BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0041.p (1100 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08629337.1| biotin carboxylase [Bradyrhizobiaceae bacteri... 1815 0.0 ref|YP_483850.1| pyruvate carboxylase [Rhodopseudomonas palustri... 1767 0.0 ref|YP_567741.1| carbamoyl-phosphate synthase L chain, ATP-bindi... 1766 0.0 ref|NP_946800.1| putative pyruvate carboxylase [Rhodopseudomonas... 1764 0.0 ref|YP_001990640.1| carbamoyl-phosphate synthase L chain ATP-bin... 1747 0.0 >ref|ZP_08629337.1| biotin carboxylase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07830.1| biotin carboxylase [Bradyrhizobiaceae bacterium SG-6C] Length = 1106 Score = 1815 bits (4701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 915/1106 (82%), Positives = 991/1106 (89%), Gaps = 6/1106 (0%) Query: 1 MSFKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAY 60 MSF+ LLIANRGEIAIRIARAAAD+GIATVAI+PADDA SLHVR+AD + EIPGRGARAY Sbjct: 1 MSFRKLLIANRGEIAIRIARAAADAGIATVAIYPADDALSLHVRAADKACEIPGRGARAY 60 Query: 61 LDIEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAK 120 LDI +V+AAAK++GCDALHPGYGFLSEN LARRCAEE I FVGPSP AL+LFGDK AK Sbjct: 61 LDIASVVAAAKSSGCDALHPGYGFLSENAVLARRCAEEGIVFVGPSPAALELFGDKVAAK 120 Query: 121 ALAKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDE 180 ALAK+C VP+I GT G T+LDEAKAFFA LG G AVM+KA+AGGGGRGMR VE A L+ Sbjct: 121 ALAKRCNVPVIEGTVGPTTLDEAKAFFASLGKGGAVMVKAMAGGGGRGMRAVEKAEDLEA 180 Query: 181 AYARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 AYARCQSEAKAAFGSD VYVERLIRKARH+EVQIIGDRHGAISHLWERECTIQRRNQKLI Sbjct: 181 AYARCQSEAKAAFGSDGVYVERLIRKARHIEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 Query: 241 EVAPSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEA-GESEGAFAFIEANPRL 299 EVAPSPSLS+ +RARI+EAA+QLA AA YD+LGTFEFLVD EA GE +GAFAFIEANPRL Sbjct: 241 EVAPSPSLSDSLRARIVEAARQLAGAANYDSLGTFEFLVDGEAAGEGDGAFAFIEANPRL 300 Query: 300 QVEHTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGV 359 QVEHTVTEEVLG+DLV+SQLAVA GATL SLGLAQS+VP PRG+AMQLR+NMEVMD G Sbjct: 301 QVEHTVTEEVLGVDLVKSQLAVAEGATLGSLGLAQSSVPSPRGFAMQLRINMEVMDASGA 360 Query: 360 TKPTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASR 419 TKPTGG L VF+ PSGPGVRVDTFGY+GY+TSAAFDSLLAKVIVH+PS +W DVV KA+R Sbjct: 361 TKPTGGVLGVFEPPSGPGVRVDTFGYAGYKTSAAFDSLLAKVIVHTPSGRWQDVVTKAAR 420 Query: 420 ALREFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEHAAPLLEVSE- 478 LREFRI GVATNIPF+ A+LA+ F N+ISTNF+DT+VAALV AA E +APL S Sbjct: 421 TLREFRIEGVATNIPFIQAMLANPDFIANEISTNFVDTNVAALVAAASEPSAPLFFASTG 480 Query: 479 ----AAAAKPATIEAAPEGSLPVPAPLQGTIVAIEVAEGDLVRPGQQIAVLESMKMEHLV 534 +AA + + AP GS+PV APLQGT+VAI VAEGD+V PGQQ+A++ESMKMEHLV Sbjct: 481 TDTGSAAVRNDSAGVAPAGSVPVAAPLQGTVVAIPVAEGDVVHPGQQLAIIESMKMEHLV 