BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0037.p (514 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769359.1| hypothetical protein blr2719 [Bradyrhizobium ja... 1008 0.0 ref|ZP_02186388.1| hypothetical protein BAL199_16228 [alpha prot... 661 0.0 ref|ZP_05050026.1| FAD dependent oxidoreductase, putative [Octad... 582 e-164 ref|YP_004229915.1| GMC oxidoreductase [Burkholderia sp. CCGE100... 527 e-147 ref|YP_003908634.1| glucose-methanol-choline oxidoreductase [Bur... 526 e-147 >ref|NP_769359.1| hypothetical protein blr2719 [Bradyrhizobium japonicum USDA 110] dbj|BAC47984.1| blr2719 [Bradyrhizobium japonicum USDA 110] Length = 584 Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/512 (92%), Positives = 495/512 (96%) Query: 3 WSLADTKMHILCLDQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRRRPEDYPINDDNSP 62 WSLA+TKMHILCL+QGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVR RPEDYPINDDNSP Sbjct: 73 WSLAETKMHILCLEQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRGRPEDYPINDDNSP 132 Query: 63 IKVVNFNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGV 122 IKVVN+NAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMG Sbjct: 133 IKVVNYNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGT 192 Query: 123 SGLSGDPLSPLSHPPMPQQPLGLSGPLIGKAMNKLGWHWWPSDTTVATMDYEGRARCINL 182 SGLSGDPLSPL+HPPMPQQP+GLSG +IGKAMNKLGWHWWPSDTTVATMDYEGRARCINL Sbjct: 193 SGLSGDPLSPLTHPPMPQQPMGLSGAIIGKAMNKLGWHWWPSDTTVATMDYEGRARCINL 252 Query: 183 GHCTPACAQGAKASTDITYWPHAVRAGVELKTHCRVREILTNEHGMASGAVYYDKDGVEQ 242 GHCTPACAQGAK+STDITYWPHAVRAGVEL+THCRVREI T+E+GMASG VYYDKDGVEQ Sbjct: 253 GHCTPACAQGAKSSTDITYWPHAVRAGVELRTHCRVREITTDENGMASGVVYYDKDGVEQ 312 Query: 243 FQPAEVVIIACNGVGTPRLLLNSASGKFPNGLANSSGLVGKNLMFHPYAQIYGFVKEPTD 302 FQPA VVIIACNGVGTPRLLLNSASG+FPNGLANSSGLVGKNLMFHPYAQIYG+VKEPTD Sbjct: 313 FQPAHVVIIACNGVGTPRLLLNSASGRFPNGLANSSGLVGKNLMFHPYAQIYGYVKEPTD 372 Query: 303 SNRAPPTCLWSKEFYDTDLSRGFVRGYGIQFGRGAGPVFEAVASEQKGILPWGKDHHRVF 362 SNRAPPTCLWSKE+YDTDLSRGFVRGYG+QF RGAGPVFEAV SEQKGILPWG DHHRVF Sbjct: 373 SNRAPPTCLWSKEWYDTDLSRGFVRGYGVQFVRGAGPVFEAVVSEQKGILPWGADHHRVF 432 Query: 363 RKLNGHRLAVSAICEDLPEEHNRVTLDPVLKDSHGIPAPKIDYTISANSRKMMDHGLARG 422 