BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0250.0017.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767145.1| hypothetical protein bll0505 [Bradyrhizobium ja... 493 e-137 ref|YP_001236536.1| putative oxidoreductase [Bradyrhizobium sp. ... 484 e-135 ref|YP_001202550.1| putative oxidoreductase molybdopterin bindin... 478 e-133 ref|ZP_08627990.1| sulfite oxidase-like protein [Bradyrhizobiace... 472 e-131 ref|ZP_07026301.1| oxidoreductase molybdopterin binding [Afipia ... 451 e-125 >ref|NP_767145.1| hypothetical protein bll0505 [Bradyrhizobium japonicum USDA 110] dbj|BAC45770.1| bll0505 [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 228/257 (88%), Positives = 245/257 (95%) Query: 5 RKLLIPGVDKKLLVRDAVKTMPELTRRRFITAGTSLGALTLLTGCDVVDSSSAEEMLKHV 64 R LIPGVDK+LL++DA+KTMP+ TRRRFI G SLGALTLLTGCDVVDSSSA+ +L V Sbjct: 4 RSFLIPGVDKRLLIKDAIKTMPDFTRRRFIAGGASLGALTLLTGCDVVDSSSADTLLAQV 63 Query: 65 SKFNDAVQAWMFNPDALAPTFPESMITKPFPFNAYYDLDDAPEIAGADWKLEVRGLVENK 124 SKFNDAVQA++FNPDALAPTFPES ITKPFPFNAYYDLDDAPE++ ADWKLEVRGLV+NK Sbjct: 64 SKFNDAVQAFIFNPDALAPTFPESAITKPFPFNAYYDLDDAPEVSAADWKLEVRGLVDNK 123 Query: 125 KSWTLDELYKLPQVKQVTRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFQCADK 184 KSWTLDELYKLPQV Q+TRHICVEGWSAIGSWTGTPLRDFLKL+GADTRAKYVWFQCADK Sbjct: 124 KSWTLDELYKLPQVTQITRHICVEGWSAIGSWTGTPLRDFLKLIGADTRAKYVWFQCADK 183 Query: 185 DGYNSPLDMRSALHPQTQMTFKFADEILPRAYGFPMKIRVPTKLGFKNPKYVLSMEVTND 244 DGYNSPLDMRSALHPQTQMTFK+A+EILPRAYGFPMKIRVPTKLGFKNPKYV+SMEVTND Sbjct: 184 DGYNSPLDMRSALHPQTQMTFKYANEILPRAYGFPMKIRVPTKLGFKNPKYVISMEVTND 243 Query: 245 YKGGYWEDQGYNSFSGS 261 YKGGYWEDQGYNSFSGS Sbjct: 244 YKGGYWEDQGYNSFSGS 260 >ref|YP_001236536.1| putative oxidoreductase [Bradyrhizobium sp. BTAi1] gb|ABQ32630.1| putative oxidoreductase molybdopterin binding protein [Bradyrhizobium sp. BTAi1] Length = 260 Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust. Identities = 225/257 (87%), Positives = 244/257 (94%) Query: 5 RKLLIPGVDKKLLVRDAVKTMPELTRRRFITAGTSLGALTLLTGCDVVDSSSAEEMLKHV 64 R LIPGVDK+LL++D++KTMP+LTRRRF+T G SLGALTLLTGCDVVDS +AEE+LK V Sbjct: 4 RPFLIPGVDKRLLIKDSLKTMPDLTRRRFLTGGASLGALTLLTGCDVVDSDTAEELLKKV 63 Query: 65 SKFNDAVQAWMFNPDALAPTFPESMITKPFPFNAYYDLDDAPEIAGADWKLEVRGLVENK 