BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0251.0015.p         (226 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_486713.1| molybdopterin dehydrogenase, FAD-binding [Rhodo...   230   1e-58
ref|YP_486722.1| molybdopterin dehydrogenase, FAD-binding [Rhodo...   187   1e-45
ref|YP_003321048.1| molybdopterin dehydrogenase FAD-binding prot...   138   5e-31
ref|YP_145830.1| nicotine dehydrogenase chain A [Geobacillus kau...   137   9e-31
ref|YP_787236.1| carbon monoxide dehydrogenase medium chain [Bor...   135   5e-30

>ref|YP_486713.1| molybdopterin dehydrogenase, FAD-binding [Rhodopseudomonas
           palustris HaA2]
 gb|ABD07802.1| Molybdopterin dehydrogenase, FAD-binding [Rhodopseudomonas
           palustris HaA2]
          Length = 285

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 124/137 (90%)

Query: 1   MKPPAFEYAAPSTLAEAVSLLASRNGNAKVISGGQSLMPMLAYRLAAPELLVDLRHLKDL 60
           MKPPAF+YA+PS++AEAV LL SRNGNAKV++GGQSLMPMLA+RLAAPELLVDL+ LK L
Sbjct: 1   MKPPAFDYASPSSIAEAVDLLGSRNGNAKVLAGGQSLMPMLAFRLAAPELLVDLKQLKGL 60

Query: 61  AAIRIEADGVRLGAKVRWCDIENDRRLAVSHPLLAEAIKHVAHYQIRNRGTVGGSVAHAD 120
             I I ADGVRLGAKVRW DIE D+RLA +HPLL EAIKHVAHYQIRNRGTVGGS+AHAD
Sbjct: 61  DRIDIGADGVRLGAKVRWRDIEADQRLATAHPLLCEAIKHVAHYQIRNRGTVGGSLAHAD 120

Query: 121 PSAEMPGVALTCDARMT 137
           PSAEMPGVA+TCDA +T
Sbjct: 121 PSAEMPGVAITCDAELT 137


>ref|YP_486722.1| molybdopterin dehydrogenase, FAD-binding [Rhodopseudomonas
           palustris HaA2]
 gb|ABD07811.1| Molybdopterin dehydrogenase, FAD-binding [Rhodopseudomonas
           palustris HaA2]
          Length = 290

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 90/138 (65%), Positives = 109/138 (78%), Gaps = 1/138 (0%)

Query: 1   MKPPAFEYAAPSTLAEAVSLLASRNGNAKVISGGQSLMPMLAYRLAAPELLVDLRHLKDL 60
           MK P F+YA P+TL EAV LLA+ +G AKV+SGGQSL+P+LA+R+A P LLVD++ L  L
Sbjct: 1   MKMPPFDYACPATLDEAVRLLAANDG-AKVLSGGQSLLPLLAFRMAYPPLLVDIQKLPGL 59

Query: 61  AAIRIEADGVRLGAKVRWCDIENDRRLAVSHPLLAEAIKHVAHYQIRNRGTVGGSVAHAD 120
             I + A+G+R+GA+VRWC IE D RLA +HPL    I HVAHYQIRNRGTVGGS+AHAD
Sbjct: 60  ETIDVTANGLRVGARVRWCQIEQDARLATAHPLFQAMIDHVAHYQIRNRGTVGGSLAHAD 119

Query: 121 PSAEMPGVALTCDARMTA 138
           PSAEMPGVAL CD  + A
Sbjct: 120 PSAEMPGVALVCDCEIVA 137


>ref|YP_003321048.1| molybdopterin dehydrogenase FAD-binding protein [Sphaerobacter
           thermophilus DSM 20745]
 gb|ACZ40226.1| molybdopterin dehydrogenase FAD-binding protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 292

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 2/171 (1%)