RKLNGHRL SAICEDLPEEHN VTLDPVLKDSHGIPAPKIDYTIS NSRKMM+H L+RG Sbjct: 433 RKLNGHRLGFSAICEDLPEEHNCVTLDPVLKDSHGIPAPKIDYTISENSRKMMEHALSRG 492 Query: 423 REILEAAGASDICINDPIPWGGWHLLGTARMGTDPARSVVNEWGRSHDVKNLFIVDGSIF 482 RE+LE AGA+DIC+N PIPWGGWHLLGTARMGTDP RSVVNEWGRSHDVKNLFIVDGSIF Sbjct: 493 REVLETAGATDICVNSPIPWGGWHLLGTARMGTDPERSVVNEWGRSHDVKNLFIVDGSIF 552 Query: 483 VTSGGVNPTSTIQALALYIADQMKQRLANLFD 514 VTSGGVNPTSTIQALALYIADQMKQRLANLFD Sbjct: 553 VTSGGVNPTSTIQALALYIADQMKQRLANLFD 584 >ref|ZP_02186388.1| hypothetical protein BAL199_16228 [alpha proteobacterium BAL199] gb|EDP66625.1| hypothetical protein BAL199_16228 [alpha proteobacterium BAL199] Length = 543 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/514 (62%), Positives = 391/514 (76%), Gaps = 2/514 (0%) Query: 3 WSLADTKMHILCLDQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRRRPEDYPINDDNSP 62 WSL +T+M ILCL+QG WM ++YP+T ++WEA+ +G + PNVR DYP+N+ +SP Sbjct: 29 WSLTETRMRILCLEQGDWMVSSQYPTTRKNWEAQQFGAFHVDPNVRGLEADYPVNNTDSP 88 Query: 63 IKVVNFNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGV 122 I V+NFNAVGGST+ Y AH+PRLHPSDF+V+TLDGVADDWP+ YD L P+F +NDR+MGV Sbjct: 89 IDVLNFNAVGGSTIGYAAHFPRLHPSDFRVRTLDGVADDWPVTYDDLEPYFVQNDRIMGV 148 Query: 123 SGLSGDPLSPLSHPPMPQQPLGLSGPLIGKAMNKLGWHWWPSDTTVATMDYEGRARCINL 182 SGL+GDP+ P PP+P P+G G ++ ++LGWHWWPSD + + YEGR +C+NL Sbjct: 149 SGLAGDPMYPPKQPPLPPLPIGRVGEVVAGGFDRLGWHWWPSDAAILSQPYEGRDKCLNL 208 Query: 183 GHCTPACAQGAKASTDITYWPHAVRAGVELKTHCRVREILTNEHGMASGAVYYDKDGVEQ 242 C C+QGAK STDITYWP A+RAGV+L+T CRVRE+ NE GMA G +YYD DG E Sbjct: 209 NPCMSGCSQGAKGSTDITYWPQAIRAGVKLRTRCRVREVTVNEDGMADGVIYYDADGREC 268 Query: 243 FQPAEVVIIACNGVGTPRLLLNSASGKFPNGLANSSGLVGKNLMFHPYAQIYGFVKEPTD 302 Q AEVVI+ACNGVGTPR+LLNS S +FP+GLAN SGLVGKNLMFHP A G +E D Sbjct: 269 VQKAEVVIMACNGVGTPRILLNSKSPQFPDGLANRSGLVGKNLMFHPVALATGVFEERLD 328 Query: 303 SNRAPP-TCLWSKEFYDTDLSRGFVRGYGIQFGRGA-GPVFEAVASEQKGILPWGKDHHR 360 +++ P C+ SKEFY+TD RGFVRGY +Q RGA GP+ A+ G +PWG HH Sbjct: 329 THKGPNGCCILSKEFYETDPDRGFVRGYNMQVTRGAGGPLATAIRGLASGDIPWGPGHHE 388 Query: 361 VFRKLNGHRLAVSAICEDLPEEHNRVTLDPVLKDSHGIPAPKIDYTISANSRKMMDHGLA 420 FR+ H + V A+CEDLPEE NRVTLDP L DS+GIPAPKI Y +S NS+KM+ HGL Sbjct: 389 