BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0015.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770465.1| ABC transporter substrate-binding protein [Brad... 428 e-118 ref|YP_001204209.1| putative branched-chain amino acid ABC trans... 421 e-116 ref|YP_001238501.1| putative branched-chain amino acid ABC trans... 417 e-115 ref|ZP_08628998.1| ABC transporter substrate-binding protein [Br... 412 e-113 ref|YP_001525710.1| ABC transporter substrate-binding protein [A... 337 8e-91 >ref|NP_770465.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49090.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 214/219 (97%) Query: 1 VFKKLMSAKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 60 VFKKLMS KRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNV FGADLVKLVREGN Sbjct: 182 VFKKLMSEKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVAFGADLVKLVREGN 241 Query: 61 TRGLFKGRTVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYAIKTPEHDAFLKAYQGKYND 120 TRGLFKGR VVSFLTGEPEYLDPLKDETPEGWIVTGYPWY+IKTPEHDAFLKAYQ KYND Sbjct: 242 TRGLFKGREVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYSIKTPEHDAFLKAYQAKYND 301 Query: 121 YPRLGSIVGYQTIKAAAAILAKAGSSDPEKLIAAAEGISMPSPFGEITFRKIDHQSTLGA 180 YPRLGSIVGYQTIK+AAAILAKAGS+DPEKLIAAAEG+SMPSPFGEITFRKIDHQSTLGA Sbjct: 302 YPRLGSIVGYQTIKSAAAILAKAGSTDPEKLIAAAEGLSMPSPFGEITFRKIDHQSTLGA 361 Query: 181 FTGKTALKDGKGIMVDTAYRKGSDYLPSDAEIEKLRPKD 219 + GKTALKDGKG+MVD++Y+KG+DYLPSDAE+EKLRPKD Sbjct: 362 YVGKTALKDGKGVMVDSSYKKGADYLPSDAEVEKLRPKD 400 >ref|YP_001204209.1| putative branched-chain amino acid ABC transporter periplasmic substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75972.1| putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 405 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 210/219 (95%) Query: 1 VFKKLMSAKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 60 VFKKL+S KRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN Sbjct: 187 VFKKLLSEKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 246 Query: 61 TRGLFKGRTVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYAIKTPEHDAFLKAYQGKYND 120 TRGLFK R VVSFLTGEPEYLDPLK+ETPEGWIVTGYPWY+IKTPEHDAFLKAYQ KYND Sbjct: 247 TRGLFKDRKVVSFLTGEPEYLDPLKEETPEGWIVTGYPWYSIKTPEHDAFLKAYQAKYND 306 Query: 121 YPRLGSIVGYQTIKAAAAILAKAGSSDPEKLIAAAEGISMPSPFGEITFRKIDHQSTLGA 180 YPRLGSIVGYQTIK+AAAILAKAGS+D EKLIAAAE +S+PSPFGEITFRKIDHQSTLGA Sbjct: 307 YPRLGSIVGYQTIKSAAAILAKAGSTDAEKLIAAAEDLSVPSPFGEITFRKIDHQSTLGA 366 Query: 181 FTGKTALKDGKGIMVDTAYRKGSDYLPSDAEIEKLRPKD 219 F GKTALKDGKGIMVDT YRKGSDYLPSDAE+ KLRPKD Sbjct: 367 FVGKTALKDGKGIMVDTVYRKGSDYLPSDAEVAKLRPKD 405 >ref|YP_001238501.1| putative branched-chain amino acid ABC transporter periplasmic substrate- binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34595.