BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0018.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770463.1| hypothetical protein blr3823 [Bradyrhizobium ja... 367 2e-99 ref|YP_001204207.1| hypothetical protein BRADO2117 [Bradyrhizobi... 345 9e-93 ref|ZP_08628995.1| hypothetical protein CSIRO_2080 [Bradyrhizobi... 330 3e-88 ref|YP_001238499.1| hypothetical protein BBta_2426 [Bradyrhizobi... 325 7e-87 ref|YP_001525713.1| hypothetical protein AZC_2797 [Azorhizobium ... 286 5e-75 >ref|NP_770463.1| hypothetical protein blr3823 [Bradyrhizobium japonicum USDA 110] dbj|BAC49088.1| blr3823 [Bradyrhizobium japonicum USDA 110] Length = 299 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 211/278 (75%), Positives = 235/278 (84%) Query: 36 SRLPQIALLPDGKRLHLQDGPIDLVIEAKGRDEDVSAAYQAAAERFTGLLGELCAELAEL 95 +RLPQIALL DG+RLHLQDGPIDL++EA+G +V AAY AAA RFTGLL ELC EL EL Sbjct: 2 TRLPQIALLSDGRRLHLQDGPIDLIVEARGGPGEVRAAYDAAARRFTGLLDELCVELTEL 61 Query: 96 RTAADPERCALKGVVARRMHAAVAPFAADCFITPMAAVAGSVAEEILGAMLEAAPLDRAY 155 R AA+P C LKG VARRM+AAVAP+A DCFITPMAAVAGSVAEEILGAML AA LD+AY Sbjct: 62 RKAAEPGACPLKGAVARRMYAAVAPYAPDCFITPMAAVAGSVAEEILGAMLNAASLDQAY 121 Query: 156 VNNGGDIALHLSDGEQFTVGLMDRPDRHGVMRAMTVDADMPVRGIATSGRHGRSFSLGIA 215 VNNGGDIALHL+ GE F+VGLMDRPDR GVMR M VDAD PVRGIATSGRHGRSFSLGIA Sbjct: 122 VNNGGDIALHLARGEHFSVGLMDRPDRDGVMRRMKVDADDPVRGIATSGRHGRSFSLGIA 181 Query: 216 DAVTVLARTASQADAAATVIANAVDLPDHPAILRVPASELQPDSDLGARLVTRDVGPLAE 275 DAVTVLA A+QADAAAT+IANAVDLP HPAI+R PA+ELQPDSDLGARLVTR+VG L+ Sbjct: 182 DAVTVLAAMAAQADAAATIIANAVDLPGHPAIVRQPANELQPDSDLGARLVTRNVGELSP 241 Query: 276 HEIEQALEAGSARARDLLMSGLIEGAALRLLGETRIVG 313 EI ALE+G+ AR L GLIEGA L+L G+ ++G Sbjct: 242 TEISAALESGAECARQLFDRGLIEGAVLQLSGDMLVIG 279 >ref|YP_001204207.1| hypothetical protein BRADO2117 [Bradyrhizobium sp. ORS 278] emb|CAL75970.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 281 Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 187/264 (70%), Positives = 217/264 (82%) Query: 50 LHLQDGPIDLVIEAKGRDEDVSAAYQAAAERFTGLLGELCAELAELRTAADPERCALKGV 109 +HLQDGPIDL+I A G + ++ AAY+AA ERFTGLL ELC+EL+ LR+ ADPE C+LKGV Sbjct: 1 MHLQDGPIDLIIGADGAEAEICAAYRAATERFTGLLDELCSELSYLRSGADPELCSLKGV 60 Query: 110 