KFRQRFDHTVQVLAVCEDLPEECNRVTLDPELADSNGIPAPKITYRLSENSKKMLAHGLE 448 Query: 421 RGREILEAAGASDICINDPIPWGGWHLLGTARMGTDPARSVVNEWGRSHDVKNLFIVDGS 480 RG+E++ AAGA +I + GWHLLGTARMGTDP RSVVN WGRSHDVKNLFIVDGS Sbjct: 449 RGKEVMRAAGAKEILETPLLRPSGWHLLGTARMGTDPDRSVVNAWGRSHDVKNLFIVDGS 508 Query: 481 IFVTSGGVNPTSTIQALALYIADQMKQRLANLFD 514 +FVT+GGVNPTSTIQALALYI D++K LANLFD Sbjct: 509 VFVTAGGVNPTSTIQALALYIGDRIKANLANLFD 542 >ref|ZP_05050026.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus 307] gb|EDY76292.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus 307] Length = 539 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 287/520 (55%), Positives = 361/520 (69%), Gaps = 10/520 (1%) Query: 3 WSLADTKMHILCLDQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRRRPEDYPINDDNSP 62 WSL +T+M ILCL+QG + ++PS D+E +G++S PNVR +DYPIN D+S Sbjct: 22 WSLLETRMRILCLEQGPHLADKDFPSRDDDYELSRFGKFSCDPNVRGLKQDYPINADDSC 81 Query: 63 IKVVNFNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGV 122 I VNFNAVGGST+ + HWPR+ PSDFK KTLDGVADDWP+DY L+PF++ ND+ GV Sbjct: 82 IMPVNFNAVGGSTINFLGHWPRMKPSDFKTKTLDGVADDWPVDYATLSPFYDMNDQTTGV 141 Query: 123 SGLSGDPLSPLSHPPMPQQPLGLSGPLIGKAMNKLGWHWWPSDTTVATMDYEGRARCINL 182 SGL+G+P P PP+P P+G G + K N++GWHWWPSD ++ + DY+GR +C+N Sbjct: 142 SGLAGNPAYPKYSPPLPPIPIGKLGQTLAKGFNEMGWHWWPSDVSILSEDYDGRQKCVNA 201 Query: 183 GHCTPACAQGAKASTDITYWPHAVRAGVELKTHCRVREILTNEH-GMASGAVYYDKDGVE 241 G C CA GAK T+ TYWP AGVEL+T CRVREI ++ GMA+G +Y+ DG Sbjct: 202 GTCDLGCAAGAKGGTNFTYWPMLENAGVELRTECRVREITVDQDTGMATGVIYHGSDGQV 261 Query: 242 QFQPAEVVIIACNGVGTPRLLLNSASGKFPNGLANSSGLVGKNLMFHPYAQIYGFVKEPT 301 Q AE+VI+ACNGVGTPRLLLNS S FP+GLAN SG+VGKNLMFHP + G EP Sbjct: 262 HEQKAELVIVACNGVGTPRLLLNSKSKIFPDGLANRSGMVGKNLMFHPLTGVTGVFDEPM 321 Query: 302 DSNRAPPTC-LWSKEFYDTDLSRGFVRGYGIQFGRGAGPVFEAVASEQKGI---LPWGKD 357 + P C + S+EFY+TD +RGFVRGYG+ GR P+ A+ GI +PWG + Sbjct: 322 KGHEGPMACSILSQEFYETDATRGFVRGYGLHSGRSTTPMTYALGG--FGIDNPIPWGDE 379 Query: 358 HHRVFRKLNGHRLAVSAICEDLPEEHNRVTLDPVLKDSHGIPAPKIDYTISANSRKMMDH 417 H V + + ++ + EDLPEEHN VTLDP L DS GI APKI Y + NSRK++ H Sbjct: 380 HRDVMDNVYPYIAGLTVVAEDLPEEHNCVTLDPNLTDSDGISAPKITYRLGENSRKILKH 439 Query: 418 GLARGREILEAAGASDICI--NDPIPW-GGWHLLGTARMGTDPARSVVNEWGRSHDVKNL 