124 SKFNDAVQAWMFNPDALAPTFPES ITKPFPFNAYY LD+APEI ADWKL+VRGLV+NK Sbjct: 64 SKFNDAVQAWMFNPDALAPTFPESAITKPFPFNAYYTLDEAPEIDAADWKLDVRGLVDNK 123 Query: 125 KSWTLDELYKLPQVKQVTRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFQCADK 184 KSWTLDEL+ LPQV QVTRHICVEGWSAIGSWTGTPLRDFLKL+GADTRAKYVWF CADK Sbjct: 124 KSWTLDELHALPQVTQVTRHICVEGWSAIGSWTGTPLRDFLKLIGADTRAKYVWFNCADK 183 Query: 185 DGYNSPLDMRSALHPQTQMTFKFADEILPRAYGFPMKIRVPTKLGFKNPKYVLSMEVTND 244 DGYNSPLDMR+ALHPQTQMTFKFAD+ILPRAYG+PMKIRVPTKLGFKNPKYV++MEVTND Sbjct: 184 DGYNSPLDMRTALHPQTQMTFKFADQILPRAYGYPMKIRVPTKLGFKNPKYVVAMEVTND 243 Query: 245 YKGGYWEDQGYNSFSGS 261 YKGGYWEDQGYNSFSGS Sbjct: 244 YKGGYWEDQGYNSFSGS 260 >ref|YP_001202550.1| putative oxidoreductase molybdopterin binding [Bradyrhizobium sp. ORS 278] emb|CAL74304.1| putative oxidoreductase molybdopterin binding [Bradyrhizobium sp. ORS 278] Length = 260 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 222/257 (86%), Positives = 240/257 (93%) Query: 5 RKLLIPGVDKKLLVRDAVKTMPELTRRRFITAGTSLGALTLLTGCDVVDSSSAEEMLKHV 64 R LIPGVDK+LL++D++K MP+LTRRRFIT G SLGALTLLTGCDVVD +AEE+LK V Sbjct: 4 RPFLIPGVDKRLLIKDSIKAMPDLTRRRFITGGASLGALTLLTGCDVVDGDTAEELLKKV 63 Query: 65 SKFNDAVQAWMFNPDALAPTFPESMITKPFPFNAYYDLDDAPEIAGADWKLEVRGLVENK 124 SKFNDAVQ+W+FNPDALAPTFPES ITKPFPFNAYY LD+APEI ADWKLEVRGLV+NK Sbjct: 64 SKFNDAVQSWIFNPDALAPTFPESAITKPFPFNAYYTLDEAPEIDAADWKLEVRGLVDNK 123 Query: 125 KSWTLDELYKLPQVKQVTRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFQCADK 184 KSWTLDEL+ LPQVKQ+TRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWF CAD Sbjct: 124 KSWTLDELHALPQVKQITRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFNCADS 183 Query: 185 DGYNSPLDMRSALHPQTQMTFKFADEILPRAYGFPMKIRVPTKLGFKNPKYVLSMEVTND 244 GYNSPLDMR+ALHPQTQMTFKF D+ILPRAYGFPMKIRVPTKLGFKNPKYV++MEVTND Sbjct: 184 QGYNSPLDMRTALHPQTQMTFKFDDQILPRAYGFPMKIRVPTKLGFKNPKYVVAMEVTND 243 Query: 245 YKGGYWEDQGYNSFSGS 261 YKGGYWEDQGYNSFSGS Sbjct: 244 YKGGYWEDQGYNSFSGS 260 >ref|ZP_08627990.1| sulfite oxidase-like protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09285.1| sulfite oxidase-like protein [Bradyrhizobiaceae bacterium SG-6C] Length = 261 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 