BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0010.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001895720.1| hypothetical protein Bphyt_2094 [Burkholderi... 296 1e-78 ref|YP_558847.1| transmembrane protein [Burkholderia xenovorans ... 291 5e-77 ref|ZP_03265719.1| conserved hypothetical protein [Burkholderia ... 283 1e-74 ref|YP_003606837.1| hypothetical protein BC1002_3284 [Burkholder... 280 1e-73 ref|YP_555365.1| hypothetical protein Bxe_C0089 [Burkholderia xe... 275 4e-72 >ref|YP_001895720.1| hypothetical protein Bphyt_2094 [Burkholderia phytofirmans PsJN] gb|ACD16496.1| conserved transmembrane protein [Burkholderia phytofirmans PsJN] Length = 226 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 151/218 (69%), Positives = 180/218 (82%) Query: 1 MSPADWTPAWLWLAVIASGLYHGINPGMGWPLAVSAGLMQRSSRALLAALGPLAIGHLLA 60 M W+ LWLA++ASGLYHGINP MGWPLAVS+ LM+R +RAL AL LA+GH++A Sbjct: 1 MIGGGWSQTGLWLAILASGLYHGINPAMGWPLAVSSALMERHTRALFGALVYLALGHVMA 60 Query: 61 MLLVILPFALLITLVEWQRTIRIGASLLVILFGVYRLIDRRHPRALARIPPTQLALWSFA 120 +LLV+LPFA+L L+ WQR I++GAS+LVI FGV+ LI RRHPR L RIPP++L LWSFA Sbjct: 61 VLLVMLPFAMLTILLAWQRAIQVGASVLVIGFGVFLLIRRRHPRVLVRIPPSRLTLWSFA 120 Query: 121 VAIAHGAALMLVPIYLGLCREAEADQGHAAANSLIDTSLTMAVLVSMVHAGAMIAAGGCL 180 VAIAHGA LMLVPIYLGLC + D+GH AA +LI+ +L MA+LVS VHAGAM+ AGG L Sbjct: 121 VAIAHGAGLMLVPIYLGLCSAYDMDRGHRAAQTLIEANLGMALLVSGVHAGAMMIAGGLL 180 Query: 181 AWLVYRYLGLKFVSRSWFNLDTVWALSLVLVGAVALVL 218 AWLVYRYLGLKFVSRSWFNLD VWALSLVL+GA++L L Sbjct: 181 AWLVYRYLGLKFVSRSWFNLDAVWALSLVLIGALSLAL 218 >ref|YP_558847.1| transmembrane protein [Burkholderia xenovorans LB400] gb|ABE30795.1| Conserved transmembrane protein [Burkholderia xenovorans LB400] Length = 225 Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 150/218 (68%), Positives = 180/218 (82%), Gaps = 1/218 (0%) Query: 1 MSPADWTPAWLWLAVIASGLYHGINPGMGWPLAVSAGLMQRSSRALLAALGPLAIGHLLA 60 M A W+ LWLA++ASGLYHGINP MGWPLAVS GLM+R +RAL +AL LA+GH+LA Sbjct: 1 MIGAGWSQTGLWLAILASGLYHGINPAMGWPLAVSGGLMERRARALFSALVYLALGHMLA 60 Query: 61 MLLVILPFALLITLVEWQRTIRIGASLLVILFGVYRLIDRRHPRALARIPPTQLALWSFA 120 +LLV+LPFA+L L+ WQR I+IGAS+LVI FGV+ LI RRHPR L RIPP++L LWSF Sbjct: 61 VLLVMLPFAMLTVLLAWQRQIQIGASVLVIGFGVFLLIRRRHPRILTRIPPSRLTLWSFT 120 Query: 121 VAIAHGAALMLVPIYLGLCREAEADQGHAAANSLIDTSLTMAVLVSMVHAGAMIAAGGCL 180 +A+AHGA LMLVPIYLGLCR A DQGH AA +LI+ +L MA+LVS VHA AM+ GG L Sbjct: 121 IALAHGAGLMLVPIYLGLCR-AYDDQGHRAAQTLIEANLGMALLVSGVHACAMMVVGGLL 179 Query: 181 AWLVYRYLGLKFVSRSWFNLDTVWALSLVLVGAVALVL 218 AWLVYRYLGL+FV+RSWFNLDTVWA+SLVLVG ++L + Sbjct: 180 AWLVYRYLGLRFVARSWFNLDTVWAVSLVLVGVLSLAI 217 >ref|ZP_03265719.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EEA02691.