540 Query: 535 TAPHGGRVTRIAGGIGVTLMHGEPILFFEPAEVDGHHAAEEAAIDLDHIRPDLAELIARK 594 TA GG+VTRIA G TLM GEPIL+ EP E+D EEA IDLD+IRPDLAE++AR+ Sbjct: 541 TAQQGGKVTRIAVSDGTTLMQGEPILYIEPVEMDQQVVTEEAEIDLDYIRPDLAEMLARQ 600 Query: 595 AITLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNT 654 TLDENRP SV+RRRKTNQRTARENIAQLVDEGSF+EYGSLAIAAQRRRR V+DLIKNT Sbjct: 601 GNTLDENRPQSVDRRRKTNQRTARENIAQLVDEGSFMEYGSLAIAAQRRRRPVDDLIKNT 660 Query: 655 PADGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPL 714 PADGL++GVATVNA G D ARCMVISYDYTVLAGTQGHMNHKKIDRML LAEQWRMPL Sbjct: 661 PADGLVAGVATVNAAKVGEDNARCMVISYDYTVLAGTQGHMNHKKIDRMLTLAEQWRMPL 720 Query: 715 VFYAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDV 774 VFYAEGGGGRPGDTDRLGMTGLDGPSFVQFA+LSG VPVVGVVSGYCFAGNAAMLG CDV Sbjct: 721 VFYAEGGGGRPGDTDRLGMTGLDGPSFVQFARLSGHVPVVGVVSGYCFAGNAAMLGCCDV 780 Query: 775 IIATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYL 834 IIAT+NASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGV+DILV+DEEEATT AQKYL Sbjct: 781 IIATENASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVVDILVKDEEEATTAAQKYL 840 Query: 835 SYFQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAF 894 SYFQG + +WKAPDQRLLRRAIPENRLRVYDIR+VI+LIADE SVLEIRRDFGVGMITAF Sbjct: 841 SYFQGPIANWKAPDQRLLRRAIPENRLRVYDIRSVIELIADEDSVLEIRRDFGVGMITAF 900 Query: 895 IRIEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAE 954 IRIEGKPFGLIANNPKHLGGAIDA AGDKAARFMQLCDA+DIPIVSLCDTPGFMVGPEAE Sbjct: 901 IRIEGKPFGLIANNPKHLGGAIDANAGDKAARFMQLCDAYDIPIVSLCDTPGFMVGPEAE 960 Query: 955 KTAIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGM 1014 KTAIVRHVARMFVTGAS+TVPLFG+VLRKGYGLGAQSMIGGGFHASFFT AWPTGEFGGM Sbjct: 961 KTAIVRHVARMFVTGASMTVPLFGIVLRKGYGLGAQSMIGGGFHASFFTAAWPTGEFGGM 1020 Query: 1015 GLEGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRH 1074 GLEGYVRLGFRKEMEAI DP ERE Y++ KVAELYANGKAVSIASV EID VIDPA+TR Sbjct: 1021 GLEGYVRLGFRKEMEAIADPAERETYYKNKVAELYANGKAVSIASVFEIDNVIDPAETRT 1080 Query: 1075 WIMAGLRSVPKPEPRTHRKRPCIDAW 1100 WIMAGLRSVPKP PR HRKRPCID W Sbjct: 1081 WIMAGLRSVPKPAPREHRKRPCIDTW 1106 >ref|YP_483850.1| pyruvate carboxylase [Rhodopseudomonas palustris HaA2] gb|ABD04939.1| pyruvate carboxylase [Rhodopseudomonas palustris HaA2] Length = 1102 Score = 1767 bits (4577), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/1104 (81%), Positives = 980/1104 (88%), Gaps = 6/1104 (0%) Query: 1 MSFKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAY 60 M F+ LLIANRGEIAIRIARAAAD+G+ATVAIHPADDAASLHVR AD + EIPGRGARAY Sbjct: 1 MPFRKLLIANRGEIAIRIARAAADAGLATVAIHPADDAASLHVRIADEAREIPGRGARAY 60 Query: 61 LDIEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAK 120 LDIE VIAAAKA CDALHPGYGFLSEN LARRCAEE I F+GPSPEAL LFGDK AK Sbjct: 61 