BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0001.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769375.1| flavocytochrome C flavoprotein subunit [Bradyrh... 530 e-148 ref|YP_001204474.1| sulfide dehydrogenase [Bradyrhizobium sp. OR... 452 e-125 ref|YP_003693897.1| Flavocytochrome C sulfide dehydrogenase flav... 438 e-121 ref|YP_001238807.1| sulfide dehydrogenase (flavocytochrome), fla... 438 e-121 ref|YP_002499736.1| Flavocytochrome c sulfide dehydrogenase [Met... 417 e-114 >ref|NP_769375.1| flavocytochrome C flavoprotein subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC48000.1| flavocytochrome C flavoprotein subunit [Bradyrhizobium japonicum USDA 110] Length = 426 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/346 (73%), Positives = 289/346 (83%), Gaps = 1/346 (0%) Query: 1 VIAGLRELAAQQFTYDKVAADGITVAAQAATKVDAQARSIALADGTTLSYDRLVLAPGID 60 VIAGLRE+ AQQF YDK+ A+GITV AQAAT VD + RS+ DG TL+YDRLVL+PGID Sbjct: 81 VIAGLREIEAQQFGYDKLVAEGITVVAQAATTVDPERRSVTTTDGATLTYDRLVLSPGID 140 Query: 61 MRFDALSGYDEAAAEKMPHAWKAGEQTMLLRRQLEAMDDGGLVVIAVPAAPLRCPPAPYE 120 +AL GYDEAA+EKMPHAWKAG QT+LLRRQLEAM+DGG V IA+PA P RCPPAPYE Sbjct: 141 FHVEALPGYDEAASEKMPHAWKAGAQTLLLRRQLEAMEDGGTVAIAIPANPSRCPPAPYE 200 Query: 121 RASLIAHYLKANKPKSKILVLDAKDNYSQQKLFEKAWTELYPGMIERIALSQGGRVTSVD 180 RASLIAHYLK KP++K+L+LDAKD++SQQ+LFE+AW ELY MIERI LSQGGRVTSVD Sbjct: 201 RASLIAHYLKTKKPRAKVLILDAKDSFSQQRLFERAWKELYGNMIERIGLSQGGRVTSVD 260 Query: 181 PATNEIVTDFGNYTAAVANVIPPQRAGRIADIAGAADHTGWCPIDPVTFASKLVPNIHVI 240 +T IVT+FGNYT VANVIPPQRAG +A IAGAAD TGWCPIDPVTF SKLVPNIHVI Sbjct: 261 ASTKTIVTEFGNYTPDVANVIPPQRAGHLAQIAGAADATGWCPIDPVTFESKLVPNIHVI 320 Query: 241 GDAAIAGGIPKSASAAAAQGRACAAAIVNSLAGKAPETPRLDGACYNTVAPGYAFSLKGI 300 GDA + GGIPKSASAA+AQG+ACAAAIVN LAG+APETPRL G CY TVAPGY FSL G Sbjct: 321 GDACLGGGIPKSASAASAQGKACAAAIVNLLAGRAPETPRLTGVCYTTVAPGYGFSLAGN 380 Query: 301 YRPKEDQYAEAE-VTTSPVDAPREARQQEADQAFGWFKRITGEAFG 345 Y+P+ D YAE E TSPVDAPRE R +EAD+A WF+ IT + FG Sbjct: 381 YQPRGDIYAEVEGGATSPVDAPRELRAREADEAARWFQTITADTFG 426 >ref|YP_001204474.1| sulfide dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL76237.1| putative sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor (EC 1.8.2.-) [Bradyrhizobium sp. ORS 278] Length = 426 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 238/347 (68%), Positives = 275/347 (79%), Gaps = 2/347 (0%) Query: 1 VIAGLRELAAQQFTYDKVAADGITVAAQAATKVDAQARSIALADGTTLSYDRLVLAPGID 60 VIAGLR+L QQF YDK+AA+G+ V QAAT +DAQA + LADGTTLSYDRLVLAPGID Sbjct: 80 VIAGLRDLGEQQFGYDKIAAEGVRVMLQAATAIDAQAHKVTLADGTTLSYDRLVLAPGID 139 Query: 61 MRFDALSGYDEAAAEKMPHAWKAGEQTMLLRRQLEAMDDGGLVVIAVPAAPLRCPPAPYE 120 + F AL GYDEAA+ MPHA+KAGEQT+LLR+++EAM DGG V I+VPA P RCPPAPYE Sbjct: 140 IDFTALQGYDEAASAIMPHAYKAGEQTVLLRQKIEAMPDGGTVAISVPANPSRCPPAPYE 