474 G R +EIL AAGA+ + +D + W GWH +GT RMG DP+RSVVN WGRSHDVKNL Sbjct: 440 GEERAKEILLAAGANKVLSKGDDAVWWRAGWHQMGTCRMGDDPSRSVVNGWGRSHDVKNL 499 Query: 475 FIVDGSIFVTSGGVNPTSTIQALALYIADQMKQRLANLFD 514 FIVDGSIFVT+G VNPTSTIQALALY+ D +K + LFD Sbjct: 500 FIVDGSIFVTAGAVNPTSTIQALALYVGDSIKTNIETLFD 539 >ref|YP_004229915.1| GMC oxidoreductase [Burkholderia sp. CCGE1001] gb|ADX56855.1| GMC oxidoreductase [Burkholderia sp. CCGE1001] Length = 534 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 254/507 (50%), Positives = 328/507 (64%), Gaps = 1/507 (0%) Query: 7 DTKMHILCLDQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRRRPEDYPINDDNSPIKVV 66 D + I+CL+QG M P+EYPST DWE G +SS+P+VR+ DYPI+D SPI + Sbjct: 26 DRSLRIVCLEQGSVMRPSEYPSTSVDWELSRAGAYSSNPSVRKNAADYPIDDSASPISIA 85 Query: 67 NFNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGVSGLS 126 NFN GGST++Y+AH+PR HPSDF+ ++LDGV DDWP+ Y+ L PFF EN+RMMGV+GL Sbjct: 86 NFNGFGGSTILYSAHFPRFHPSDFRTRSLDGVGDDWPLSYEELKPFFTENERMMGVAGLV 145 Query: 127 GDPLSPLSHPPMPQQPLGLSGPLIGKAMNKLGWHWWPSDTTVATMDYEGRARCINLGHCT 186 GDP +P +P PLG G + A N+LGWHWWPS + + T + R C+NLG C Sbjct: 146 GDPANPDYESLLPPIPLGPMGRTMAGAFNELGWHWWPSYSAINTHRHGNRGACVNLGPCN 205 Query: 187 PACAQGAKASTDITYWPHAVRAGVELKTHCRVREILTNEHGMASGAVYYDKDGVEQFQPA 246 CAQGAKAS D+TYWP A + GVE++T CRVREI + G A G +Y D G E A Sbjct: 206 TGCAQGAKASVDVTYWPLARQQGVEVRTQCRVREITLDAVGNADGVLYMDAAGAEHRLNA 265 Query: 247 EVVIIACNGVGTPRLLLNSASGKFPNGLANSSGLVGKNLMFHPYAQIYGFVKEPTDSNRA 306 VV++AC+GVGTPRLLLNS S FP+GL N +GLVG+NLM HP A S+ Sbjct: 266 RVVVVACSGVGTPRLLLNSKSSAFPDGLLNDNGLVGRNLMLHPLAYTEAVFDHDVQSSIG 325 Query: 307 PP-TCLWSKEFYDTDLSRGFVRGYGIQFGRGAGPVFEAVASEQKGILPWGKDHHRVFRKL 365 P C+ S++FY+T R FVRGY +Q RGA PV AV+ +P G +HH F +L Sbjct: 326 PHGCCILSQQFYETAAERNFVRGYTMQVLRGAPPVETAVSGYFMRQVPLGAEHHAKFNRL 385 Query: 366 NGHRLAVSAICEDLPEEHNRVTLDPVLKDSHGIPAPKIDYTISANSRKMMDHGLARGREI 425 ++ I EDLP+ NRV LD DS G+P K+ YT+ N+ +M+ HG+ +++ Sbjct: 386 FNRTAGIAVITEDLPDPENRVELDTEHCDSSGMPGVKVFYTLGDNTSRMLKHGIEMSKQV 445 Query: 426 LEAAGASDICINDPIPWGGWHLLGTARMGTDPARSVVNEWGRSHDVKNLFIVDGSIFVTS 485 AAGA P+ GWHL+GTARMG DPA SVVN +G++H VKNLFIVD SIFVT+ Sbjct: 446 