BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0250.0001.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001243591.1| hypothetical protein BBta_7860 [Bradyrhizobi... 367 1e-99 ref|YP_001208925.1| hypothetical protein BRADO7128 [Bradyrhizobi... 367 2e-99 ref|NP_767485.1| hypothetical protein blr0845 [Bradyrhizobium ja... 362 6e-98 ref|YP_001207723.1| hypothetical protein BRADO5842 [Bradyrhizobi... 348 1e-93 ref|NP_774426.1| hypothetical protein blr7786 [Bradyrhizobium ja... 344 1e-92 >ref|YP_001243591.1| hypothetical protein BBta_7860 [Bradyrhizobium sp. BTAi1] gb|ABQ39685.1| putative exported protein of unknown function with UPF0065 (bug) family domain [Bradyrhizobium sp. BTAi1] Length = 324 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 174/323 (53%), Positives = 232/323 (71%) Query: 19 VLRRQFLQLAAATAALPLTFGKANAEAYPARPVRLVIGYTPGGSADLTARLMGQWLSEKL 78 + RR+ L L A+ A+A YPARPVR V+GY PGG+ D+ ARL+GQ LSE L Sbjct: 2 ISRRRALGLLASAVPSVAAVRFASAAEYPARPVRFVVGYPPGGATDILARLIGQRLSETL 61 Query: 79 GQSFIVENRPGGGTNIATEQALRAAPDGYTLLLVAPANAINATLYQKLPFDFMREMEPIA 138 GQ F+VEN+PG G NI TE + AA DGYT+LLV PAN INA+LY L F+F+R++ P+A Sbjct: 62 GQQFVVENKPGAGNNIGTESVVNAAADGYTVLLVNPANYINASLYTNLKFNFVRDIAPVA 121 Query: 139 GIIRFPNVVVVHPSLPIKSIPELIAYAKANPGKLNMASSGNGSTIHMSGELFKMLTGINM 198 R PNV+ V+ + K++ E IAY K NPGK+NMASSGNG+++H+SGE+F +TG M Sbjct: 122 SFNRVPNVMTVNNDIKAKTVAEFIAYLKENPGKVNMASSGNGTSVHLSGEMFMAMTGTKM 181 Query: 199 QHVPYRGGAPALTDMLSGVMQVMFDNLPTCAEHVKSGKLRGLAVTSTTRSDVLPDLPPVA 258 QHVPYRG APA+TDML G +QV+FDN+P+ +H++SG LR L VT+ RS LPD+ +A Sbjct: 182 QHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAIA 241 Query: 259 DFLPGYEASAWYGLAAPKNTPPEIVDRLNKAVNEILADPKAKTRFTEIGAIMLPGSAVDF 318 + +PGYEASA +G+ APKNTP EI+++LNK VN +LA+P+ K + ++G L S F Sbjct: 242 ETVPGYEASALFGMGAPKNTPKEIIEKLNKQVNVVLAEPEIKKKLVDLGGEPLIQSPDQF 301 Query: 319 GRLVADETEKWGKVVKFAGAKVD 341 G + ET+KW KVV+FAG K+D Sbjct: 302 GAQIVAETDKWKKVVEFAGLKLD 324 >ref|YP_001208925.1| hypothetical protein BRADO7128 [Bradyrhizobium sp. ORS 278] emb|CAL80710.1| conserved hypothetical protein; putative signal peptide; putative UPF0065 (bug) family protein [Bradyrhizobium sp. ORS 278] Length = 324 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 173/323 (53%), Positives = 229/323 (70%) Query: 19 VLRRQFLQLAAATAALPLTFGKANAEAYPARPVRLVIGYTPGGSADLTARLMGQWLSEKL 78 + RR L L A +A+A YP+RPVR V+GY PGG+ D+ ARL+GQ LSE Sbjct: 2 ISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSETF 61 Query: 79 