VARRMHAAVAPFAADCFITPMAAVAGSVAEEILGAMLEAAPLDRAYVNNGGDIALHLSDG 169 VARRMHAAVAPFAA FITPMAAVAG+VA+EILGAML AA L RAYVNNGGDIALHL D Sbjct: 61 VARRMHAAVAPFAAGLFITPMAAVAGAVADEILGAMLSAAKLTRAYVNNGGDIALHLRDA 120 Query: 170 EQFTVGLMDRPDRHGVMRAMTVDADMPVRGIATSGRHGRSFSLGIADAVTVLARTASQAD 229 F+VGLMDRPD G +R MT+ A+ V G+ATSGRHGRSFSLGIADAVTVLAR A+QAD Sbjct: 121 ATFSVGLMDRPDSAGTLRRMTLRANDGVGGVATSGRHGRSFSLGIADAVTVLARNAAQAD 180 Query: 230 AAATVIANAVDLPDHPAILRVPASELQPDSDLGARLVTRDVGPLAEHEIEQALEAGSARA 289 AAATVI NAVDLP HPA++R PA ELQPDSDLG RLVTR+VG L + +I AL +G A Sbjct: 181 AAATVIGNAVDLPGHPAVVRRPACELQPDSDLGHRLVTREVGDLTDDDIATALTSGERSA 240 Query: 290 RDLLMSGLIEGAALRLLGETRIVG 313 ++LL +G+IEGA L+L G R+VG Sbjct: 241 QNLLAAGVIEGAVLQLGGAVRVVG 264 >ref|ZP_08628995.1| hypothetical protein CSIRO_2080 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08354.1| hypothetical protein CSIRO_2080 [Bradyrhizobiaceae bacterium SG-6C] Length = 306 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 191/293 (65%), Positives = 225/293 (76%) Query: 36 SRLPQIALLPDGKRLHLQDGPIDLVIEAKGRDEDVSAAYQAAAERFTGLLGELCAELAEL 95 +RLPQI L DG+RLHLQDGPIDL++EA G V A YQAA RFTGLL ELC EL EL Sbjct: 2 TRLPQIGWLADGRRLHLQDGPIDLIVEAHGAPPMVRAGYQAAIRRFTGLLDELCEELPEL 61 Query: 96 RTAADPERCALKGVVARRMHAAVAPFAADCFITPMAAVAGSVAEEILGAMLEAAPLDRAY 155 R AA P C+LK VVAR+MH AV PFAADCFITPMAAVAG+VAEEILGAM + A LDRAY Sbjct: 62 RRAAQPGVCSLKSVVARQMHDAVVPFAADCFITPMAAVAGAVAEEILGAMTKVADLDRAY 121 Query: 156 VNNGGDIALHLSDGEQFTVGLMDRPDRHGVMRAMTVDADMPVRGIATSGRHGRSFSLGIA 215 VNNGGDIALHL G+ F VGL+DRPD ++ + A+ RG+ATSG GRSFSLGIA Sbjct: 122 VNNGGDIALHLGKGQSFVVGLVDRPDMPSLVGKTRITANDVTRGVATSGWRGRSFSLGIA 181 Query: 216 DAVTVLARTASQADAAATVIANAVDLPDHPAILRVPASELQPDSDLGARLVTRDVGPLAE 275 DAVTVLARTA+QADA AT++ANAVDLPDHPA++R A ++QPD+DLGARLVTR VG L Sbjct: 182 DAVTVLARTAAQADATATILANAVDLPDHPAVVRCAARDVQPDNDLGARLVTRGVGRLPF 241 Query: 276 HEIEQALEAGSARARDLLMSGLIEGAALRLLGETRIVGATGMGASASHALQGQ 328 +I+ AL+AG RAR+L+++GL+EGAAL L GETR+V + S + Q Sbjct: 242 RDIQIALDAGVNRARNLVVAGLVEGAALHLQGETRVVALKDIETQPSFTFRRQ 294 >ref|YP_001238499.1| hypothetical protein BBta_2426 [Bradyrhizobium sp. BTAi1] gb|ABQ34593.1| hypothetical protein BBta_2426 [Bradyrhizobium sp. BTAi1] Length = 281 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 