LDIEGVIAAAKAAHCDALHPGYGFLSENPDLARRCAEEGIRFIGPSPEALRLFGDKVAAK 120 Query: 121 ALAKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDE 180 LAKK GVPII GT G ++LDE KAFF LG AAVMIKA+AGGGGRGMR+VE A LDE Sbjct: 121 ELAKKSGVPIIDGTQGPSTLDEVKAFFGSLGDHAAVMIKAMAGGGGRGMRVVERAEDLDE 180 Query: 181 AYARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 AYARCQSEAKAAFGSD VY ERLIR ARH+EVQIIGDRHG IS LWERECTIQRRNQKL+ Sbjct: 181 AYARCQSEAKAAFGSDGVYAERLIRNARHIEVQIIGDRHGGISQLWERECTIQRRNQKLV 240 Query: 241 EVAPSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQ 300 E+APSPSLS+ +R RI+EAAK LA AA YD+LGTFEFLVD EAGE +GAFAFIEANPRLQ Sbjct: 241 EIAPSPSLSDSLRGRILEAAKTLAGAANYDSLGTFEFLVDGEAGEGDGAFAFIEANPRLQ 300 Query: 301 VEHTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGVT 360 VEHTVTEEVL IDLVRSQ+AVA GATL SLGL Q+AVP PRG+AMQLR+NME MD G T Sbjct: 301 VEHTVTEEVLAIDLVRSQIAVAGGATLESLGLDQAAVPRPRGFAMQLRINMETMDASGAT 360 Query: 361 KPTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRA 420 PTGGTLS+F+ PSGPGVRVDTFGY+GYRTSAAFDSLLAKVIVH+PS +W DVV KA+R+ Sbjct: 361 HPTGGTLSIFEPPSGPGVRVDTFGYAGYRTSAAFDSLLAKVIVHTPS-QWPDVVAKAARS 419 Query: 421 LREFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEHAAPLLEV---- 476 LREFRI GVATNIPF+ AILAH F NK+ST+FID +VA LVGAA + AAPL+ + Sbjct: 420 LREFRIDGVATNIPFIQAILAHPDFKANKVSTSFIDRNVAELVGAADKLAAPLIALPGGD 479 Query: 477 SEAAAAKPATIEAAPEGSLPVPAPLQGTIVAIEVAEGDLVRPGQQIAVLESMKMEHLVTA 536 ++ AK A +EAAPEG++ + APLQGT+VAI VAEGD+VRPGQQ+AV+ESMKMEHLV A Sbjct: 480 AQHGGAK-AAVEAAPEGAVVIAAPLQGTVVAITVAEGDVVRPGQQLAVIESMKMEHLVAA 538 Query: 537 PHGGRVTRIAGGIGVTLMHGEPILFFEPAEVDGHHAAEEAAIDLDHIRPDLAELIARKAI 596 GGR+ RI GVTLM GE IL+ EP +V+G A +EA +DLDHIRPDLAE++AR+ Sbjct: 539 EQGGRIRRIVTADGVTLMQGEAILYLEPQDVEGDLAVKEAEVDLDHIRPDLAEMLARQGN 598 Query: 597 TLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPA 656 TLDENRP SV RRRKTNQRTARENIAQLVD+GSF+EYGSLAIA QRRRR ++DLIKNTPA Sbjct: 599 TLDENRPDSVARRRKTNQRTARENIAQLVDDGSFMEYGSLAIAGQRRRRALDDLIKNTPA 658 Query: 657 DGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVF 716 DGL++GVATVNA FG ARCMVI+YDYTVLAGTQGHMNHKKIDRML L EQW+MPLVF Sbjct: 659 DGLVTGVATVNAAQFGEHDARCMVIAYDYTVLAGTQGHMNHKKIDRMLTLVEQWKMPLVF 718 Query: 717 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVII 776 YAEGGGGRPGDTDRLG+TGLDGPSFVQFA+LSGLVPV+GVVSGYCFAGNAAMLG CDVII Sbjct: 719 YAEGGGGRPGDTDRLGLTGLDGPSFVQFARLSGLVPVIGVVSGYCFAGNAAMLGCCDVII 778 Query: 777 ATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSY 836 AT+NASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGV+DILVEDEEEAT VAQKYLSY Sbjct: 779 ATQNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVVDILVEDEEEATRVAQKYLSY 838 Query: 837 FQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIR 896 FQG V+DW+A DQRLLRRAIPENRLRVYD+R+VIDLIADE SVLEIRRDFGVGM+TAFIR