GQSFIVENRPGGGTNIATEQALRAAPDGYTLLLVAPANAINATLYQKLPFDFMREMEPIA 138 GQ F+VEN+PG G NI TE + A PDGYT+LLV PAN IN +LY L F+F+R++ P+A Sbjct: 62 GQQFVVENKPGAGNNIGTETVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPVA 121 Query: 139 GIIRFPNVVVVHPSLPIKSIPELIAYAKANPGKLNMASSGNGSTIHMSGELFKMLTGINM 198 R PNV+ V+ + K++ E IAY K NPGK+NMASSGNG+++H+SGE+F +TG M Sbjct: 122 SFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASSGNGTSVHLSGEMFMAMTGTKM 181 Query: 199 QHVPYRGGAPALTDMLSGVMQVMFDNLPTCAEHVKSGKLRGLAVTSTTRSDVLPDLPPVA 258 QHVPYRG APA+TDML G +QV+FDN+P+ +H++SG LR L VT+ RS LPD+ +A Sbjct: 182 QHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAIA 241 Query: 259 DFLPGYEASAWYGLAAPKNTPPEIVDRLNKAVNEILADPKAKTRFTEIGAIMLPGSAVDF 318 + +PGYEASA +G+ APKNTP EIV++LNK VN +LA+P+ R ++G L S F Sbjct: 242 ETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQF 301 Query: 319 GRLVADETEKWGKVVKFAGAKVD 341 G +A ET+KW KVV+FAG K+D Sbjct: 302 GAQIAAETDKWKKVVEFAGLKLD 324 >ref|NP_767485.1| hypothetical protein blr0845 [Bradyrhizobium japonicum USDA 110] dbj|BAC46110.1| blr0844 [Bradyrhizobium japonicum USDA 110] Length = 324 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 175/325 (53%), Positives = 231/325 (71%), Gaps = 4/325 (1%) Query: 19 VLRRQFLQLAAAT--AALPLTFGKANAEAYPARPVRLVIGYTPGGSADLTARLMGQWLSE 76 + RR L L AAT AA PL+ KA A YPARPV+ V+GY PGG+ D+ ARL+GQ LSE Sbjct: 2 ITRRTALGLLAATPLAASPLS--KALAADYPARPVKWVVGYPPGGATDILARLIGQRLSE 59 Query: 77 KLGQSFIVENRPGGGTNIATEQALRAAPDGYTLLLVAPANAINATLYQKLPFDFMREMEP 136 KLGQ F++EN+PG G NIATE + A PDGYTL LV PAN INA+LY L F+F+R++ P Sbjct: 60 KLGQQFVIENKPGAGNNIATESVINAEPDGYTLQLVNPANYINASLYTNLKFNFVRDIAP 119 Query: 137 IAGIIRFPNVVVVHPSLPIKSIPELIAYAKANPGKLNMASSGNGSTIHMSGELFKMLTGI 196 +A R PNV+ V+ +P K++ E I Y KANPGK+NMASSGNG+++H+SGE+F +TG Sbjct: 120 VASFQRVPNVMTVNKDVPAKTVAEFIEYVKANPGKVNMASSGNGTSVHLSGEMFMAMTGC 179 Query: 197 NMQHVPYRGGAPALTDMLSGVMQVMFDNLPTCAEHVKSGKLRGLAVTSTTRSDVLPDLPP 256 MQHVPYRG APA+TDML G +QV+FDN+P+ +H++SG LR + VT+ RS LPD+P Sbjct: 180 KMQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRAIGVTTAQRSPQLPDVPA 239 Query: 257 VADFLPGYEASAWYGLAAPKNTPPEIVDRLNKAVNEILADPKAKTRFTEIGAIMLPGSAV 316 + + + YEASA +G+ APKNTP EI+ +LN +N ++ +P R E+G + Sbjct: 240 IGETVKDYEASALFGMGAPKNTPKEIIAKLNDEINTLMKEPDMTKRLVELGGEPRVQTPE 299 Query: 317 DFGRLVADETEKWGKVVKFAGAKVD 341 FG + ETEKW KVV+FAG KV+ Sbjct: 300 AFGEEIKAETEKWKKVVEFAGLKVE 324 >ref|YP_001207723.1| hypothetical protein BRADO5842 [Bradyrhizobium sp. ORS 278] emb|CAL79506.1| conserved