BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0010.p (212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_486710.1| TetR family transcriptional regulator [Rhodopse... 318 4e-85 ref|YP_002289858.1| transcriptional regulator, TetR family [Olig... 278 4e-73 gb|AEJ26337.1| Transcriptional regulator TetR family [Paracoccus... 178 5e-43 ref|YP_002943780.1| TetR family transcriptional regulator [Vario... 176 2e-42 ref|YP_004156239.1| TetR family transcriptional regulator [Vario... 174 5e-42 >ref|YP_486710.1| TetR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD07799.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris HaA2] Length = 230 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 150/204 (73%), Positives = 177/204 (86%) Query: 1 LKLAIEEFARIGFEGARVDRIAERCGLSKNMLYYYFKSKEGLFVAALERMYEDFRNQQSD 60 LKLA+EEFAR GF+GARVDRIAER +SKNMLYYYFKSKEGLFVAALERMYE+ R+QQ + Sbjct: 16 LKLAMEEFARTGFDGARVDRIAERSKVSKNMLYYYFKSKEGLFVAALERMYEEVRDQQRE 75 Query: 61 LSVRASDPVLALKQLIEHTFVALESNPNAIRLLNEENKHRGKYIRKSKRIRELYNPLVET 120 LSVRA DP+LA+KQL+EHTF ALESNPNAIRL+NEENK RG+++RKSKRIR+LYNPLVET Sbjct: 76 LSVRAHDPILAMKQLVEHTFQALESNPNAIRLMNEENKQRGRFLRKSKRIRDLYNPLVET 135 Query: 121 LSFILERGSRDGTFRSGLDPAVVYLTLSSLCYHYLSNQYTLENALNKDLSSASSREHWLK 180 +SFILERG +G FR GLD AVVY+TLSSLCYHYLSN+YTLE AL KDL+SA+SR+ W++ Sbjct: 136 ISFILERGRVEGVFRPGLDSAVVYMTLSSLCYHYLSNRYTLEIALGKDLASAASRKAWVE 195 Query: 181 HVTNLVLQYCVLDPGAALERKSNV 204 HV N+VL YC + + K+ V Sbjct: 196 HVGNIVLLYCTAEVPSTTAAKTAV 219 >ref|YP_002289858.1| transcriptional regulator, TetR family [Oligotropha carboxidovorans OM5] ref|YP_004632156.1| TetR/AcrR family transcriptional regulator [Oligotropha carboxidovorans OM5] gb|ACI93993.1| transcriptional regulator, TetR family [Oligotropha carboxidovorans OM5] gb|AEI02339.1| transcriptional regulator, TetR/AcrR family [Oligotropha carboxidovorans OM4] gb|AEI05915.1| transcriptional regulator, TetR/AcrR family [Oligotropha carboxidovorans OM5] Length = 228 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 126/194 (64%), Positives = 152/194 (78%) Query: 1 LKLAIEEFARIGFEGARVDRIAERCGLSKNMLYYYFKSKEGLFVAALERMYEDFRNQQSD 60 LK A +EFAR GF GAR DRIA RC LSKNMLYYYFKSKEGLF+A LERMY+ R+ Q D Sbjct: 16 LKYATDEFARFGFGGARTDRIAARCKLSKNMLYYYFKSKEGLFIAVLERMYQTLRDNQRD 75 Query: 61 LSVRASDPVLALKQLIEHTFVALESNPNAIRLLNEENKHRGKYIRKSKRIRELYNPLVET 120 LS+RASDP+ AL+QLI HTF A ESNPN I LLNEENKHR KYIRKS R RE+Y PL++T Sbjct: 76 LSIRASDPLRALEQLIRHTFHAFESNPNTILLLNEENKHRAKYIRKSHRTREMYYPLIDT 135 Query: 121 LSFILERGSRDGTFRSGLDPAVVYLTLSSLCYHYLSNQYTLENALNKDLSSASSREHWLK 180 + +LE+G R+G FR GLDP VYLTL+S+CYH LSNQYTLE ALN++ + + WL Sbjct: 136 VGLVLEKGQREGVFRPGLDPTDVYLTLASMCYHVLSNQYTLEIALNRNFGATRVKSKWLD 195 Query: 181 HVTNLVLQYCVLDP 194 H+ +++ YC+L+P Sbjct: 