Sbjct: 839 FQGPVKDWRAADQRLLRRAIPENRLRVYDVRHVIDLIADEDSVLEIRRDFGVGMVTAFIR 898 Query: 897 IEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKT 956 IEGKPFGLIANNPKHLGGAIDA AGDKAARF+QLCDAFDIPIVSLCDTPGFMVGPEAEKT Sbjct: 899 IEGKPFGLIANNPKHLGGAIDAAAGDKAARFLQLCDAFDIPIVSLCDTPGFMVGPEAEKT 958 Query: 957 AIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGL 1016 AIVRHVARMFVTGAS+TVPLFG+VLRKGYGLGAQSMIGGGFHASFFT AWPTGEFGGMGL Sbjct: 959 AIVRHVARMFVTGASLTVPLFGIVLRKGYGLGAQSMIGGGFHASFFTAAWPTGEFGGMGL 1018 Query: 1017 EGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWI 1076 EGYVRLGFRKEMEAI DPVERE Y++ KVAE+YANGKAVSIASV EID VIDPA+TR WI Sbjct: 1019 EGYVRLGFRKEMEAIADPVERETYYKNKVAEMYANGKAVSIASVCEIDNVIDPAETRRWI 1078 Query: 1077 MAGLRSVPKPEPRTHRKRPCIDAW 1100 MAGLRSVP P R RKRPCIDAW Sbjct: 1079 MAGLRSVPTPPQREGRKRPCIDAW 1102 >ref|YP_567741.1| carbamoyl-phosphate synthase L chain, ATP-binding [Rhodopseudomonas palustris BisB5] gb|ABE37840.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Rhodopseudomonas palustris BisB5] Length = 1102 Score = 1766 bits (4575), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/1103 (81%), Positives = 984/1103 (89%), Gaps = 4/1103 (0%) Query: 1 MSFKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAY 60 M F+ LLIANRGEIAIRIARAAAD+G+ATVAI+PADD+ASLH+R AD + EIPGRGARAY Sbjct: 1 MPFRKLLIANRGEIAIRIARAAADAGLATVAIYPADDSASLHLRIADEAREIPGRGARAY 60 Query: 61 LDIEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAK 120 LDIE VIAAAKA CDALHPGYGFLSEN LARRCAEE ITFVGPSPEAL LFGDK AK Sbjct: 61 LDIEGVIAAAKAAHCDALHPGYGFLSENADLARRCAEEGITFVGPSPEALRLFGDKVAAK 120 Query: 121 ALAKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDE 180 LAK+CGVPIIAGT+G ++L + KAFFA LG AAVMIKA+AGGGGRGMR+VE A L+E Sbjct: 121 ELAKRCGVPIIAGTTGPSTLQDVKAFFASLGDAAAVMIKAMAGGGGRGMRIVERADDLEE 180 Query: 181 AYARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 AYARCQSEAKAAFGSD VY ERLIRKARH+EVQIIGDRHG IS LWERECTIQRRNQKLI Sbjct: 181 AYARCQSEAKAAFGSDGVYAERLIRKARHIEVQIIGDRHGGISQLWERECTIQRRNQKLI 240 Query: 241 EVAPSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQ 300 E+APSPSLS+ +R RI+ AAK LA+AA YD+LGTFEFLVD EAGES+GAFAFIEANPRLQ Sbjct: 241 EIAPSPSLSDSLRGRIVAAAKALAAAANYDSLGTFEFLVDGEAGESDGAFAFIEANPRLQ 300 Query: 301 VEHTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGVT 360 VEHTVTEEVL IDLVRSQLAVA GATL SLGL Q+AVP PRG+AMQLR+NME MDE G T Sbjct: 301 VEHTVTEEVLSIDLVRSQLAVAGGATLASLGLDQAAVPRPRGFAMQLRINMETMDESGAT 360 Query: 361 KPTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRA 420 KPTGGTL++F+ PSGPGVRVDTFGY+GY+TSAAFDSLLAKVIVH+PS +W DVV KA+RA Sbjct: 361 KPTGGTLAIFEPPSGPGVRVDTFGYAGYKTSAAFDSLLAKVIVHTPS-QWPDVVAKAARA 419 Query: 421 LREFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEHAAPLLEVSEAA 480 LREFRI GV TNIPF+ AILAH F N++ST FID +VA LVGAAQ A PL+ A Sbjct: 420 LREFRIDGVGTNIPFIQAILAHADFKANRVSTGFIDRNVAELVGAAQGFAGPLIATPGAT 479 Query: 481 A---AKPATIEAAPEGSLPVPAPLQGTIVAIEVAEGDLVRPGQQIAVLESMKMEHLVTAP 537 A A A I++AP+G++ + APLQGT+VAI VAEGD+VRPGQQ+AVLESMKMEHLV A Sbjct: 480 AHQGAASAKIDSAPDGAVAITAPLQGTVVAITVAEGDVVRPGQQLAVLESMKMEHLVIAE 539 Query: 538 HGGRVTRIAGGIGVTLMHGEPILFFEPAEVDGHHAAEEAAIDLDHIRPDLAELIARKAIT 597 GGR+ RI GVTLM GE IL+ EP +++G AEE +DLD IRPDLAE++AR+ T Sbjct: 540 QGGRIRRIVTADGVTLMQGEAILYLEPQDIEGDQLAEEDEVDLDEIRPDLAEMLARQGNT 599 Query: 598 LDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPAD 657 D +RP +VERRRKTNQRTARENIAQLVD+GSF+EYGSLAIAAQRRRR ++DLIKNTPAD Sbjct: 600 SDNSRPDAVERRRKTNQRTARENIAQLVDDGSFMEYGSLAIAAQRRRRSLDDLIKNTPAD 659 Query: 658 GLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVFY 717 GLI+GVATVNA FG GARCMVI+YDYTVLAGTQGHMNHKKIDRML L EQWR+PLVFY Sbjct: 660 GLIAGVATVNAAQFGEHGARCMVIAYDYTVLAGTQGHMNHKKIDRMLTLVEQWRIPLVFY 719 Query: 718 AEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVIIA 777 AEGGGGRPGDTDRLG+TGLDGPSFVQFA+LSGLVPVVGVVSGYCFAGNAAMLG CDVIIA Sbjct: 720 AEGGGGRPGDTDRLGLTGLDGPSFVQFARLSGLVPVVGVVSGYCFAGNAAMLGCCDVIIA 779 Query: 778 TKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSYF 837 T+NASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGV+DILVEDEEEAT VAQKYLSYF Sbjct: 780 TQNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVVDILVEDEEEATRVAQKYLSYF 839 Query: 838 QGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIRI 897 QGAV +W+A DQRLLRRAIPENRLRVYDIR+VIDLIADEGSVLE+RRDFGVGMITAFIR+ Sbjct: 840 QGAVSEWRASDQRLLRRAIPENRLRVYDIRHVIDLIADEGSVLELRRDFGVGMITAFIRV 899 Query: 898 EGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKTA 957 EGKPFGLIANNPKHLGGAIDA AGDKAARF+QLCDAFDIPIVSLCDTPGFMVGPEAEKTA Sbjct: 900 EGKPFGLIANNPKHLGGAIDADAGDKAARFLQLCDAFDIPIVSLCDTPGFMVGPEAEKTA 959 Query: 958 IVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGLE 1017 IVRHVARMFVTGAS+TVPLFG+VLRKGYGLGAQSM+GGGFHASFFT AWPTGEFGGMGLE Sbjct: 960 IVRHVARMFVTGASLTVPLFGIVLRKGYGLGAQSMLGGGFHASFFTAAWPTGEFGGMGLE 1019 Query: 1018 GYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWIM 1077 GYVRLGFRKEMEAI DPVERE Y++ KVAE+YANGKAVSIASVLEID VIDPA+TR WIM Sbjct: 1020 GYVRLGFRKEMEAIADPVERETYYKNKVAEMYANGKAVSIASVLEIDNVIDPAETRRWIM 1079 Query: 1078 AGLRSVPKPEPRTHRKRPCIDAW 1100 AGLRSVP P R RKRPCIDAW Sbjct: 1080 AGLRSVPTPPQRDGRKRPCIDAW 1102 >ref|NP_946800.1| putative pyruvate carboxylase [Rhodopseudomonas palustris CGA009] emb|CAE26893.1| putative pyruvate carboxylase [Rhodopseudomonas palustris CGA009] Length = 1103 Score = 1764 bits (4568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 894/1104 (80%), Positives = 975/1104 (88%), Gaps = 5/1104 (0%) Query: 1 MSFKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAY 60 M F+ LLIANRGEIAIRIARAAA+SG+ TVAIHPADDAASLHVR AD + +IPGRGARAY Sbjct: 1 MPFRKLLIANRGEIAIRIARAAAESGLTTVAIHPADDAASLHVRIADHAEQIPGRGARAY 60 Query: 61 LDIEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAK 120 LDIEAVI AAKA GCDALHPGYGFLSEN LARRCAEE ITF+GPSPEAL LFGDK AK Sbjct: 61 LDIEAVIVAAKAAGCDALHPGYGFLSENADLARRCAEEGITFIGPSPEALRLFGDKVAAK 120 Query: 121 ALAKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDE 180 LAK+CGVPIIAGT G ++L+E +AFFA LG AVMIKA+AGGGGRGMR+VE A +L + Sbjct: 121 ELAKRCGVPIIAGTIGPSTLEEVQAFFASLGDKPAVMIKAMAGGGGRGMRVVERAEELAD 180 Query: 181 AYARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 AYARCQSEAKAAFG + VY ERLIR ARH+EVQIIGDRHG +S LWERECTIQRRNQKLI Sbjct: 181 AYARCQSEAKAAFGYEGVYAERLIRNARHIEVQIIGDRHGNVSQLWERECTIQRRNQKLI 240 Query: 241 EVAPSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQ 300 E+APSPSLSEG+R+RI++AAK LA+AA YD+LGTFEFLVD EAGE +GAFAFIEANPRLQ Sbjct: 241 EIAPSPSLSEGLRSRIVDAAKTLAAAANYDSLGTFEFLVDSEAGEGDGAFAFIEANPRLQ 300 Query: 301 VEHTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGVT 360 VEHTVTEEVL +DLVRSQLAVA GA L +LGL Q++VP PRG+A+QLRVNME MD KG T Sbjct: 301 VEHTVTEEVLSVDLVRSQLAVAGGAMLTALGLDQASVPRPRGFAIQLRVNMETMDAKGAT 360 Query: 361 KPTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRA 420 KPTGGTL++F+ PSGPGVRVDTFGY+GY TSAA+DSLLAKVIVH W + V KASRA Sbjct: 361 KPTGGTLAIFEPPSGPGVRVDTFGYAGYTTSAAYDSLLAKVIVHGRG-DWAEAVAKASRA 419 Query: 421 LREFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEHAAPLLEVSEA- 479 LREFR GGV TNIP L AILAH F N++ST+FID HVA LV AAQ+ PL+ A Sbjct: 420 LREFRAGGVVTNIPLLQAILAHNDFKANRVSTSFIDRHVADLVEAAQQFDQPLIATDGAD 479 Query: 480 ---AAAKPATIEAAPEGSLPVPAPLQGTIVAIEVAEGDLVRPGQQIAVLESMKMEHLVTA 536 +AA A+ E PEG++ + APLQGT+VAI VAEGD+VRPGQQ+AV+ESMKMEHLV A Sbjct: 480 NRSSAAAAASKEPVPEGAVAIAAPLQGTVVAITVAEGDVVRPGQQLAVIESMKMEHLVAA 539 Query: 537 PHGGRVTRIAGGIGVTLMHGEPILFFEPAEVDGHHAAEEAAIDLDHIRPDLAELIARKAI 596 GGR+ RI GVTLM GEPIL+FEP EV+G H E +DLD IRPDLAE++AR+A Sbjct: 540 EQGGRIRRIVATDGVTLMQGEPILYFEPQEVEGDHVVAEQDVDLDAIRPDLAEMLARQAN 599 Query: 597 TLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPA 656 TLDENRP SV RRRKTNQRTAREN+AQLVDEGSF+EYGSLAIAAQRRRR ++DLIKNTPA Sbjct: 600 TLDENRPDSVGRRRKTNQRTARENVAQLVDEGSFMEYGSLAIAAQRRRRPLDDLIKNTPA 659 Query: 657 DGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVF 716 DGL++GVATVNAK FG ARCMVI+YDYTVLAGTQGHMNHKKIDRML L EQWRMPLVF Sbjct: 660 DGLVTGVATVNAKQFGEHAARCMVIAYDYTVLAGTQGHMNHKKIDRMLTLVEQWRMPLVF 719 Query: 717 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVII 776 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVG+VSGYCFAGNAAMLG CDVII Sbjct: 720 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGIVSGYCFAGNAAMLGCCDVII 779 Query: 777 ATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSY 836 AT+NASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGV+DILV+DEEEAT VAQKYLSY Sbjct: 780 ATQNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVVDILVQDEEEATRVAQKYLSY 839 Query: 837 FQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIR 896 FQGAV +WKAPDQRLLR+AIPENRLRVYDIR+VIDLIADE SVLE+RRDFGVGMITAFIR Sbjct: 840 FQGAVAEWKAPDQRLLRQAIPENRLRVYDIRSVIDLIADEESVLELRRDFGVGMITAFIR 899 Query: 897 IEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKT 956 IEGKPFGLIANNPKHLGGAIDA AGDKAARF+QLCDAFDIPIVSLCDTPGFMVGPEAEKT Sbjct: 900 IEGKPFGLIANNPKHLGGAIDADAGDKAARFLQLCDAFDIPIVSLCDTPGFMVGPEAEKT 959 Query: 957 AIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGL 1016 AIVRHVARMFVTGAS+TVPLFG+VLRKGYGLGAQSMIGGGFHASFFT AWPTGEFGGMGL Sbjct: 960 AIVRHVARMFVTGASLTVPLFGIVLRKGYGLGAQSMIGGGFHASFFTAAWPTGEFGGMGL 1019 Query: 1017 EGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWI 1076 EGYVRLGFRKEMEAI DP ERE Y++ KVAELYANGKAVSIASV EID VIDPA+TR W+ Sbjct: 1020 EGYVRLGFRKEMEAIADPAEREAYYKNKVAELYANGKAVSIASVFEIDNVIDPAETRRWV 1079 Query: 1077 MAGLRSVPKPEPRTHRKRPCIDAW 1100 MAGLRSVP P RT RKRPCID W Sbjct: 1080 MAGLRSVPTPPARTERKRPCIDTW 1103 >ref|YP_001990640.1| carbamoyl-phosphate synthase L chain ATP-binding [Rhodopseudomonas palustris TIE-1] gb|ACF00165.1| Carbamoyl-phosphate synthase L chain ATP-binding [Rhodopseudomonas palustris TIE-1] Length = 1103 Score = 1747 bits (4524), Expect = 0.0, Method: Compositional matrix adjust. Identities = 896/1104 (81%), Positives = 976/1104 (88%), Gaps = 5/1104 (0%) Query: 1 MSFKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAY 60 M F+ LLIANRGEIAIRIARAAA+SG+ TVAIHPADDAASLHVR AD + +IPGRGARAY Sbjct: 1 MPFRKLLIANRGEIAIRIARAAAESGLTTVAIHPADDAASLHVRIADHAEQIPGRGARAY 60 Query: 61 LDIEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAK 120 LDIEAVIAAAKA GCDALHPGYGFLSEN LARRCAEE ITFVGPSPEAL LFGDK AK Sbjct: 61 LDIEAVIAAAKAAGCDALHPGYGFLSENADLARRCAEEGITFVGPSPEALRLFGDKVAAK 120 Query: 121 ALAKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDE 180 LAK+CGVPIIAGT G ++L+E +AFFA LG AVMIKA+AGGGGRGMR+VE A L + Sbjct: 121 ELAKRCGVPIIAGTIGPSTLEEVQAFFASLGDKPAVMIKAMAGGGGRGMRVVERAEDLAD 180 Query: 181 AYARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLI 240 AYARCQSEAKAAFG + VY ERLIR ARH+EVQIIGDRHG +S LWERECTIQRRNQKLI Sbjct: 181 AYARCQSEAKAAFGYEGVYAERLIRNARHIEVQIIGDRHGNVSQLWERECTIQRRNQKLI 240 Query: 241 EVAPSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQ 300 E+APSPSLSEG+R+RI+EAAK LA+AA YD+LGTFEFLVD EAGE +GAFAFIEANPRLQ Sbjct: 241 EIAPSPSLSEGLRSRIVEAAKTLAAAANYDSLGTFEFLVDSEAGEGDGAFAFIEANPRLQ 300 Query: 301 VEHTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGVT 360 VEHTVTEEVL +DLVRSQLAVA GA L +LGL Q++VP PRG+A+QLRVNME MD