hypothetical protein; putative signal peptide; putative UPF0065 (bug) family [Bradyrhizobium sp. ORS 278] Length = 326 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 162/297 (54%), Positives = 215/297 (72%) Query: 45 AYPARPVRLVIGYTPGGSADLTARLMGQWLSEKLGQSFIVENRPGGGTNIATEQALRAAP 104 AYP RP+R ++G+ PGG D+ AR+M QWLSE+LGQ +VENR G G NIA + +AP Sbjct: 30 AYPDRPIRWLVGFAPGGPVDIVARIMAQWLSERLGQQVVVENRTGSGGNIAAAAMINSAP 89 Query: 105 DGYTLLLVAPANAINATLYQKLPFDFMREMEPIAGIIRFPNVVVVHPSLPIKSIPELIAY 164 DGYTLL VAP NAI+ +LY+KLP+DF+R+ P+A I++ N++VV LP K++ E I Y Sbjct: 90 DGYTLLFVAPNNAISTSLYKKLPYDFIRDTVPVASIMQLTNMLVVSNDLPAKTVKEFIDY 149 Query: 165 AKANPGKLNMASSGNGSTIHMSGELFKMLTGINMQHVPYRGGAPALTDMLSGVMQVMFDN 224 +ANPGK+ ASSGNG+++HM+ ELFK +T +M HVPYRG A A D++S +Q++FDN Sbjct: 150 CQANPGKIAFASSGNGTSVHMAAELFKAMTKCDMLHVPYRGSALAFPDIISNKVQLIFDN 209 Query: 225 LPTCAEHVKSGKLRGLAVTSTTRSDVLPDLPPVADFLPGYEASAWYGLAAPKNTPPEIVD 284 LPT E + G +R L VTS R +P++PP+A+ +PGYE+ +YG++APK TPPEIV+ Sbjct: 210 LPTALEQSRGGSVRALGVTSPQRWPTVPEVPPIAETVPGYESVGFYGISAPKGTPPEIVE 269 Query: 285 RLNKAVNEILADPKAKTRFTEIGAIMLPGSAVDFGRLVADETEKWGKVVKFAGAKVD 341 LNKAV E L DPK R TE G I + +FG+LVADETEKW KVV+FAG VD Sbjct: 270 LLNKAVGEALKDPKLVARLTETGGIPRAMTPAEFGKLVADETEKWRKVVEFAGVSVD 326 >ref|NP_774426.1| hypothetical protein blr7786 [Bradyrhizobium japonicum USDA 110] dbj|BAC53051.1| blr7786 [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 159/295 (53%), Positives = 224/295 (75%) Query: 45 AYPARPVRLVIGYTPGGSADLTARLMGQWLSEKLGQSFIVENRPGGGTNIATEQALRAAP 104 +YP+R V+ V+ Y PGG+ D+ +RL+ Q LSE+LGQ+F+VEN+PG G+NI T+ + +AP Sbjct: 30 SYPSRSVKWVVPYAPGGATDVLSRLLCQRLSERLGQTFVVENKPGAGSNIGTQAVITSAP 89 Query: 105 DGYTLLLVAPANAINATLYQKLPFDFMREMEPIAGIIRFPNVVVVHPSLPIKSIPELIAY 164 DGYTLLL + ANAINA+ LP+DF + + PIAG+ R P V+VV+ LP+K++ + IAY Sbjct: 90 DGYTLLLTSTANAINASFDPSLPYDFAKSIAPIAGVARIPLVLVVNNDLPVKTVADFIAY 149 Query: 165 AKANPGKLNMASSGNGSTIHMSGELFKMLTGINMQHVPYRGGAPALTDMLSGVMQVMFDN 224 AKANPGK+++ASSG G+++H+SGELFK L G+ HVPYRG AP LTD++SG +Q MFDN Sbjct: 150 AKANPGKMSIASSGIGTSLHLSGELFKSLAGVRFTHVPYRGSAPGLTDVMSGQIQGMFDN 209 Query: 225 LPTCAEHVKSGKLRGLAVTSTTRSDVLPDLPPVADFLPGYEASAWYGLAAPKNTPPEIVD 284 + + E V++GKLR L VT+ RS++LPD PP+A+ LPGYE S++YG+ AP +TP EIVD Sbjct: 210 VTSSFELVRAGKLRALGVTTRERSEILPDAPPIAETLPGYETSSFYGVGAPHDTPREIVD 269 Query: 285 RLNKAVNEILADPKAKTRFTEIGAIMLPGSAVDFGRLVADETEKWGKVVKFAGAK 339 LN+ ++ L+D + K R E+GAI L G+A +FG ++ ETE+W KVV+ +G K Sbjct: 270 LLNREIDTALSDAEIKVRIAELGAIPLHGNAGEFGGMLTAETERWRKVVELSGIK 324