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 220 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 149/221 (67%), Positives = 175/221 (79%), Gaps = 4/221 (1%) Query: 1 MSPADWTPAWLWLAVIASGLYHGINPGMGWPLAVSAGLMQRSSRALLAALGPLAIGHLLA 60 MSP A LWLAV+ SG+YHG+NP MGWPLAVS LMQR ++AL AL LA GH LA Sbjct: 1 MSP----QAALWLAVLVSGVYHGLNPAMGWPLAVSNALMQRRAQALFVALLYLAAGHALA 56 Query: 61 MLLVILPFALLITLVEWQRTIRIGASLLVILFGVYRLIDRRHPRALARIPPTQLALWSFA 120 +LL++LPFA+L +++ WQR I+IGASLLVI FG+ L+ RRHPR LARIPP++LALWSFA Sbjct: 57 ILLMMLPFAMLASVLAWQRQIQIGASLLVIGFGLVLLMRRRHPRVLARIPPSRLALWSFA 116 Query: 121 VAIAHGAALMLVPIYLGLCREAEADQGHAAANSLIDTSLTMAVLVSMVHAGAMIAAGGCL 180 VAIAHGA LMLVPIYLGLCR + D H AA +LI+TSL MA+ VS VHA AM AGG L Sbjct: 117 VAIAHGAGLMLVPIYLGLCRAEDMDAAHKAAQTLIETSLRMALSVSAVHAAAMTTAGGVL 176 Query: 181 AWLVYRYLGLKFVSRSWFNLDTVWALSLVLVGAVALVLGLE 221 AWLVYRYLGL+FVSRSWFNLD VWA SL+LVG ++L L + Sbjct: 177 AWLVYRYLGLRFVSRSWFNLDAVWASSLILVGGISLALNVT 217 >ref|YP_003606837.1| hypothetical protein BC1002_3284 [Burkholderia sp. CCGE1002] gb|ADG17326.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 223 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/216 (68%), Positives = 173/216 (80%), Gaps = 4/216 (1%) Query: 1 MSPADWTPAWLWLAVIASGLYHGINPGMGWPLAVSAGLMQRSSRALLAALGPLAIGHLLA 60 MSP A LWLAV+ASG+YHG+NP MGWPLAVS LMQR S+AL+ AL LA GH LA Sbjct: 1 MSP----QAALWLAVVASGVYHGLNPAMGWPLAVSNALMQRRSQALVVALLYLAAGHALA 56 Query: 61 MLLVILPFALLITLVEWQRTIRIGASLLVILFGVYRLIDRRHPRALARIPPTQLALWSFA 120 +LL++LPFA+L +++ WQR ++IGAS+LVI FG+ L+ RRHPR LARIPP++LALWSFA Sbjct: 57 ILLMMLPFAMLSSVLAWQRQMQIGASVLVIGFGLVLLMRRRHPRVLARIPPSRLALWSFA 116 Query: 121 VAIAHGAALMLVPIYLGLCREAEADQGHAAANSLIDTSLTMAVLVSMVHAGAMIAAGGCL 180 VAIAHGA LMLVPIYLGLCR D H AA +LI+TSL MA+ VS VHA M AGG L Sbjct: 117 VAIAHGAGLMLVPIYLGLCRADAMDSAHKAAQALIETSLRMALSVSAVHAATMTVAGGVL 176 Query: 181 AWLVYRYLGLKFVSRSWFNLDTVWALSLVLVGAVAL 216 AWLVYRYLGL+FVSRSWFNLD VWA SL+LVG V+L Sbjct: 177 AWLVYRYLGLRFVSRSWFNLDAVWASSLILVGGVSL 212 >ref|YP_555365.1| hypothetical protein Bxe_C0089 [Burkholderia xenovorans LB400] gb|ABE36015.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 225 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 149/216 (68%), Positives = 172/216 (79%) Query: 1 MSPADWTPAWLWLAVIASGLYHGINPGMGWPLAVSAGLMQRSSRALLAALGPLAIGHLLA 60 M+ W+ LWLAV+ASGLYHG+NP MGWPLAVS+GLMQR RAL+ AL LA GH+LA Sbjct: 1 MTGGGWSQTGLWLAVLASGLYHGVNPAMGWPLAVSSGLMQRRVRALVVALFYLAAGHVLA 60 Query: 61 MLLVILPFALLITLVEWQRTIRIGASLLVILFGVYRLIDRRHPRALARIPPTQLALWSFA 120 M +V+LPFA+L L+ WQR I++GAS+LV FG + LI RRHPR LARIPP +LALWSFA Sbjct: 61 MFVVMLPFAMLAILLAWQREIQLGASVLVAGFGAFLLICRRHPRVLARIPPGRLALWSFA 120 Query: 121 VAIAHGAALMLVPIYLGLCREAEADQGHAAANSLIDTSLTMAVLVSMVHAGAMIAAGGCL 180 VAIAHGA LMLVP+YLGLCR D+ H AA SLID L MA+ VS HA AMIAAGG L Sbjct: 121 VAIAHGAGLMLVPVYLGLCRAYRMDRAHQAAQSLIDADLRMALFVSAAHATAMIAAGGLL 180 Query: 181 AWLVYRYLGLKFVSRSWFNLDTVWALSLVLVGAVAL 216 AWLVYRYLGLKFVSRSWFNLD +WA SL+LVG ++L Sbjct: 181 AWLVYRYLGLKFVSRSWFNLDAIWASSLILVGMLSL 216