Query: 1   MKPPAFEYAAPSTLAEAVSLLASRNGNAKVISGGQSLMPMLAYRLAAPELLVDLRHLKDL 60
           MKPP+FEY  P+TL EAV+LLA   G AKV++GGQSL+PM+  RLA P  LVDL  + +L
Sbjct: 1   MKPPSFEYFVPTTLDEAVALLAQHGGEAKVLAGGQSLVPMMNLRLARPAALVDLNRITEL 60

Query: 61  AAIRIEADGVRLGAKVRWCDIENDRRLAVSHPLLAEAIKHVAHYQIRNRGTVGGSVAHAD 120
             +R E   V +GA  R   +E    +A   PL+  AI+ + H  +RNRGTV GS+AHAD
Sbjct: 61  DYVRAENGHVTIGALARQRAVERSSDVAERQPLIGAAIRLIGHPAVRNRGTVVGSLAHAD 120

Query: 121 PSAEMPGVALTCDARM--TASRRRRISSPVRWRPALSRTKFSPRCICRRGR 169
           P+AE+P VA+  DA M  T S   R+ +   +  +      SP  + +  R
Sbjct: 121 PAAELPAVAVALDAEMVVTGSSGERVVAADDFFVSYLTVDLSPDEVLKEVR 171


>ref|YP_145830.1| nicotine dehydrogenase chain A [Geobacillus kaustophilus HTA426]
 dbj|BAD74262.1| nicotine dehydrogenase chain A [Geobacillus kaustophilus HTA426]
          Length = 291

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 93/135 (68%)

Query: 1   MKPPAFEYAAPSTLAEAVSLLASRNGNAKVISGGQSLMPMLAYRLAAPELLVDLRHLKDL 60
           MKPP F+Y  P T+ +A+ LL     N K+I+GGQS+MP+L  RL+ PELL+D+  L++L
Sbjct: 1   MKPPLFDYYKPETVDQALELLQEYGINGKIIAGGQSMMPILNMRLSTPELLIDISGLQEL 60

Query: 61  AAIRIEADGVRLGAKVRWCDIENDRRLAVSHPLLAEAIKHVAHYQIRNRGTVGGSVAHAD 120
           + IR+E   +++GA  R  D+E    +  + PLL+EAI ++ H Q RNRGT GGS+AHAD
Sbjct: 61  SYIRVEDGFLKIGALTRQRDVELSPLVREACPLLSEAIPYIGHMQTRNRGTFGGSLAHAD 120

Query: 121 PSAEMPGVALTCDAR 135
           P+AE+P   L  DA+
Sbjct: 121 PTAEIPMTLLALDAQ 135


>ref|YP_787236.1| carbon monoxide dehydrogenase medium chain [Bordetella avium 197N]
 emb|CAJ50349.1| carbon monoxide dehydrogenase medium chain [Bordetella avium 197N]
          Length = 291

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 93/142 (65%), Gaps = 1/142 (0%)

Query: 1   MKPPAFEYAAPSTLAEAVSLLASRNGNAKVISGGQSLMPMLAYRLAAPELLVDLRHLKDL 60
           MK P F+Y AP TLA A+ LL+S+  NA+V++GGQSLM ML  R A P+ LVD+  L +L
Sbjct: 1   MKAPVFDYYAPDTLAAALDLLSSQE-NARVLAGGQSLMAMLNMRFAFPDCLVDINALSEL 59

Query: 61  AAIRIEADGVRLGAKVRWCDIENDRRLAVSHPLLAEAIKHVAHYQIRNRGTVGGSVAHAD 120
           A IR E   VR+GA  R  D+E    +A+  PL  EAI +V H Q RNRGTVGGS+   D
Sbjct: 60  AYIREEEGQVRVGAMTRQRDVEFSELIAMRLPLWKEAILNVGHRQTRNRGTVGGSLCQLD 119

Query: 121 PSAEMPGVALTCDARMTASRRR 142
           PSAE+P V +  DA +T S  R
Sbjct: 120 PSAEIPTVCMAMDAVLTVSSVR 141