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 395 Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 210/219 (95%) Query: 1 VFKKLMSAKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 60 VFKKL+S KRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN Sbjct: 177 VFKKLLSEKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 236 Query: 61 TRGLFKGRTVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYAIKTPEHDAFLKAYQGKYND 120 TRGLFK R VVSFLTGEPEYLDPLK+ETPEGWIVTGYPWY+IKTPEHDAFLKAYQ KYND Sbjct: 237 TRGLFKDRKVVSFLTGEPEYLDPLKEETPEGWIVTGYPWYSIKTPEHDAFLKAYQAKYND 296 Query: 121 YPRLGSIVGYQTIKAAAAILAKAGSSDPEKLIAAAEGISMPSPFGEITFRKIDHQSTLGA 180 YPRLGSIVGYQTIK+AAAILAKAGS+D +KLIAAAEG+S+PSPFGEITFRKIDHQSTLGA Sbjct: 297 YPRLGSIVGYQTIKSAAAILAKAGSTDADKLIAAAEGLSVPSPFGEITFRKIDHQSTLGA 356 Query: 181 FTGKTALKDGKGIMVDTAYRKGSDYLPSDAEIEKLRPKD 219 + GKTALKDGKGIMVDT YRKGSDYLPSD E+ KLRPKD Sbjct: 357 YVGKTALKDGKGIMVDTVYRKGSDYLPSDEEVGKLRPKD 395 >ref|ZP_08628998.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08357.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 410 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/219 (89%), Positives = 206/219 (94%) Query: 1 VFKKLMSAKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 60 VFKKL+S KRPDIQWVDEQWPPQGKIDAGP+VQA+A ANPEAILNVTFGADLVK VREGN Sbjct: 192 VFKKLLSEKRPDIQWVDEQWPPQGKIDAGPIVQALANANPEAILNVTFGADLVKFVREGN 251 Query: 61 TRGLFKGRTVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYAIKTPEHDAFLKAYQGKYND 120 TRGLFK R VVSFLTGEPEYLDPLK+ETP GWIVTGYPWY+IKTPEHDAFLKAYQGKYND Sbjct: 252 TRGLFKDRAVVSFLTGEPEYLDPLKEETPSGWIVTGYPWYSIKTPEHDAFLKAYQGKYND 311 Query: 121 YPRLGSIVGYQTIKAAAAILAKAGSSDPEKLIAAAEGISMPSPFGEITFRKIDHQSTLGA 180 YPRLGSIVGYQTIKAAA IL KA S+DPEKLIAAAEG+SM SPFG ITFRKIDHQSTLGA Sbjct: 312 YPRLGSIVGYQTIKAAAEILKKANSTDPEKLIAAAEGLSMSSPFGPITFRKIDHQSTLGA 371 Query: 181 FTGKTALKDGKGIMVDTAYRKGSDYLPSDAEIEKLRPKD 219 F GKTALKDGKGIMVDTAYRKG ++LPSDAE+EK+RPKD Sbjct: 372 FVGKTALKDGKGIMVDTAYRKGENFLPSDAEVEKMRPKD 410 >ref|YP_001525710.1| ABC transporter substrate-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF88792.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 411 Score = 337 bits (864), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 176/219 (80%), Positives = 198/219 (90%) Query: 1 VFKKLMSAKRPDIQWVDEQWPPQGKIDAGPVVQAVAAANPEAILNVTFGADLVKLVREGN 60 VFK+L+SAKRPDI+WV EQWPPQGKIDAG VVQAVAAA P+AI NVTFG DLVKLVREGN Sbjct: 193 VFKQLLSAKRPDIEWVSEQWPPQGKIDAGAVVQAVAAAKPDAIFNVTFGPDLVKLVREGN 252 Query: 61 TRGLFKGRTVVSFLTGEPEYLDPLKDETPEGWIVTGYPWYAIKTPEHDAFLKAYQGKYND 120 TRGLFK R VVS LTGEPEYLDPLKDETPEGWIVTGYPWY++KTPEHDAFLKAYQ K+ND Sbjct: 253 TRGLFKDRPVVSLLTGEPEYLDPLKDETPEGWIVTGYPWYSLKTPEHDAFLKAYQAKFND 312 Query: 121 YPRLGSIVGYQTIKAAAAILAKAGSSDPEKLIAAAEGISMPSPFGEITFRKIDHQSTLGA 180 YPRLGSIVGY T+KAAAAI+ KAGS+D +K+IAAAEGIS+ +P G ITFR IDHQSTLGA Sbjct: 313 YPRLGSIVGYATMKAAAAIINKAGSTDTDKMIAAAEGISVATPLGPITFRAIDHQSTLGA 372 Query: 181 FTGKTALKDGKGIMVDTAYRKGSDYLPSDAEIEKLRPKD 219 F GKT++KDGKG+MVDT YR G+ YLPSD E++KLRP++ Sbjct: 373 FVGKTSVKDGKGVMVDTVYRDGAAYLPSDDEVKKLRPQN 411