221/261 (84%), Positives = 237/261 (90%) Query: 1 MGRLRKLLIPGVDKKLLVRDAVKTMPELTRRRFITAGTSLGALTLLTGCDVVDSSSAEEM 60 MGR+RKLLIPGVDK LLV+DA+K MP+L+RRRFI G SLGALTLLTGCDV DS SAE M Sbjct: 1 MGRMRKLLIPGVDKNLLVKDALKVMPDLSRRRFIAGGASLGALTLLTGCDVTDSFSAESM 60 Query: 61 LKHVSKFNDAVQAWMFNPDALAPTFPESMITKPFPFNAYYDLDDAPEIAGADWKLEVRGL 120 L +SKFNDAVQA +FNPD LAPTFPES IT+PFPFNAYY LDDAP I G DWKLEVRGL Sbjct: 61 LTQISKFNDAVQAKLFNPDTLAPTFPESAITRPFPFNAYYALDDAPTIDGKDWKLEVRGL 120 Query: 121 VENKKSWTLDELYKLPQVKQVTRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFQ 180 VENKKSWTLDELY+LPQ KQ+TRHICVEGWSAIGSWTGTPLR FL+L+GAD RAKYVWF Sbjct: 121 VENKKSWTLDELYQLPQEKQITRHICVEGWSAIGSWTGTPLRHFLRLIGADMRAKYVWFN 180 Query: 181 CADKDGYNSPLDMRSALHPQTQMTFKFADEILPRAYGFPMKIRVPTKLGFKNPKYVLSME 240 CAD DGYNSPLDM +ALHPQTQMTFKF DEILPRAYG+PMKIRVPTKLGFKNPKYV+S+E Sbjct: 181 CADMDGYNSPLDMPTALHPQTQMTFKFGDEILPRAYGYPMKIRVPTKLGFKNPKYVVSLE 240 Query: 241 VTNDYKGGYWEDQGYNSFSGS 261 VTNDYKGGYWEDQGYNSFSGS Sbjct: 241 VTNDYKGGYWEDQGYNSFSGS 261 >ref|ZP_07026301.1| oxidoreductase molybdopterin binding [Afipia sp. 1NLS2] gb|EFI53443.1| oxidoreductase molybdopterin binding [Afipia sp. 1NLS2] Length = 262 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 211/257 (82%), Positives = 230/257 (89%) Query: 5 RKLLIPGVDKKLLVRDAVKTMPELTRRRFITAGTSLGALTLLTGCDVVDSSSAEEMLKHV 64 R LIPGVD++LL++DAV+ MP+LTRRRFIT G SLGALTLLTGCDV DS+SAE +L + Sbjct: 6 RTKLIPGVDRQLLIKDAVRQMPDLTRRRFITGGASLGALTLLTGCDVSDSASAETLLAKI 65 Query: 65 SKFNDAVQAWMFNPDALAPTFPESMITKPFPFNAYYDLDDAPEIAGADWKLEVRGLVENK 124 SKFNDAVQA +FNP+ LAPTF ES IT+PFPFNAYY LDDAP I DWKLEVRGLVENK Sbjct: 66 SKFNDAVQAAIFNPNTLAPTFAESAITRPFPFNAYYGLDDAPNIDAKDWKLEVRGLVENK 125 Query: 125 KSWTLDELYKLPQVKQVTRHICVEGWSAIGSWTGTPLRDFLKLVGADTRAKYVWFQCADK 184 K WTL+ELY+LPQ KQ+TRH+CVEGWSAIGSWTGTPLR FLKLVGADTRAKY WFQCAD Sbjct: 126 KPWTLEELYQLPQEKQITRHVCVEGWSAIGSWTGTPLRHFLKLVGADTRAKYCWFQCADM 185 Query: 185 DGYNSPLDMRSALHPQTQMTFKFADEILPRAYGFPMKIRVPTKLGFKNPKYVLSMEVTND 244 DGYNSPLDM +ALHPQT M FKF D+ILPRAYGFPMKIRVPTKLGFKNPKYV+SMEVTND Sbjct: 186 DGYNSPLDMETALHPQTIMAFKFDDKILPRAYGFPMKIRVPTKLGFKNPKYVVSMEVTND 245 Query: 245 YKGGYWEDQGYNSFSGS 261 YKGGYWEDQGYNSFSGS Sbjct: 246 YKGGYWEDQGYNSFSGS 262