196 HIVDVISMYCMLEP 209 >gb|AEJ26337.1| Transcriptional regulator TetR family [Paracoccus denitrificans SD1] Length = 222 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 123/194 (63%) Query: 1 LKLAIEEFARIGFEGARVDRIAERCGLSKNMLYYYFKSKEGLFVAALERMYEDFRNQQSD 60 L A EFAR G++GARVD I R +SKN+LY+YF+ KE L++ LER+YE R +QSD Sbjct: 18 LAAAQAEFARRGYDGARVDAIVARAKVSKNLLYHYFRGKEDLYIRILERVYETLRRRQSD 77 Query: 61 LSVRASDPVLALKQLIEHTFVALESNPNAIRLLNEENKHRGKYIRKSKRIRELYNPLVET 120 ++V DP+ A+ +L E+TF P+ I +LN EN HR ++I KS IR +Y+ L ET Sbjct: 78 VAVNGLDPLNAMIRLCENTFRVFVEEPDVIIMLNTENLHRARHIGKSTIIRSMYDRLAET 137 Query: 121 LSFILERGSRDGTFRSGLDPAVVYLTLSSLCYHYLSNQYTLENALNKDLSSASSREHWLK 180 L IL +G G FR G+DP +Y+++S L Y YLSNQYTL N+ L + EH Sbjct: 138 LREILRQGEEQGVFRKGVDPVELYISISGLGYFYLSNQYTLSMLFNRKLGAPEHIEHRQA 197 Query: 181 HVTNLVLQYCVLDP 194 H+ ++V+ Y +P Sbjct: 198 HLVDMVISYLTREP 211 >ref|YP_002943780.1| TetR family transcriptional regulator [Variovorax paradoxus S110] gb|ACS18514.1| transcriptional regulator, TetR family [Variovorax paradoxus S110] Length = 218 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/191 (45%), Positives = 126/191 (65%) Query: 1 LKLAIEEFARIGFEGARVDRIAERCGLSKNMLYYYFKSKEGLFVAALERMYEDFRNQQSD 60 L A +EFA+ G GAR+D IAER GL+K ++YYYF SK+ LF+A LER Y D R + Sbjct: 27 LASARDEFAQRGLAGARMDSIAERAGLNKRLIYYYFGSKDDLFLAVLERTYADIREAEQR 86 Query: 61 LSVRASDPVLALKQLIEHTFVALESNPNAIRLLNEENKHRGKYIRKSKRIRELYNPLVET 120 L + DPV A++QL+ T+ +P I LLN EN H ++++S+RI+E+ +PLV+ Sbjct: 87 LHLDEIDPVEAIRQLVSFTWHYYLEHPEFITLLNSENLHCAAHLKRSERIQEMNSPLVQL 146 Query: 121 LSFILERGSRDGTFRSGLDPAVVYLTLSSLCYHYLSNQYTLENALNKDLSSASSREHWLK 180 L +LERG RD FR+G+DP +Y++++SLCY YLSN +TL +DL + + L Sbjct: 147 LDTVLERGRRDKLFRAGVDPVQLYISIASLCYFYLSNNHTLSAIFGRDLRAPKAMAQRLS 206 Query: 181 HVTNLVLQYCV 191 H+T+LVL Y + Sbjct: 207 HMTDLVLGYVL 217 >ref|YP_004156239.1| TetR family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU38128.1| regulatory protein TetR [Variovorax paradoxus EPS] Length = 218 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 84/191 (43%), Positives = 126/191 (65%) Query: 1 LKLAIEEFARIGFEGARVDRIAERCGLSKNMLYYYFKSKEGLFVAALERMYEDFRNQQSD 60 L A EEF+++G GAR+D IA R GL+K ++YYYF SK+ LF+A LER Y D R + Sbjct: 27 LAAAREEFSQLGLAGARMDSIATRAGLNKRLIYYYFGSKDDLFLAVLERTYADIREAEQR 86 Query: 61 LSVRASDPVLALKQLIEHTFVALESNPNAIRLLNEENKHRGKYIRKSKRIRELYNPLVET 120 L + +PV A++QL+ T+ +P I LLN EN HR ++++S+RI+E+ +PLV+ Sbjct: 87 LHLDEIEPVEAIRQLVSFTWHYYLEHPEFITLLNSENLHRAAHLKRSERIQEMNSPLVQL 146 Query: 121 LSFILERGSRDGTFRSGLDPAVVYLTLSSLCYHYLSNQYTLENALNKDLSSASSREHWLK 180 L +LERG R+ F +G+DP +Y++++SLCY YLSN +TL +DL + + L Sbjct: 147 LDTVLERGRRENLFHAGVDPVQLYISIASLCYFYLSNNHTLSAIFGRDLRAPKAMAQRLS 206 Query: 181 HVTNLVLQYCV 191 H+T+LVL Y + Sbjct: 207 HMTDLVLGYVL 217