KG T Sbjct: 301 VEHTVTEEVLSVDLVRSQLAVAGGAMLTALGLDQASVPRPRGFAIQLRVNMETMDAKGAT 360 Query: 361 KPTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRA 420 KPTGGTL++F+ PSGPGVRVDTFGY+GY TSAA+DSLLAKVIVH W + V KASRA Sbjct: 361 KPTGGTLAIFEPPSGPGVRVDTFGYAGYTTSAAYDSLLAKVIVHGRG-DWAEAVAKASRA 419 Query: 421 LREFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEHAAPLLEVSEA- 479 LREFR+GGVATNIP L AILAH F N++ST+FID HVA LV AAQ+ PL+ A Sbjct: 420 LREFRVGGVATNIPLLQAILAHADFKANRVSTSFIDRHVAELVEAAQQFDRPLIATEGAD 479 Query: 480 ---AAAKPATIEAAPEGSLPVPAPLQGTIVAIEVAEGDLVRPGQQIAVLESMKMEHLVTA 536 +AA A+ E PEG++ + APLQGT+VAI VAEGD+VRPGQQ+AV+ESMKMEHLV A Sbjct: 480 NGSSAAAAASKEPVPEGAVAIAAPLQGTVVAITVAEGDVVRPGQQLAVIESMKMEHLVAA 539 Query: 537 PHGGRVTRIAGGIGVTLMHGEPILFFEPAEVDGHHAAEEAAIDLDHIRPDLAELIARKAI 596 GGR+ RI GVTLM GEPIL+FEP +V+G H E IDLD IR DLAE++AR+A Sbjct: 540 EQGGRIRRIVAADGVTLMQGEPILYFEPQDVEGDHVVAEEDIDLDAIRQDLAEMLARQAN 599 Query: 597 TLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPA 656 TLDENRP SV RRRKTNQRTAREN+AQLVDEGSF+EYGSLAIAAQRRRR ++DLIKNTPA Sbjct: 600 TLDENRPDSVGRRRKTNQRTARENVAQLVDEGSFMEYGSLAIAAQRRRRPLDDLIKNTPA 659 Query: 657 DGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVF 716 DGL++GVAT+NAK FG ARCMVI+YDYTVLAGTQGHMNHKKIDRML L EQWRMPLVF Sbjct: 660 DGLVTGVATINAKQFGEHVARCMVIAYDYTVLAGTQGHMNHKKIDRMLTLVEQWRMPLVF 719 Query: 717 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVII 776 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLG CDVII Sbjct: 720 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGCCDVII 779 Query: 777 ATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSY 836 AT+NASIGMGGPAMIEGGGLGVYHPAEVGPVSFQ+PNGV+DILV+DEEEAT VAQKYLSY Sbjct: 780 ATQNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQAPNGVVDILVQDEEEATRVAQKYLSY 839 Query: 837 FQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIR 896 FQGAV +WKAPDQRLLR+AIPENRLRVYDIR+VIDLIADE SVLE+RRDFGVGMITAFIR Sbjct: 840 FQGAVSEWKAPDQRLLRQAIPENRLRVYDIRSVIDLIADEDSVLELRRDFGVGMITAFIR 899 Query: 897 IEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKT 956 IEGKPFGLIANNPKHLGGAIDA AGDKAARF+QLCDAFDIPIVSLCDTPGFMVGPEAEKT Sbjct: 900 IEGKPFGLIANNPKHLGGAIDADAGDKAARFLQLCDAFDIPIVSLCDTPGFMVGPEAEKT 959 Query: 957 AIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGL 1016 AIVRHVARMFVTGAS+TVPLFG+VLRKGYGLGAQSMIGGGFHASFFT AWPTGEFGGMGL Sbjct: 960 AIVRHVARMFVTGASLTVPLFGIVLRKGYGLGAQSMIGGGFHASFFTAAWPTGEFGGMGL 1019 Query: 1017 EGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWI 1076 EGYVRLGFRKEMEAI DP ERE Y++ KVAELYANGKAVSIASV EID VIDPA+TR W+ Sbjct: 1020 EGYVRLGFRKEMEAIADPAEREAYYKNKVAELYANGKAVSIASVFEIDNVIDPAETRRWV 1079 Query: 1077 MAGLRSVPKPEPRTHRKRPCIDAW 1100 MAGLRSVP P RT RKRPCID W Sbjct: 1080 MAGLRSVPTPPERTERKRPCIDTW 1103