BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0249.0012.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770468.1| ABC transporter ATP-binding protein [Bradyrhizo...   254   3e-66
ref|YP_001238504.1| putative high-affinity branched-chain amino ...   251   3e-65
ref|YP_001204212.1| putative high-affinity branched-chain amino ...   251   4e-65
ref|ZP_08627005.1| ABC transporter ATP-binding protein [Bradyrhi...   247   3e-64
ref|YP_001525707.1| ABC transporter [Azorhizobium caulinodans OR...   215   1e-54

>ref|NP_770468.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC49093.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 234

 Score =  254 bits (649), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/132 (93%), Positives = 125/132 (94%)

Query: 13  QPKRPGAPQWDREKLFKLFPNLGEMRGRPGGRMSGGEQQMLAIARTLMGNPSLVLLDEPS 72
           QPKRP AP W R+KLF LFPNLGEM+ RPGGRMSGGEQQML IARTLMGNPSLVLLDEPS
Sbjct: 103 QPKRPNAPYWTRDKLFTLFPNLGEMKNRPGGRMSGGEQQMLTIARTLMGNPSLVLLDEPS 162

Query: 73  EGLSPKIVEQMVDAILAMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 132
           EGLSPKIVEQMVDAIL MKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD
Sbjct: 163 EGLSPKIVEQMVDAILTMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 222

Query: 133 ARPDIRDAHLSL 144
           ARPDIRDAHLSL
Sbjct: 223 ARPDIRDAHLSL 234


>ref|YP_001238504.1| putative high-affinity branched-chain amino acid transport
           ATP-binding protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ34598.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 234

 Score =  251 bits (640), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/132 (90%), Positives = 125/132 (94%)

Query: 13  QPKRPGAPQWDREKLFKLFPNLGEMRGRPGGRMSGGEQQMLAIARTLMGNPSLVLLDEPS 72
           Q  RPG+PQW REKL+KLFPNLGEM+ RPGGRMSGGEQQML IARTLMGNPSLVLLDEPS
Sbjct: 103 QKPRPGSPQWTREKLYKLFPNLGEMKNRPGGRMSGGEQQMLTIARTLMGNPSLVLLDEPS 162

Query: 73  EGLSPKIVEQMVDAILAMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 132
           EGLSPKIVEQMVDAIL MKKEGVS+VVSEQNLHFARLISDRAYIIERGRICF GTMAELD
Sbjct: 163 EGLSPKIVEQMVDAILTMKKEGVSLVVSEQNLHFARLISDRAYIIERGRICFAGTMAELD 222

Query: 133 ARPDIRDAHLSL 144
           ARPDIRDAHLS+
Sbjct: 223 ARPDIRDAHLSI 234


>ref|YP_001204212.1| putative high-affinity branched-chain amino acid transport
           ATP-binding protein [Bradyrhizobium sp. ORS 278]
 emb|CAL75975.1| putative high-affinity branched-chain amino acid transport
           ATP-binding proteinputative [Bradyrhizobium sp. ORS 278]
          Length = 234

 Score =  251 bits (640), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 120/132 (90%), Positives = 125/132 (94%)

Query: 13  QPKRPGAPQWDREKLFKLFPNLGEMRGRPGGRMSGGEQQMLAIARTLMGNPSLVLLDEPS 72
           Q  RPGAPQW REKL+KLFPNLGEM+ RPGGRMSGGEQQML IARTLMGNPSLVLLDEPS
Sbjct: 103 QKPRPGAPQWTREKLYKLFPNLGEMKNRPGGRMSGGEQQMLTIARTLMGNPSLVLLDEPS 162

Query: 73  EGLSPKIVEQMVDAILAMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 132
           EGLSPKIVEQMVDAIL MKKEGVS+VVSEQNLHFA+LISDRAYIIERGRICF GTMAELD
Sbjct: 163 EGLSPKIVEQMVDAILTMKKEGVSLVVSEQNLHFAKLISDRAYIIERGRICFAGTMAELD 222

Query: 133 ARPDIRDAHLSL 144
           ARPDIRDAHLS+
Sbjct: 223 ARPDIRDAHLSI 234


>ref|ZP_08627005.1| ABC transporter ATP-binding protein [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP10285.1| ABC transporter ATP-binding protein [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 234

 Score =  247 bits (631), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 116/132 (87%), Positives = 126/132 (95%)

Query: 13  QPKRPGAPQWDREKLFKLFPNLGEMRGRPGGRMSGGEQQMLAIARTLMGNPSLVLLDEPS 72
           QP+R  APQWD +KLF+LFPNLGEMRGRPGGRMSGGEQQML IARTLMGNPSLVLLDEPS
Sbjct: 103 QPRRQNAPQWDHQKLFRLFPNLGEMRGRPGGRMSGGEQQMLTIARTLMGNPSLVLLDEPS 162

Query: 73  EGLSPKIVEQMVDAILAMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 132
           EGLSPKIVEQM++AILAMK+EGVSI++SEQNLHFARLISDRAYIIERG ICF GT+AELD
Sbjct: 163 EGLSPKIVEQMIEAILAMKREGVSILISEQNLHFARLISDRAYIIERGHICFSGTIAELD 222

Query: 133 ARPDIRDAHLSL 144
           ARPDIRDAHLS+
Sbjct: 223 ARPDIRDAHLSI 234


>ref|YP_001525707.1| ABC transporter [Azorhizobium caulinodans ORS 571]
 dbj|BAF88789.1| ABC transporter related protein [Azorhizobium caulinodans ORS 571]
          Length = 234

 Score =  215 bits (548), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 118/132 (89%)

Query: 13  QPKRPGAPQWDREKLFKLFPNLGEMRGRPGGRMSGGEQQMLAIARTLMGNPSLVLLDEPS 72
           QP RPG   W  E+++++FPNLGEMR RPGG+MSGGEQQML I RTLMGNPSLVLLDEPS
Sbjct: 103 QPARPGVATWTPERIYEIFPNLGEMRKRPGGQMSGGEQQMLTIGRTLMGNPSLVLLDEPS 162

Query: 73  EGLSPKIVEQMVDAILAMKKEGVSIVVSEQNLHFARLISDRAYIIERGRICFGGTMAELD 132
           EGL+PKIVEQM DAIL MK+EG+SIV+SEQNLHFA+LISDRAYIIE+GR+ F GTMAEL+
Sbjct: 163 EGLAPKIVEQMADAILTMKREGLSIVISEQNLHFAKLISDRAYIIEKGRMRFSGTMAELE 222

Query: 133 ARPDIRDAHLSL 144
           A P+IRDA+L++
Sbjct: 223 ANPEIRDAYLAV 234