAYAETKIVPVSDRDIWQLGADILEQLLDRSGYEKGEIDGLILSASLTGAGNPF 62 Query: 61 WAQYMADVLGISPSWLELMGLGGVSSIGGVARAAMAIRGGMCSIALVLAADAQSSGATPE 120 W+Q AD L + + + + +GG S +G VARA+ AI G + L L AD + + Sbjct: 63 WSQATADALSLELDFCQTVDIGGCSPLGAVARASAAIDAGFATSVLCLYADTAVAEGSAR 122 Query: 121 QGAQRHEFQYPTGLRGPVGAFGMIMRRYDHLYGLNRDALAKLAVTQRQHSILNDNACPRL 180 + E+ P G GP AFG++ R Y+ + L+ AL KLAVTQR+H+ILND AC +L Sbjct: 123 ARSFGQEWTTPLGYIGPPAAFGLLTRYYEEKFTLDHRALGKLAVTQREHAILNDLACEKL 182 Query: 181 RKPMTEHDYLNSKLVSDPLRVLDSVMVCDGANAVLVMSAAEATRRGL-KAVYPTGYAERT 239 RKP+T DYL S++++DP+R+LDSVM CDGA+ +LV A +RGL + V P GY ERT Sbjct: 183 RKPITIEDYLQSRMINDPVRLLDSVMPCDGASGLLVTGRRAAEKRGLTRCVVPVGYGERT 242 Query: 240 HYKVTEPMTEIMDSGFLEVGPRALKQAGLEASDIQSFHPYDDFIIAIMLQLEQIGFCPQG 299 +Y+ + + + ++G G R QAGL DI +FHPYDDFIIAIM+QLE +GFCP G Sbjct: 243 NYQASRALVDPTETGHSAAGARCFAQAGLTPRDIAAFHPYDDFIIAIMMQLEMLGFCPHG 302 Query: 300 AGADFVLSRDMTFKGDLPLNTGGGQISAGQPGLAGGGLNLVEAVRQMFGDGGPRQIKRTR 359 G+ F+ D F GDLPLNTGGGQISAGQ GLAGGG NLVEAVRQ+FG+GG RQ+ TR Sbjct: 303 QGSAFIRETDFGFAGDLPLNTGGGQISAGQAGLAGGGTNLVEAVRQLFGEGGARQVTNTR 362 Query: 360 NAMVTGIGGIPYARNWCTSGVMIL 383 NA+VTGIGGIPY RNW +S MIL Sbjct: 363 NALVTGIGGIPYGRNWNSSAAMIL 386 >ref|YP_004833900.1| hypothetical protein SLG_07680 [Sphingobium sp. SYK-6] dbj|BAK65443.1| hypothetical protein SLG_07680 [Sphingobium sp. SYK-6] Length = 390 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/387 (51%), Positives = 261/387 (67%), Gaps = 7/387 (1%) Query: 1 MRDVAIVGYSETKIDVRTGRTSYELAGDALDEILVRTNVDKSEIDGLSVSETMSESANPF 60 + D+AIVGY+ETKI +R+ +EL + LD +L RT +K EI+GL +S + + + N F Sbjct: 3 LSDMAIVGYAETKIVLRSDVDVWELGAEILDSLLERTGFEKGEINGLILSSSSTGAGNIF 62 Query: 61 WAQYMADVLGISPSWLELMGLGGVSSIGGVARAAMAIRGGMCSIALVLAAD---AQSSGA 117 W+Q AD L + + + + +GG S +G VARAA AI G+C L L AD A+++G Sbjct: 63 WSQTTADQLALELDFCQTVDIGGSSPVGTVARAAAAIDAGLCDTVLCLFADTAVAENNGR 122 Query: 118 TPEQGAQRHEFQYPTGLRGPVGAFGMIMRRYDHLYGLNRDALAKLAVTQRQHSILNDNAC 177 GA E+ P G G AFGM+ R YD +GL+ AL KLAV QR H++LN+NAC Sbjct: 123 PRSYGA---EWTTPYGYLGAPAAFGMLSRYYDDRFGLDARALGKLAVAQRAHAVLNENAC 179 Query: 178 PRLRKPMTEHDYLNSKLVSDPLRVLDSVMVCDGANAVLVMSAAEATRRGL-KAVYPTGYA 236 +LRKP+T DY++S++++DP+R+LD VM CDGA+ +L+ A +RGL + P GY