BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0013.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_486712.1| (2Fe-2S)-binding protein [Rhodopseudomonas palu... 266 6e-70 ref|YP_486721.1| (2Fe-2S)-binding protein [Rhodopseudomonas palu... 230 5e-59 ref|ZP_06849988.1| aerobic-type carbon monoxide dehydrogenase sm... 182 1e-44 ref|YP_002524058.1| carbon monoxide dehydrogenase small chain (C... 181 3e-44 ref|YP_004336169.1| carbon-monoxide dehydrogenase [Pseudonocardi... 179 8e-44 >ref|YP_486712.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD07801.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] Length = 156 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 125/151 (82%), Positives = 138/151 (91%) Query: 1 MKIEFSLNGKPVSADVEPRTTLADCIRDDLGQTGTHLACEHGVCGACTVLVNDEAVRSCL 60 M ++F LNG+PVSA+VEPRTTLADCIR+D GQTGTHLACEHGVCGACTVLVN EAVR+CL Sbjct: 1 MHVQFKLNGQPVSAEVEPRTTLADCIRNDFGQTGTHLACEHGVCGACTVLVNGEAVRACL 60 Query: 61 MLAVQAQGERVVTVEGLSGDELTPLQTAFRKHHGLQCGFCTPGFITTAHALLSHEPYADE 120 MLA Q +G+ V TVEGLSGDELTPLQ AFRKHH LQCGFCTPGFITTAHALLS EP A E Sbjct: 61 MLAAQVEGDAVTTVEGLSGDELTPLQKAFRKHHALQCGFCTPGFITTAHALLSSEPDASE 120 Query: 121 ERIREVLSGNLCRCSGYVPIVEAVLEARSSY 151 ERIREVLSGNLCRC+GYVPIV+AV+EAR++Y Sbjct: 121 ERIREVLSGNLCRCTGYVPIVDAVMEARAAY 151 >ref|YP_486721.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD07810.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] Length = 162 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 104/152 (68%), Positives = 131/152 (86%), Gaps = 1/152 (0%) Query: 2 KIEFSLNGKPVSADVEPRTTLADCIRDDLGQTGTHLACEHGVCGACTVLVNDEAVRSCLM 61 ++EF LNG PV+A++EPR TL DCIR +LG+TGTH+ CEHGVCGACT++++ EAVRSCL Sbjct: 4 RVEFELNGAPVAAEIEPRLTLGDCIRHELGKTGTHIGCEHGVCGACTIIIDGEAVRSCLT 63 Query: 62 LAVQAQGERVVTVEGLS-GDELTPLQTAFRKHHGLQCGFCTPGFITTAHALLSHEPYADE 120 L VQ G+ V+T+EGL+ GD L PLQ +F+KHHGLQCGFCTPGF+ TAHALL+ EP ADE Sbjct: 64 LGVQVAGKSVMTIEGLADGDNLGPLQASFQKHHGLQCGFCTPGFLMTAHALLTREPDADE 123 Query: 121 ERIREVLSGNLCRCSGYVPIVEAVLEARSSYQ 152 ERIR+VLSGN+CRC+GY+ IV+AV+EAR +YQ Sbjct: 124 ERIRDVLSGNVCRCTGYLSIVKAVMEARPAYQ 155 >ref|ZP_06849988.1| aerobic-type carbon monoxide dehydrogenase small subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gb|EFG76652.1| aerobic-type carbon monoxide dehydrogenase small subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 161 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/153 (60%), Positives = 109/153 (71%), Gaps = 2/153 (1%) Query: 3 IEFSLNGKPVSADVEPRTTLADCIRDDLGQTGTHLACEHGVCGACTVLVNDEAVRSCLML 62 IE S+NG PV+A VEPR TLAD +RD G TGTHL CEHG CGACTVL++ EAVRSCLM Sbjct: 6 IELSVNGTPVAAGVEPRMTLADFLRDTCGLTGTHLGCEHGACGACTVLLDGEAVRSCLMF 65 Query: 63 AVQAQGERVVTVEGLSGDE--LTPLQTAFRKHHGLQCGFCTPGFITTAHALLSHEPYADE 120 AVQA G V TVEG++ + L+P+Q+A R+ HGLQCGFCTPGF+ + ALL P + Sbjct: 66 AVQADGTEVTTVEGIAAPDGTLSPVQSALRECHGLQCGFCTPGFVMSLTALLRDNPDPSD 125 Query: 121 ERIREVLSGNLCRCSGYVPIVEAVLEARSSYQV 153 E IRE LSGN CRC+GY IV A A + V Sbjct: 126 EEIREGLSGNFCRCTGYQGIVAAARRAAETQSV 158 >ref|YP_002524058.1| carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) [Thermomicrobium roseum DSM 5159] gb|ACM06593.1| carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) [Thermomicrobium roseum DSM 5159] Length = 161 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/151 (58%), Positives = 108/151 (71%), Gaps = 1/151 (0%) Query: 3 IEFSLNGKPVSADVEPRTTLADCIRDDLGQTGTHLACEHGVCGACTVLVNDEAVRSCLML 62 I ++NG+ +SA+VE R TLAD +R+ LG TGT L CEHGVCG+CTVL + AVRSCL+L Sbjct: 6 ITLTVNGRSISAEVEARMTLADFLREQLGLTGTKLGCEHGVCGSCTVLWDGAAVRSCLVL 65 Query: 63 AVQAQGERVVTVEGL-SGDELTPLQTAFRKHHGLQCGFCTPGFITTAHALLSHEPYADEE 121 A QA G + T+EGL +G+ + P+Q AF +HHGLQCGFCTPG + TA ALL P EE Sbjct: 66 AAQADGANLTTIEGLATGEAMHPVQQAFWEHHGLQCGFCTPGMVLTAVALLEENPAPSEE 125 Query: 122 RIREVLSGNLCRCSGYVPIVEAVLEARSSYQ 152 IRE LSGNLCRC+GY IV AV A Q Sbjct: 126 EIREALSGNLCRCTGYQNIVRAVRAAAEQMQ 156 >ref|YP_004336169.1| carbon-monoxide dehydrogenase [Pseudonocardia dioxanivorans CB1190] gb|AEA28316.1| Carbon-monoxide dehydrogenase (acceptor) [Pseudonocardia dioxanivorans CB1190] Length = 153 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 92/149 (61%), Positives = 108/149 (72%), Gaps = 2/149 (1%) Query: 1 MKIEFSLNGKPVSADVEPRTTLADCIRDDLGQTGTHLACEHGVCGACTVLVNDEAVRSCL 60 M+I ++G+ V VEPR TLAD +R+ G+TGTH+ CEHGVCGACTVLV+DE VRSCL Sbjct: 1 MEITMVVDGERVELTVEPRHTLADVLREQCGRTGTHVGCEHGVCGACTVLVDDEPVRSCL 60 Query: 61 MLAVQAQGERVVTVEGLSGDE--LTPLQTAFRKHHGLQCGFCTPGFITTAHALLSHEPYA 118 M AVQA G V TVEGL D+ L PLQ AF HHGLQCGFCTPG + TA LL P Sbjct: 61 MFAVQADGSTVRTVEGLESDDGTLHPLQEAFVAHHGLQCGFCTPGMLMTALHLLDTHPEP 120 Query: 119 DEERIREVLSGNLCRCSGYVPIVEAVLEA 147 D E IR +SGN+CRC+GY+ IV+AV EA Sbjct: 121 DRETIRREMSGNICRCTGYMGIVDAVEEA 149