BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0250.0015.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772587.1| hypothetical protein blr5947 [Bradyrhizobium ja... 363 1e-98 ref|YP_001207146.1| hypothetical protein BRADO5241 [Bradyrhizobi... 321 5e-86 ref|YP_783112.1| peptidase C14, caspase catalytic subunit p20 [R... 283 1e-74 ref|ZP_05115171.1| caspase domain protein [Labrenzia alexandrii ... 188 4e-46 ref|YP_004303702.1| Caspase domain protein [Polymorphum gilvum S... 187 8e-46 >ref|NP_772587.1| hypothetical protein blr5947 [Bradyrhizobium japonicum USDA 110] dbj|BAC51212.1| blr5947 [Bradyrhizobium japonicum USDA 110] Length = 572 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 178/233 (76%), Positives = 197/233 (84%), Gaps = 16/233 (6%) Query: 1 VIGNGAYAHVKALPNPPNDARAIAKSLRDIGFTVSEGLDLDRNTMQKTINEFLRDAARSQ 60 +IGNGAYAHVKALPNPPNDARA+AKSLRDIGFTVSEG+DLDR MQK +FLRDAAR+Q Sbjct: 340 IIGNGAYAHVKALPNPPNDARAVAKSLRDIGFTVSEGVDLDRAAMQKMTRDFLRDAARAQ 399 Query: 61 IAVVYYAGHGVQVDGRNYLVPVDIAFRAGGRMTDAMVDMDVIMAGLDDQIRTNILILDAC 120 +AVVYYAGHGVQVDGRNYL+PVD+ + G MT+AM+DMD IMAGLDDQ+RTNILI DAC Sbjct: 400 VAVVYYAGHGVQVDGRNYLIPVDVELKPGTAMTEAMIDMDTIMAGLDDQVRTNILIFDAC 459 Query: 121 RNNPMAPQVASAGPSRGIEAGSGLAAPASLGSGSTLGAGTLIAFATAPGQVALDGEGANS 180 RNNPMA QVASA +RGIE SGLAAP SLG+G+TLGAGTLIAFATAPGQVALDG+GANS Sbjct: 460 RNNPMAQQVASAAANRGIEGASGLAAPTSLGAGATLGAGTLIAFATAPGQVALDGDGANS 519 Query: 181 PFSAALS----------------IRAEVVAATKGKQVPWSNSSLLGEVYLAEQ 217 PFSAALS +RAEVV+ TK KQVPWSNSSLLGEVYLAE+ Sbjct: 520 PFSAALSRHIGTLGLEVQQMLTRVRAEVVSTTKNKQVPWSNSSLLGEVYLAEK 572 >ref|YP_001207146.1| hypothetical protein BRADO5241 [Bradyrhizobium sp. ORS 278] emb|CAL78929.1| conserved hypothetical protein with a TPR motif and a caspase domain; putative exported protein [Bradyrhizobium sp. ORS 278] Length = 556 Score = 321 bits (822), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 164/232 (70%), Positives = 185/232 (79%), Gaps = 18/232 (7%) Query: 1 VIGNGAYAHVKALPNPPNDARAIAKSLRDIGFTVSEGLDLDRNTMQKTINEFLRDAARSQ 60 VIGNGAYAHV+ALPNPP DARAIAKSLRDIGF+V EG+DLDR MQ +FLR+AAR+Q Sbjct: 324 VIGNGAYAHVQALPNPPRDARAIAKSLRDIGFSVVEGIDLDRAAMQARTRDFLREAARAQ 383 Query: 61 IAVVYYAGHGVQVDGRNYLVPVDIAFRAGGRMTDAMVDMDVIMAGLDDQIRTNILILDAC 120 +AVV+YAGHGVQ+DGRNYL+P DIA G + AMVDMD I+AGLDDQ+RTNILILDAC Sbjct: 384 VAVVFYAGHGVQIDGRNYLLPTDIALSNGSDVVSAMVDMDQILAGLDDQVRTNILILDAC 443 Query: 121 RNNPMAPQVASA-GPSRGIEAGSGLAAPASLGSGSTLGAGTLIAFATAPGQVALDGEGAN 179 RNNP AP S PSRG+ A +GLAAP+SLG+G+T GAGTLIAFATAPG+ ALDG+G N Sbjct: 444 RNNPFAPPEGSGPAPSRGLSA-TGLAAPSSLGTGATSGAGTLIAFATAPGKAALDGDGEN 502 Query: 180 SPFSAALS----------------IRAEVVAATKGKQVPWSNSSLLGEVYLA 215 SPFSAALS +RAEVVA TK KQVPWSNSSLLGEVYLA Sbjct: 503 SPFSAALSRHIGTPGLEVQQMLTRVRAEVVAGTKNKQVPWSNSSLLGEVYLA 554 >ref|YP_783112.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas palustris BisA53] gb|ABJ08132.