199 Query: 121 RASLIAHYLKANKPKSKILVLDAKDNYSQQKLFEKAWTELYPGMIERIALSQGGRVTSVD 180 RASLIAHYLK KPKSK+L+LDAKD++SQQKLFE+AW +LYPGMIERI LSQGGRVT VD Sbjct: 200 RASLIAHYLKTRKPKSKVLILDAKDSFSQQKLFEQAWQQLYPGMIERIPLSQGGRVTGVD 259 Query: 181 PATNEIVTDFGNYTAAVANVIPPQRAGRIADIAGAADHTGWCPIDPVTFASKLVPNIHVI 240 T +VT+FGNY VAN+IPPQ+AGRIA +AGA D TGWCPID TFASKLVP++HVI Sbjct: 260 VGTRTVVTEFGNYNPDVANIIPPQKAGRIAALAGAIDRTGWCPIDAATFASKLVPDVHVI 319 Query: 241 GDAAIAGGIPKSASAAAAQGRACAAAIVNSLAGKAPE-TPRLDGACYNTVAPGYAFSLKG 299 GDA + GGIPKSA AA AQG+ACAA I L + E P L G CY+ VAP YAFSL G Sbjct: 320 GDACLGGGIPKSAGAAQAQGKACAAVIARDLIARRIEPPPLLTGICYSLVAPDYAFSLSG 379 Query: 300 IYRPKEDQYAEAE-VTTSPVDAPREARQQEADQAFGWFKRITGEAFG 345 +Y+PK D +AEAE SPVDAP AR EA+ A WFK +T +AFG Sbjct: 380 VYQPKGDLFAEAEGGKASPVDAPPAARAAEANAATAWFKALTDDAFG 426 >ref|YP_003693897.1| Flavocytochrome C sulfide dehydrogenase flavin-binding protein [Starkeya novella DSM 506] gb|ADH89278.1| Flavocytochrome c sulphide dehydrogenase flavin-binding protein [Starkeya novella DSM 506] Length = 413 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 214/347 (61%), Positives = 258/347 (74%), Gaps = 2/347 (0%) Query: 1 VIAGLRELAAQQFTYDKVAADGITVAAQAATKVDAQARSIALADGTTLSYDRLVLAPGID 60 VIAGLR++ AQ F Y + DGI Q +VDA R LAD L YDRLV+APGID Sbjct: 67 VIAGLRDIGAQHFGYGGLEDDGIVHVPQRVVRVDAAQRRAVLADDVMLDYDRLVVAPGID 126 Query: 61 MRFDALSGYDEAAAEKMPHAWKAGEQTMLLRRQLEAMDDGGLVVIAVPAAPLRCPPAPYE 120 MRFDA+ GYD AAAE MPHAWKAGE T+LLRRQLEAM+DGGLVVI+ PA P RCPP PYE Sbjct: 127 MRFDAIPGYDAAAAELMPHAWKAGEPTLLLRRQLEAMEDGGLVVISAPANPFRCPPGPYE 186 Query: 121 RASLIAHYLKANKPKSKILVLDAKDNYSQQKLFEKAWTELYPGMIERIALSQGGRVTSVD 180 RASLIA+YLK +KP+SK+L+LDAKD +S+Q+LFE+AW+ELYPG++E + LS GG+VT+VD Sbjct: 187 RASLIAYYLKTHKPRSKLLILDAKDAFSKQRLFEQAWSELYPGLVEWVGLSFGGKVTAVD 246 Query: 181 PATNEIVTDFGNYTAAVANVIPPQRAGRIADIAGAADHTGWCPIDPVTFASKLVPNIHVI 240 + T+F ++ AAVANVIPPQRAG IA G AD TGWCPIDPVTF S+LVPN+HVI Sbjct: 247 APGRTLTTEFDSHKAAVANVIPPQRAGAIAATIGVADQTGWCPIDPVTFESRLVPNVHVI 306 Query: 241 GDAAIAGGIPKSASAAAAQGRACAAAIVNSLAGKAPETPRLDGACYNTVAPGYAFSLKGI 300 GDAAI G +PKSA A AQ +ACA AI + L G+ PE+P+L CY+ +AP A S+ G+ Sbjct: 307 GDAAIGGAMPKSAFTANAQAKACATAIASLLRGQEPESPKLINTCYSLIAPDQAVSIGGV 366 Query: 301 YRPKEDQYAEAEVT--TSPVDAPREARQQEADQAFGWFKRITGEAFG 345 Y P AE + TSP+DAPR R+QEA A WF+ IT EAFG Sbjct: 367 YEPTNGLLAEVQDAGGTSPLDAPRSVREQEAAYAKDWFETITQEAFG 413 >ref|YP_001238807.1| sulfide dehydrogenase (flavocytochrome), flavoprotein subunit [Bradyrhizobium sp. BTAi1] gb|ABQ34901.1| sulfide dehydrogenase (flavocytochrome), flavoprotein subunit [Bradyrhizobium sp. BTAi1] Length = 425 Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust. Identities = 236/346 (68%), Positives = 275/346 (79%), Gaps = 1/346 (0%) Query: 1 