FAAAGAKVTSSFAPVKHTGWHLMGTARMGDDPATSVVNRYGQAHAVKNLFIVDSSIFVTA 505 Query: 486 GGVNPTSTIQALALYIADQMKQRLANL 512 G VNP +T QAL L D +++ L Sbjct: 506 GAVNPVATAQALTLMACDHLQRNFHAL 532 >ref|YP_003908634.1| glucose-methanol-choline oxidoreductase [Burkholderia sp. CCGE1003] gb|ADN59343.1| glucose-methanol-choline oxidoreductase [Burkholderia sp. CCGE1003] Length = 534 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 253/507 (49%), Positives = 327/507 (64%), Gaps = 1/507 (0%) Query: 7 DTKMHILCLDQGGWMNPAEYPSTGRDWEAKFYGEWSSSPNVRRRPEDYPINDDNSPIKVV 66 D + I+CL+QG P+EYPS DWE G +SS+P+VRR DYPI+D SPI + Sbjct: 26 DRSLRIVCLEQGSVTRPSEYPSASVDWELSRSGAYSSNPSVRRNAADYPIDDSASPISIA 85 Query: 67 NFNAVGGSTVMYTAHWPRLHPSDFKVKTLDGVADDWPIDYDALTPFFEENDRMMGVSGLS 126 NFN GGST++Y+AH+PR HPSDF+ ++LDGV DDWP+ Y+ L PFF EN+RMMGV+GL Sbjct: 86 NFNGFGGSTILYSAHFPRFHPSDFRTRSLDGVGDDWPLSYEELKPFFTENERMMGVAGLV 145 Query: 127 GDPLSPLSHPPMPQQPLGLSGPLIGKAMNKLGWHWWPSDTTVATMDYEGRARCINLGHCT 186 GDP +P +P PLG G + A N+LGWHWWPS + + T + R C+NLG C Sbjct: 146 GDPANPDYESLLPPIPLGPMGRTMAGAFNELGWHWWPSYSAINTHRHGNRGACVNLGPCN 205 Query: 187 PACAQGAKASTDITYWPHAVRAGVELKTHCRVREILTNEHGMASGAVYYDKDGVEQFQPA 246 C QGAK S D+TYWP A + GVE++T CRVREI + G A G +Y D GVEQ A Sbjct: 206 TGCTQGAKGSVDVTYWPVARQQGVEVRTECRVREITLDARGNADGVLYMDAQGVEQRLDA 265 Query: 247 EVVIIACNGVGTPRLLLNSASGKFPNGLANSSGLVGKNLMFHPYAQIYGFVKEPTDSNRA 306 VV++AC+GVGTPRLLLNS S FP+GL N +GLVG+NLM HP A S+ Sbjct: 266 RVVVVACSGVGTPRLLLNSKSSAFPDGLLNDNGLVGRNLMLHPLAYTEAVFDHDVQSSIG 325 Query: 307 PP-TCLWSKEFYDTDLSRGFVRGYGIQFGRGAGPVFEAVASEQKGILPWGKDHHRVFRKL 365 P C+ S++FY+T R FVRGY +Q RGA PV AV+ +P G +HH F +L Sbjct: 326 PHGCCILSQQFYETAAERDFVRGYTMQVLRGAPPVETAVSGYFMRQVPLGAEHHAKFNRL 385 Query: 366 NGHRLAVSAICEDLPEEHNRVTLDPVLKDSHGIPAPKIDYTISANSRKMMDHGLARGREI 425 ++ I EDLPE NRV LDP DS G+P K+ Y + N+ +M+ HG+ +++ Sbjct: 386 FNRTAGIAVITEDLPEPENRVELDPEHCDSSGMPGVKVFYKLGDNTSRMLKHGIEMSKQV 445 Query: 426 LEAAGASDICINDPIPWGGWHLLGTARMGTDPARSVVNEWGRSHDVKNLFIVDGSIFVTS 485 AAGA P+ GWHL+GTARMG + A SVVN++G++H VKNLFIVD SIFVT+ Sbjct: 446 FAAAGAKVTASFAPVKHTGWHLMGTARMGENAATSVVNKYGQAHAVKNLFIVDSSIFVTA 505 Query: 486 GGVNPTSTIQALALYIADQMKQRLANL 512 G VNP +T QAL L D +++ L L Sbjct: 506 GAVNPVATAQALTLMACDHLQRNLDTL 532