Sbjct: 180 EKLRKPITVDDYVHSRMINDPIRLLDCVMPCDGASGILITRRKTAEQRGLTRCAVPVGYG 239 Query: 237 ERTHYKVTEPMTEIMDSGFLEVGPRALKQAGLEASDIQSFHPYDDFIIAIMLQLEQIGFC 296 ERT+ + + +G E G RA QAGL + I SFHPYDDFIIAIM+QLE +GFC Sbjct: 240 ERTNVGAASAIVDPTLTGHREAGERAFAQAGLRPAQIGSFHPYDDFIIAIMMQLEMLGFC 299 Query: 297 PQGAGADFVLSRDMTFKGDLPLNTGGGQISAGQPGLAGGGLNLVEAVRQMFGDGGPRQIK 356 G GA F+ D +F GDLPLNTGGGQISAGQ GLAGGG NLVEAVRQ+FG+GG RQ+ Sbjct: 300 AHGQGAAFIRETDFSFSGDLPLNTGGGQISAGQCGLAGGGTNLVEAVRQLFGEGGSRQVS 359 Query: 357 RTRNAMVTGIGGIPYARNWCTSGVMIL 383 T +A+VTGIGGIPY RNW +S V+IL Sbjct: 360 DTAHALVTGIGGIPYGRNWNSSTVLIL 386 >ref|YP_299472.1| hypothetical protein Reut_B5282 [Ralstonia eutropha JMP134] gb|AAZ64628.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 390 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 184/385 (47%), Positives = 257/385 (66%), Gaps = 4/385 (1%) Query: 1 MRDVAIVGYSETKIDVRTGRTSYELAGDALDEILVRTNVDKSEIDGLSVSET-MSESANP 59 +R+ AIV Y+ETK+ ++ R +EL + L+ +L R+ +K EIDGL ++ ++ + Sbjct: 4 LRESAIVAYAETKVMEKSDRDVWELDAEVLEALLERSGFEKGEIDGLVMAGFGLTAAGES 63 Query: 60 FWAQYMADVLGISPSWLELMGLGGVSSIGGVARAAMAIRGGMCSIALVLAADAQSSGATP 119 FWAQ AD LG+ + + + +GG S+ G VARAA AI G+C+ L+L AD + Sbjct: 64 FWAQVTADQLGLELDYCDQVHIGGCSATGSVARAAAAIDAGLCTTVLLLFADTGVAENNR 123 Query: 120 EQGAQRHEFQYPTGLRGPVGAFGMIMRRYDHLYGLNRDALAKLAVTQRQHSILNDNACPR 179 + R E+ P G+ GP AFG++ RRY+H YGL+ + L KLAVTQR H++LN+NAC + Sbjct: 124 GDRSFRREWADPYGVFGPPDAFGLLTRRYEHQYGLDYEMLGKLAVTQRAHAVLNENACEK 183 Query: 180 LRKPMTEHDYLNSKLVSDPLRVLDSVMVCDGANAVLVMSAAEATRRGL-KAVYPTGYAER 238 LRKP+T DYLNS++++DP+R+LD VM CD A+ +L+ S A +G+ K + P GY ER Sbjct: 184 LRKPITIDDYLNSRMIADPIRLLDCVMRCDAASGLLMTSRRRAREKGIDKFITPIGYGER 243 Query: 239 THYKVTEPMTEIMDSGFLEVGPRALKQAGLEASDIQSFHPYDDFIIAIMLQLEQIGFCPQ 298 T+++ E ++ SG G RAL QAGL D+ SFHPYDDFIIAIMLQLE GFC + Sbjct: 244 TNFQGGENFVDVTRSGHEACGKRALAQAGLALKDVASFHPYDDFIIAIMLQLEAFGFCGR 303 Query: 299 GAGADFVLSRDMTFKGDLPLNTGGGQISAGQPGLAGGGLNLVEAVRQMFGDGGPRQIKRT 358 G G F+ + +F GDLPLNTGGGQISAGQ NL+EA+RQ+ G+GG RQ++ T Sbjct: 304 GQGVQFIREMNFSFDGDLPLNTGGGQISAGQAACCSH--NLIEAIRQLMGEGGARQVRNT 361 Query: 359 RNAMVTGIGGIPYARNWCTSGVMIL 383 NA+V+GIG I Y+RNW TS ++L Sbjct: 362 ANALVSGIGWINYSRNWGTSSALVL 386