BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0250.0008.p         (178 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_485201.1| inner-membrane translocator [Rhodopseudomonas p...   294   4e-78
ref|YP_001993527.1| inner-membrane translocator [Rhodopseudomona...   294   4e-78
ref|YP_004110572.1| inner-membrane translocator [Rhodopseudomona...   294   4e-78
ref|NP_949364.1| ABC transporter permease [Rhodopseudomonas palu...   294   4e-78
ref|YP_568725.1| inner-membrane translocator [Rhodopseudomonas p...   291   3e-77

>ref|YP_485201.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gb|ABD06290.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 288

 Score =  294 bits (753), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 148/162 (91%), Positives = 154/162 (95%)

Query: 17  EGQIDLFGVGIGRYRLMIVVICGLLTLALQLILVKTRFGSRLRAAVDDPRAAIGLGINVP 76
           +GQIDLFG+GIGRYRLMI+VICGLLT+ALQL L KTRFGSRLRAAVDDPR A GLGINVP
Sbjct: 127 QGQIDLFGIGIGRYRLMIIVICGLLTVALQLTLAKTRFGSRLRAAVDDPRVAAGLGINVP 186

Query: 77  QVFAFTFAFGCGLAGLGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 136
           QVFA TFAFGCGLAG GGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL
Sbjct: 187 QVFALTFAFGCGLAGFGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 246

Query: 137 LGIADVAGKYYVPKLGPFVIYTVMIVILLWRPNGLFGRTAAR 178
           LGI DVAGKYY PKLGPFVIYT+MIVIL+WRPNGLFGRTAAR
Sbjct: 247 LGIGDVAGKYYFPKLGPFVIYTIMIVILIWRPNGLFGRTAAR 288


>ref|YP_001993527.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gb|ACF03052.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score =  294 bits (752), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 148/162 (91%), Positives = 154/162 (95%)

Query: 17  EGQIDLFGVGIGRYRLMIVVICGLLTLALQLILVKTRFGSRLRAAVDDPRAAIGLGINVP 76
           +GQIDLFGVGIGRYRLMI+VICGLLT+ LQL L KTRFGSRLRAAVDDPR A GLGINVP
Sbjct: 127 QGQIDLFGVGIGRYRLMIIVICGLLTIGLQLTLAKTRFGSRLRAAVDDPRVASGLGINVP 186

Query: 77  QVFAFTFAFGCGLAGLGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 136
           QVFA TFAFGCGLAG GGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL
Sbjct: 187 QVFALTFAFGCGLAGFGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 246

Query: 137 LGIADVAGKYYVPKLGPFVIYTVMIVILLWRPNGLFGRTAAR 178
           LGI DVAGKYY+PKLGPFVIYT+MIVIL+WRPNGLFGRTAAR
Sbjct: 247 LGIGDVAGKYYLPKLGPFVIYTIMIVILIWRPNGLFGRTAAR 288


>ref|YP_004110572.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gb|ADU45839.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score =  294 bits (752), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 148/162 (91%), Positives = 154/162 (95%)

Query: 17  EGQIDLFGVGIGRYRLMIVVICGLLTLALQLILVKTRFGSRLRAAVDDPRAAIGLGINVP 76
           +GQIDLFGVGIGRYRLMI+VICGLLT+ LQL L KTRFGSRLRAAVDDPR A GLGINVP
Sbjct: 127 QGQIDLFGVGIGRYRLMIIVICGLLTVGLQLTLAKTRFGSRLRAAVDDPRVASGLGINVP 186

Query: 77  QVFAFTFAFGCGLAGLGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 136
           QVFA TFAFGCGLAG GGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL
Sbjct: 187 QVFALTFAFGCGLAGFGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 246

Query: 137 LGIADVAGKYYVPKLGPFVIYTVMIVILLWRPNGLFGRTAAR 178
           LGI DVAGKYY+PKLGPFVIYT+MIVIL+WRPNGLFGRTAAR
Sbjct: 247 LGIGDVAGKYYLPKLGPFVIYTIMIVILIWRPNGLFGRTAAR 288


>ref|NP_949364.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 emb|CAE29469.1| possible ABC transport system permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 288

 Score =  294 bits (752), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 148/162 (91%), Positives = 154/162 (95%)

Query: 17  EGQIDLFGVGIGRYRLMIVVICGLLTLALQLILVKTRFGSRLRAAVDDPRAAIGLGINVP 76
           +GQIDLFGVGIGRYRLMI+VICGLLT+ LQL L KTRFGSRLRAAVDDPR A GLGINVP
Sbjct: 127 QGQIDLFGVGIGRYRLMIIVICGLLTIGLQLTLAKTRFGSRLRAAVDDPRVASGLGINVP 186

Query: 77  QVFAFTFAFGCGLAGLGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 136
           QVFA TFAFGCGLAG GGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL
Sbjct: 187 QVFALTFAFGCGLAGFGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 246

Query: 137 LGIADVAGKYYVPKLGPFVIYTVMIVILLWRPNGLFGRTAAR 178
           LGI DVAGKYY+PKLGPFVIYT+MIVIL+WRPNGLFGRTAAR
Sbjct: 247 LGIGDVAGKYYLPKLGPFVIYTIMIVILIWRPNGLFGRTAAR 288


>ref|YP_568725.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gb|ABE38824.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 288

 Score =  291 bits (745), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/162 (90%), Positives = 154/162 (95%)

Query: 17  EGQIDLFGVGIGRYRLMIVVICGLLTLALQLILVKTRFGSRLRAAVDDPRAAIGLGINVP 76
           +GQIDLFGVGIGRYRLMI+VICGLLT+ALQL L KTRFGSRLRAAVDDPR A GLGINVP
Sbjct: 127 QGQIDLFGVGIGRYRLMIIVICGLLTVALQLTLAKTRFGSRLRAAVDDPRVASGLGINVP 186

Query: 77  QVFAFTFAFGCGLAGLGGALSAEILGLDPYFPLKFMIYFLIVVTVGGSSSITGPFLASLL 136
           QVFA TFAFGCGLAG GGALSAEILGLDP+FPLKFMIYFLIVVTVGGSSSITGPFLASLL
Sbjct: 187 QVFALTFAFGCGLAGFGGALSAEILGLDPHFPLKFMIYFLIVVTVGGSSSITGPFLASLL 246

Query: 137 LGIADVAGKYYVPKLGPFVIYTVMIVILLWRPNGLFGRTAAR 178
           LGI DVAGKYY+PKLGPF+IYT+MIVIL+WRPNGLFGRTA R
Sbjct: 247 LGIGDVAGKYYLPKLGPFMIYTIMIVILIWRPNGLFGRTATR 288