BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0022.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773912.1| dihydrodipicolinate synthase [Bradyrhizobium ja... 392 e-107 ref|YP_487562.1| dihydrodipicolinate synthetase [Rhodopseudomona... 390 e-106 ref|YP_570838.1| dihydrodipicolinate synthetase [Rhodopseudomona... 383 e-104 ref|ZP_08631043.1| dihydrodipicolinate synthase [Bradyrhizobiace... 374 e-101 ref|YP_001990762.1| dihydrodipicolinate synthetase [Rhodopseudom... 371 e-101 >ref|NP_773912.1| dihydrodipicolinate synthase [Bradyrhizobium japonicum USDA 110] dbj|BAC52537.1| bll7272 [Bradyrhizobium japonicum USDA 110] Length = 291 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/290 (63%), Positives = 233/290 (80%), Gaps = 1/290 (0%) Query: 25 MTKFRGVFPYLPTPLRSDGTVNGPALRAICDDLIKAGVHGLAALGSTGEYAYLNADARAD 84 M++F GVFPYL +P+ +DGTV L +CDDLI AGVHGL LGSTGE+AYLNA R Sbjct: 1 MSEFHGVFPYLVSPVDADGTVRTSVLAKLCDDLIGAGVHGLTPLGSTGEFAYLNAAQRTA 60 Query: 85 VVRHTADATQGRVPVIAGVAATTTREAIRQARRCKELGADCILLVLESYFPLDERQIESY 144 VV+ T +A +GRVPV+AGVA+T+T +A+ QAR ++LGAD IL +LE+YFPL + Q+ESY Sbjct: 61 VVQTTIEAAKGRVPVVAGVASTSTADAVTQARTYQKLGADGILAILEAYFPLADTQVESY 120 Query: 145 FRAVADSVALPLLIYTNPQFQKTDLSIDVIERLANHPQIQYVKDASNNTGRLLSIMNRC- 203 FRA+AD+V +P++IYTNPQFQ++DL++++I RLA HP+I Y+KDAS NTGRLLSIMNRC Sbjct: 121 FRAIADAVDIPVVIYTNPQFQRSDLTLEIIARLAEHPRIGYIKDASTNTGRLLSIMNRCG 180 Query: 204 PQLGIFAASSHVPVAVMMLGGLGWMAGPACILPRTSVRLYDLSVAGRWEEAAALQRRLWR 263 +L +F+AS+H+P AVM++GGLGWMAGPACI+PR SV LYDL AGRW+EA ALQRRLWR Sbjct: 181 DRLRVFSASAHIPAAVMLIGGLGWMAGPACIIPRQSVALYDLCRAGRWDEAMALQRRLWR 240 Query: 264 VNEVFARFNLAACIKYGLGLQGYDVGLPAEPQSPLSEAAGAEVSDILKEF 313 +NE FARFNLAACIK GL +QGYDVG P PQ+ L+ A V L+E Sbjct: 241 INEAFARFNLAACIKAGLSIQGYDVGDPIPPQAALTADARKVVETALREL 290 >ref|YP_487562.1| dihydrodipicolinate synthetase [Rhodopseudomonas palustris HaA2] gb|ABD08651.1| Dihydrodipicolinate synthetase [Rhodopseudomonas palustris HaA2] Length = 291 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/290 (64%), Positives = 229/290 (78%), Gaps = 1/290 (0%) Query: 25 MTKFRGVFPYLPTPLRSDGTVNGPALRAICDDLIKAGVHGLAALGSTGEYAYLNADARAD 84 MT+FRGVFPYL +PL SDG V G L +CDDL+KAGVHGL LGSTGE+AYL A R Sbjct: 1 MTEFRGVFPYLVSPLESDGRVRGEVLGRLCDDLVKAGVHGLTPLGSTGEFAYLGAAQRTA 60 Query: 85 VVRHTADATQGRVPVIAGVAATTTREAIRQARRCKELGADCILLVLESYFPLDERQIESY 144 VV+ T +A GRVPV+AGVA+T+T +A+ QAR ++ GAD IL +LE+YFPL + QIESY Sbjct: 61 VVQATIEAAAGRVPVVAGVASTSTADAVAQARAYQKHGADGILAILEAYFPLKDAQIESY 120 Query: 145 FRAVADSVALPLLIYTNPQFQKTDLSIDVIERLANHPQIQYVKDASNNTGRLLSIMNRC- 203 FRA+AD+V +P++IYTNPQFQ++DL++DVI RLA HP+I+Y+KDAS NTGRLLSIMNRC Sbjct: 121 FRAIADAVDIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDASTNTGRLLSIMNRCG 180 Query: 204 PQLGIFAASSHVPVAVMMLGGLGWMAGPACILPRTSVRLYDLSVAGRWEEAAALQRRLWR 263 L +F+AS+H+P AVM++GG+GWMAGPACI PR SVRLY+L A RW+EA LQR+LWR Sbjct: 181 DSLRVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVRLYELCKAQRWDEALTLQRKLWR 240 Query: 264 VNEVFARFNLAACIKYGLGLQGYDVGLPAEPQSPLSEAAGAEVSDILKEF 313 VNE FA+FNLAACIK GL LQGYDVG P PQ+ L+ V +L E Sbjct: 241 VNEAFAKFNLAACIKAGLALQGYDVGDPVPPQAALTAEERKAVEKVLAEI 290 >ref|YP_570838.1| dihydrodipicolinate synthetase [Rhodopseudomonas palustris BisB5] gb|ABE40937.1| dihydrodipicolinate synthetase [Rhodopseudomonas palustris BisB5] Length = 291 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/290 (62%), Positives = 229/290 (78%), Gaps = 1/290 (0%) Query: 25 MTKFRGVFPYLPTPLRSDGTVNGPALRAICDDLIKAGVHGLAALGSTGEYAYLNADARAD 84 MT FRGVFPYL +P+ +DG + G L +CDDL+KAGVHGL LGSTGE+AYLNA R Sbjct: 1 MTDFRGVFPYLVSPVEADGRLRGDVLGRLCDDLVKAGVHGLTPLGSTGEFAYLNATQREA 60 Query: 85 VVRHTADATQGRVPVIAGVAATTTREAIRQARRCKELGADCILLVLESYFPLDERQIESY 144 VV+ T +A GRVPV+AGVA+T+T +A+ QA+ ++ GAD IL +LE+YFPL + QIESY Sbjct: 61 VVQATIEAAAGRVPVVAGVASTSTADAVAQAKVYEKRGADGILAILEAYFPLKDAQIESY 120 Query: 145 FRAVADSVALPLLIYTNPQFQKTDLSIDVIERLANHPQIQYVKDASNNTGRLLSIMNRC- 203 FRA+AD+V +P++IYTNPQFQ++DL++DVI RLA HP+I+Y+KDAS NTGRLLSI+NRC Sbjct: 121 FRAIADAVGIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDASTNTGRLLSIINRCG 180 Query: 204 PQLGIFAASSHVPVAVMMLGGLGWMAGPACILPRTSVRLYDLSVAGRWEEAAALQRRLWR 263 L +F+AS+H+P AVM++GG+GWMAGPACI PR SVRLY+L A +W+EA LQRRLWR Sbjct: 181 DSLRVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVRLYELCKAAQWDEALTLQRRLWR 240 Query: 264 VNEVFARFNLAACIKYGLGLQGYDVGLPAEPQSPLSEAAGAEVSDILKEF 313 VNE FARFNLAACIK GL +QGY+VG P PQ+ L+ V +L E Sbjct: 241 VNEAFARFNLAACIKAGLAIQGYEVGDPVPPQAALTADERKAVEAVLAEI 290 >ref|ZP_08631043.1| dihydrodipicolinate synthase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06144.1| dihydrodipicolinate synthase [Bradyrhizobiaceae bacterium SG-6C] Length = 299 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/288 (61%), Positives = 223/288 (77%), Gaps = 1/288 (0%) Query: 28 FRGVFPYLPTPLRSDGTVNGPALRAICDDLIKAGVHGLAALGSTGEYAYLNADARADVVR 87 GVFPYL +P +DG + L +CDDLIKAGVHGL LGSTGE+AYL A R VV Sbjct: 12 LHGVFPYLVSPTAADGRIKTDVLGRLCDDLIKAGVHGLTPLGSTGEFAYLGAAQRTAVVT 71 Query: 88 HTADATQGRVPVIAGVAATTTREAIRQARRCKELGADCILLVLESYFPLDERQIESYFRA 147 T +AT RVPVIAGVA+T+T +A+ QA+ + LGAD IL V+E+YFP+ + Q+E+YFRA Sbjct: 72 ATIEATAKRVPVIAGVASTSTADAVAQAKSYQALGADGILAVMEAYFPVKDAQVEAYFRA 131 Query: 148 VADSVALPLLIYTNPQFQKTDLSIDVIERLANHPQIQYVKDASNNTGRLLSIMNRC-PQL 206 +AD+V +P++IYTNP FQ++DL++DVI RLA HP+I +KDASNNTGRLLSI NRC +L Sbjct: 132 IADAVDIPVVIYTNPNFQRSDLTLDVIARLAEHPRIVAIKDASNNTGRLLSIRNRCGDKL 191 Query: 207 GIFAASSHVPVAVMMLGGLGWMAGPACILPRTSVRLYDLSVAGRWEEAAALQRRLWRVNE 266 +FAAS+H+P AVMM+GG GWMAGPACI+PR SV+LY+L AG+W EA LQR+LWR+NE Sbjct: 192 DVFAASAHIPAAVMMIGGKGWMAGPACIVPRQSVQLYELCKAGQWSEAMTLQRKLWRINE 251 Query: 267 VFARFNLAACIKYGLGLQGYDVGLPAEPQSPLSEAAGAEVSDILKEFG 314 VFARFNLAACIK GL LQGYDVG P PQ+PL+ V +L++ G Sbjct: 252 VFARFNLAACIKAGLQLQGYDVGDPVAPQTPLTADERKVVEGVLQDLG 299 >ref|YP_001990762.1| dihydrodipicolinate synthetase [Rhodopseudomonas palustris TIE-1] gb|ACF00287.1| dihydrodipicolinate synthetase [Rhodopseudomonas palustris TIE-1] Length = 291 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/291 (60%), Positives = 224/291 (76%), Gaps = 1/291 (0%) Query: 25 MTKFRGVFPYLPTPLRSDGTVNGPALRAICDDLIKAGVHGLAALGSTGEYAYLNADARAD 84 MT F GVFPYL +P+ ++G V + +CDDLI+AGVHGL LGSTGE+AYL R Sbjct: 1 MTDFHGVFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREA 60 Query: 85 VVRHTADATQGRVPVIAGVAATTTREAIRQARRCKELGADCILLVLESYFPLDERQIESY 144 VVR T +A Q RVPV+AGVA+T+ +A+ QA+ ++LGAD IL +LE+YFPL + QIESY Sbjct: 61 VVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESY 120 Query: 145 FRAVADSVALPLLIYTNPQFQKTDLSIDVIERLANHPQIQYVKDASNNTGRLLSIMNRC- 203 FRA+AD+V +P++IYTNPQFQ++DL++D+I RLA HP+I+Y+KDAS NTGRLLSI+NRC Sbjct: 121 FRAIADAVEIPVVIYTNPQFQRSDLTLDLIARLAEHPRIRYIKDASTNTGRLLSIINRCG 180 Query: 204 PQLGIFAASSHVPVAVMMLGGLGWMAGPACILPRTSVRLYDLSVAGRWEEAAALQRRLWR 263 L +F+AS+H+P AVM++GG+GWMAGPACI PR SV LY+L A RW+EA LQR+LWR Sbjct: 181 DALQVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVALYELCKAQRWDEALMLQRKLWR 240 Query: 264 VNEVFARFNLAACIKYGLGLQGYDVGLPAEPQSPLSEAAGAEVSDILKEFG 314 VNE FA+FNLAACIK GL LQGYDVG P PQ+ L+ V +L E Sbjct: 241 VNEAFAKFNLAACIKAGLSLQGYDVGDPIPPQAALTAEERKAVEKVLAEIA 291