216/265 (81%) Query: 50 LHLQDGPIDLVIEAKGRDEDVSAAYQAAAERFTGLLGELCAELAELRTAADPERCALKGV 109 +HLQDGPIDL+I A+G + D+ AAYQAAAERFTGLL ELC+EL+ELR AAD +RC + GV Sbjct: 1 MHLQDGPIDLIIGAEGAEADIRAAYQAAAERFTGLLDELCSELSELRKAADQDRCVVNGV 60 Query: 110 VARRMHAAVAPFAADCFITPMAAVAGSVAEEILGAMLEAAPLDRAYVNNGGDIALHLSDG 169 VARRMHAAVAPFAA+ FITPMAAVAG+VAEEILGAM AA L RAYVNNGGDIALHL D Sbjct: 61 VARRMHAAVAPFAAEMFITPMAAVAGAVAEEILGAMRGAATLARAYVNNGGDIALHLEDA 120 Query: 170 EQFTVGLMDRPDRHGVMRAMTVDADMPVRGIATSGRHGRSFSLGIADAVTVLARTASQAD 229 FTVGLMDRPD GVMR +T+ A VRG+ATSGRHGRSFSLGIADAVTVLA +A+QAD Sbjct: 121 ATFTVGLMDRPDAAGVMRRITLHAADAVRGVATSGRHGRSFSLGIADAVTVLAASAAQAD 180 Query: 230 AAATVIANAVDLPDHPAILRVPASELQPDSDLGARLVTRDVGPLAEHEIEQALEAGSARA 289 AAATVIANAVDLP H A++R PA ELQPD+DLG RLVT DVG L+E ++ AL AG A Sbjct: 181 AAATVIANAVDLPGHSAVVRRPACELQPDNDLGHRLVTCDVGVLSETDVATALAAGEHCA 240 Query: 290 RDLLMSGLIEGAALRLLGETRIVGA 314 + LL G IEGA L+L G R VGA Sbjct: 241 QALLSDGRIEGAVLQLHGAIRAVGA 265 >ref|YP_001525713.1| hypothetical protein AZC_2797 [Azorhizobium caulinodans ORS 571] dbj|BAF88795.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 317 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 182/287 (63%), Positives = 212/287 (73%), Gaps = 6/287 (2%) Query: 37 RLPQIALLPDGKRLHLQDGPIDLVIEAKGRDEDVSAAYQAAAERFTGLLGELCAELAELR 96 R PQ+ALL DG RLHLQDGPIDLVIEA+G + V AAY AA ERFTGLL LC EL LR Sbjct: 12 RAPQVALLADGHRLHLQDGPIDLVIEAEGSEPAVRAAYAAAVERFTGLLDALCGELTALR 71 Query: 97 TAADPERCALKGVVARRMHAAVAPFAADCFITPMAAVAGSVAEEILGAMLEAAPLDRAYV 156 A P+ C + G VARRM AVAPFA FITPMAAVAG+VAEE+L A++ L RAYV Sbjct: 72 APASPDLCPVTGPVARRMWEAVAPFAGAHFITPMAAVAGAVAEEVLSALVRPG-LTRAYV 130 Query: 157 NNGGDIALHLSDGEQFTVGLMDRPDRHGVMRAMTVDADMPVRGIATSGRHGRSFSLGIAD 216 NNGGDIAL+L +G +FTVGL+DRPDR + + + PVRG+ATSG GRSFSLGIAD Sbjct: 131 NNGGDIALYLPEGARFTVGLVDRPDRPSLTGTAVLTTESPVRGVATSGWRGRSFSLGIAD 190 Query: 217 AVTVLARTASQADAAATVIANAVDLPDHPAILRVPASELQPDSDLGARLVTRDVGPLAEH 276 AVT+LA TA+ ADAAA+++ANAVDLP H +LRVPA ELQPDSDLG RLVTRDV L+ Sbjct: 191 AVTILAPTAALADAAASIVANAVDLPGHRGVLRVPACELQPDSDLGPRLVTRDVPSLSAA 250 Query: 277 EIEQALEAGSARARDLLMSGLIEGAALRLLGETRIVGATGMGASASH 323 E +AL AG A A+DL+ GLI GAAL L G+T G GA+ +H Sbjct: 251 ERREALGAGLACAQDLVRRGLICGAALHLQGDT-----VGTGAALAH 292