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas palustris BisA53] Length = 569 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 143/230 (62%), Positives = 172/230 (74%), Gaps = 16/230 (6%) Query: 1 VIGNGAYAHVKALPNPPNDARAIAKSLRDIGFTVSEGLDLDRNTMQKTINEFLRDAARSQ 60 VIGNG Y VK LPN DAR IA LR +GF V EG+DLD ++MQ +FLR AAR+ Sbjct: 337 VIGNGGYRLVKPLPNAVADAREIAGHLRALGFEVVEGIDLDHDSMQAMTRDFLRQAARAP 396 Query: 61 IAVVYYAGHGVQVDGRNYLVPVDIAFRAGGRMTDAMVDMDVIMAGLDDQIRTNILILDAC 120 +A++YYAGHG+Q+DGRN+LVPVD + M+DMD I+AGLDDQ+RTNILI DAC Sbjct: 397 LALMYYAGHGIQIDGRNFLVPVDQELSSTANPLQTMIDMDSILAGLDDQLRTNILIFDAC 456 Query: 121 RNNPMAPQVASAGPSRGIEAGSGLAAPASLGSGSTLGAGTLIAFATAPGQVALDGEGANS 180 RNNP++ ++ASA PSR I+ SGLAAP + GSG+ LGAGTLIAFATAPGQVALDGEGA+S Sbjct: 457 RNNPLSQRLASAEPSRSIQGESGLAAPVTPGSGAMLGAGTLIAFATAPGQVALDGEGAHS 516 Query: 181 PFSAALS----------------IRAEVVAATKGKQVPWSNSSLLGEVYL 214 PF+AAL+ +RAEVVAAT+ +QVPWSNSSLLGEVYL Sbjct: 517 PFAAALARHIGTPGLEVQQMLTRVRAEVVAATRSRQVPWSNSSLLGEVYL 566 >ref|ZP_05115171.1| caspase domain protein [Labrenzia alexandrii DFL-11] gb|EEE45770.1| caspase domain protein [Labrenzia alexandrii DFL-11] Length = 522 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 20/234 (8%) Query: 1 VIGNGAYAHVKALPNPPNDARAIAKSLRDIGFTVSEGLDLDRNTMQKTINEFLRDAARSQ 60 V+GNGAY H ALPNP NDA +A LR +GF V G+D + M++T+ EF + A + Sbjct: 29 VLGNGAYEHTVALPNPANDAEVMAGKLRGLGFDVVSGMDQTYSDMRRTVMEFAKKAYGAD 88 Query: 61 IAVVYYAGHGVQVDGRNYLVPVDIAFRAGGRMTDAMVDMDVIMAGLDDQIRTNILILDAC 120 IAV++YAGHG+Q+ G+N L+PVD + + +D IM + ++ ++ LDAC Sbjct: 89 IAVLFYAGHGMQIAGQNLLIPVDARIEDETSIDFETISVDFIMRQMSKDVKVQMVFLDAC 148 Query: 121 RNNPMAPQVA-SAGPSRGIEAGSGLAAPASLGSGSTLGAGTLIAFATAPGQVALDGEGAN 179 R+NP+A +A GPSR G+GL A + T G G++IAF+T+PG VALDGEG+N Sbjct: 149 RDNPLARTLARRMGPSRSGSVGTGL---AEIKVQETGGEGSVIAFSTSPGDVALDGEGSN 205 Query: 180 SPFSAAL----------------SIRAEVVAATKGKQVPWSNSSLLGEVYLAEQ 217 SPF++AL + +V AT+ +Q PW N+SL+GEV+L +Q Sbjct: 206 SPFTSALIRHIDTPNASIQTVMTRVTGDVYDATEKRQRPWVNASLIGEVFLNKQ 259 >ref|YP_004303702.1| Caspase domain protein [Polymorphum gilvum SL003B-26A1] gb|ADZ70400.1| Caspase domain protein [Polymorphum gilvum SL003B-26A1] Length = 511 Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 98/231 (42%), Positives = 139/231 (60%), Gaps = 20/231 (8%) Query: 1 VIGNGAYAHVKALPNPPNDARAIAKSLRDIGFTVSEGLDLDRNTMQKTINEFLRDAARSQ 60 V+GN AY + LPNP NDARA+ LRD+GF V G DLD M++T+ +F ++A + Sbjct: 20 VMGNSAYENAVQLPNPANDARAMTTKLRDLGFEVVSGYDLDYTAMRRTVAQFAKEARGAD 79 Query: 61 IAVVYYAGHGVQVDGRNYLVPVDIAFRAGGRMTDAMVDMDVIMAGLDDQIRTNILILDAC 120 +A+ +YAGHG+QV G+NYL+PVD F + + D I+ + + ++ ++ LDAC Sbjct: 80 VALFFYAGHGMQVQGQNYLIPVDARFSDETALDFETISADFILRQMSNNVKVRMVFLDAC 139 Query: 121 RNNPMAPQVA-SAGPSRGIEAGSGLAAPASLGSGSTLGAGTLIAFATAPGQVALDGEGAN 179 R+NP+A +A S P+R G GL A + T G G++IAFAT+PG VALDGEG+N Sbjct: 140 RDNPLARTLARSMSPTRSAAIGVGL---AEIKIEETGGEGSVIAFATSPGDVALDGEGSN 196 Query: 180 SPFSAAL----------------SIRAEVVAATKGKQVPWSNSSLLGEVYL 214 SPF+ AL + +V T +Q PW N+SL+GEVYL Sbjct: 197 SPFTTALLRHIDAPDTPIQNVMTRVTGDVYRETGQRQRPWVNASLIGEVYL 247