VIAGLRELAAQQFTYDKVAADGITVAAQAATKVDAQARSIALADGTTLSYDRLVLAPGID 60 VIAGLRE++AQQF YDK+AA+G+ V QAA +DA A + LADG TL+YDRLVLAPGID Sbjct: 80 VIAGLREISAQQFGYDKIAAEGVRVVLQAAAAIDAPAHKVTLADGATLAYDRLVLAPGID 139 Query: 61 MRFDALSGYDEAAAEKMPHAWKAGEQTMLLRRQLEAMDDGGLVVIAVPAAPLRCPPAPYE 120 + F AL GYDEAA+ MPHA+KAGEQT+LLR+Q+EAM DGG V IAVPA P RCPPAPYE Sbjct: 140 IDFTALQGYDEAASALMPHAYKAGEQTLLLRQQIEAMPDGGTVAIAVPANPSRCPPAPYE 199 Query: 121 RASLIAHYLKANKPKSKILVLDAKDNYSQQKLFEKAWTELYPGMIERIALSQGGRVTSVD 180 RASLIA YLK KPKSK+L+LDAKD++SQQKLFE+AW ELY GMIERI LSQGGRVT V+ Sbjct: 200 RASLIADYLKTYKPKSKVLILDAKDSFSQQKLFEQAWNELYAGMIERIPLSQGGRVTGVE 259 Query: 181 PATNEIVTDFGNYTAAVANVIPPQRAGRIADIAGAADHTGWCPIDPVTFASKLVPNIHVI 240 AT +VT+FGNY VAN+IPPQ+AGRIA +A AAD TGWCPID TFASKL+P++HVI Sbjct: 260 IATRTVVTEFGNYNPDVANIIPPQKAGRIAALAAAADRTGWCPIDAATFASKLLPDVHVI 319 Query: 241 GDAAIAGGIPKSASAAAAQGRACAAAIVNSLAGKAPETPRLDGACYNTVAPGYAFSLKGI 300 GDA + GGIPKSA AA AQG+ACAA IV L G++ E P L G CY+ VAP AFSL G+ Sbjct: 320 GDACLGGGIPKSAGAAQAQGKACAAVIVRDLTGRSSEPPPLTGICYSLVAPNTAFSLSGV 379 Query: 301 YRPKEDQYAEAE-VTTSPVDAPREARQQEADQAFGWFKRITGEAFG 345 Y+PK D +AE E TS +DAPR AR EAD A WFK +T +AFG Sbjct: 380 YQPKGDLFAEVEGGRTSSLDAPRNARAAEADAATAWFKALTHDAFG 425 >ref|YP_002499736.1| Flavocytochrome c sulfide dehydrogenase [Methylobacterium nodulans ORS 2060] gb|ACL59433.1| Flavocytochrome c sulphide dehydrogenase flavin-binding [Methylobacterium nodulans ORS 2060] Length = 426 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/347 (59%), Positives = 255/347 (73%), Gaps = 2/347 (0%) Query: 1 VIAGLRELAAQQFTYDKVAADGITVAAQAATKVDAQARSIALADGTTLSYDRLVLAPGID 60 V+ GLR + AQ+F Y+ + A G+TV A+ +D +AR +ALADGT L YDRL+L+PGI Sbjct: 80 VMVGLRPMTAQRFGYEGLKASGVTVVQARASGIDGRARRVALADGTALPYDRLILSPGIA 139 Query: 61 MRFDALSGYDEAAAEKMPHAWKAGEQTMLLRRQLEAMDDGGLVVIAVPAAPLRCPPAPYE 120 +RFDAL GYDEAAAE MPHAWKAG QT LL RQL AM DGG VV++VP P RCPP PYE Sbjct: 140 LRFDALPGYDEAAAEVMPHAWKAGAQTELLARQLAAMPDGGTVVLSVPGNPYRCPPGPYE 199 Query: 121 RASLIAHYLKANKPKSKILVLDAKDNYSQQKLFEKAWTELYPGMIERIALSQGGRVTSVD 180 RASLIAH LK KP+SK++VLDAKD +S+QKLFE AW LYP +E + L+ GG+VT+VD Sbjct: 200 RASLIAHLLKTQKPRSKLIVLDAKDTFSKQKLFEAAWKALYPDHLEYVPLAAGGQVTAVD 259 Query: 181 PATNEIVTDFGNYTAAVANVIPPQRAGRIADIAGAADHTGWCPIDPVTFASKLVPNIHVI 240 P T + TDF +Y AAVA +IPPQRA IA AG AD +GWCPIDPVTF S+LVP+IHVI Sbjct: 260 PGTMTVRTDFSDYRAAVACIIPPQRAAPIAAAAGVADRSGWCPIDPVTFESRLVPSIHVI 319 Query: 241 GDAAIAGGIPKSASAAAAQGRACAAAIVNSLAGKAPETPRLDGACYNTVAPGYAFSLKGI 300 GDAAIAG +PKSA +A AQ + CA A+ + LAG+ P TP+L CY+ VAPGY S+ G+ Sbjct: 320 GDAAIAGAMPKSAFSANAQAKVCAEAVADLLAGRPPVTPKLINTCYSLVAPGYGISVAGV 379 Query: 301 YRPKEDQYAEAEVT--TSPVDAPREARQQEADQAFGWFKRITGEAFG 345 Y P A+ E TSP+DAP E R +EA A W++ ITG+ FG Sbjct: 380 YHPVNGVLADVEGAGGTSPLDAPAELRTEEAAHAAAWYRTITGDVFG 426