BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0248.0050.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768849.1| copper tolerance protein [Bradyrhizobium japoni...   227   4e-58
ref|YP_001242335.1| putative copper tolerance protein (cupredoxi...   224   4e-57
ref|YP_001239425.1| putative copper tolerance protein [Bradyrhiz...   222   2e-56
ref|YP_004634336.1| copper-binding protein [Oligotropha carboxid...   191   2e-47
ref|YP_002290594.1| copper tolerance protein [Oligotropha carbox...   190   6e-47

>ref|NP_768849.1| copper tolerance protein [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47474.1| copper tolerance protein [Bradyrhizobium japonicum USDA 110]
          Length = 162

 Score =  227 bits (579), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 101/137 (73%), Positives = 119/137 (86%)

Query: 17  AAVPSRGHEKHGHESYSAGEPGDPSKPSRTVEVEMKEMEFTPFRIEVKRGEQIRFVIRNA 76
           +  P+  H++HGHE++SAGEPGDP KP+RTVE+ M EM + P  I V+RGEQIRFV+RN+
Sbjct: 26  SIAPAIAHDQHGHETFSAGEPGDPKKPARTVEIAMSEMSYEPSNITVERGEQIRFVLRNS 85

Query: 77  GTEDHEFLLATTEENLKHAEVMKKHPHMEHADPNGVRLAPKKSAEIVWKFTKAGTFEYSC 136
           G EDHEFLLATT+ENL+HAEVMKKHPHMEH DPNGVRLAP K+AEI+WKF+KAGTFE+SC
Sbjct: 86  GKEDHEFLLATTKENLEHAEVMKKHPHMEHDDPNGVRLAPSKTAEILWKFSKAGTFEFSC 145

Query: 137 LIPDHRDYGMTGRVIVK 153
           LIPDHRDYGM G V VK
Sbjct: 146 LIPDHRDYGMVGHVTVK 162


>ref|YP_001242335.1| putative copper tolerance protein (cupredoxin) [Bradyrhizobium sp.
           BTAi1]
 gb|ABQ38429.1| Putative Copper tolerance protein (Cupredoxin) [Bradyrhizobium sp.
           BTAi1]
          Length = 153

 Score =  224 bits (571), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 114/132 (86%)

Query: 22  RGHEKHGHESYSAGEPGDPSKPSRTVEVEMKEMEFTPFRIEVKRGEQIRFVIRNAGTEDH 81
           RGHE+HG   YSAGEPGDP  PSRTVEV + EMEFTP RI+VKRGEQIRF++RN G EDH
Sbjct: 22  RGHEQHGAHGYSAGEPGDPKLPSRTVEVLLTEMEFTPARIDVKRGEQIRFMLRNNGKEDH 81

Query: 82  EFLLATTEENLKHAEVMKKHPHMEHADPNGVRLAPKKSAEIVWKFTKAGTFEYSCLIPDH 141
           EFLLAT  ENLKHA VMKKHPHMEHA+PNG RLAP K+ E++W+FTKAGTFEYSCLIPDH
Sbjct: 82  EFLLATKTENLKHAAVMKKHPHMEHAEPNGARLAPGKTTELLWRFTKAGTFEYSCLIPDH 141

Query: 142 RDYGMTGRVIVK 153
           RDYGMTG V VK
Sbjct: 142 RDYGMTGHVSVK 153


>ref|YP_001239425.1| putative copper tolerance protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ35519.1| putative Copper tolerance protein [Bradyrhizobium sp. BTAi1]
          Length = 151

 Score =  222 bits (565), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/130 (78%), Positives = 114/130 (87%)

Query: 24  HEKHGHESYSAGEPGDPSKPSRTVEVEMKEMEFTPFRIEVKRGEQIRFVIRNAGTEDHEF 83
           H+   H SYSAGEPGDP+KPSRT+E+EM EM + P RIEVKRGEQIRF+IRNAG EDHEF
Sbjct: 22  HDHGQHSSYSAGEPGDPTKPSRTIEIEMSEMTYEPIRIEVKRGEQIRFIIRNAGREDHEF 81

Query: 84  LLATTEENLKHAEVMKKHPHMEHADPNGVRLAPKKSAEIVWKFTKAGTFEYSCLIPDHRD 143
            LATT+ENLKH  VM+KHPHMEH +PNGVR+APKK+AEIVWKFTK GTFEYSCLIPDHR+
Sbjct: 82  QLATTKENLKHGAVMRKHPHMEHDEPNGVRVAPKKTAEIVWKFTKPGTFEYSCLIPDHRE 141

Query: 144 YGMTGRVIVK 153
           YGMTG V VK
Sbjct: 142 YGMTGHVTVK 151


>ref|YP_004634336.1| copper-binding protein [Oligotropha carboxidovorans OM5]
 gb|AEI04590.1| copper-binding protein [Oligotropha carboxidovorans OM4]
 gb|AEI08219.1| copper-binding protein [Oligotropha carboxidovorans OM5]
          Length = 161

 Score =  191 bits (486), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/161 (59%), Positives = 119/161 (73%), Gaps = 8/161 (4%)

Query: 1   VKQLTGIGVALI---ALSVAAVPSRGHEKHGH-ESYSAGEPGDPSKPSRTVEVEMKE--- 53
           +K+   +G+A+I   A+  +A    G  +H H ES+SAGEPGD  KP+R V+V M E   
Sbjct: 1   MKKWREVGIAVISATAICTSAWAGAGPTEHSHDESFSAGEPGDAKKPARIVQVTMGESDG 60

Query: 54  -MEFTPFRIEVKRGEQIRFVIRNAGTEDHEFLLATTEENLKHAEVMKKHPHMEHADPNGV 112
            M FTP ++EV++ EQI+FV+RN G  DHEF+LATT +N+KHAE MKK+P MEH DPNG 
Sbjct: 61  KMTFTPDKVEVRKDEQIKFVLRNNGELDHEFILATTADNVKHAEAMKKNPDMEHDDPNGT 120

Query: 113 RLAPKKSAEIVWKFTKAGTFEYSCLIPDHRDYGMTGRVIVK 153
           RLAPKK+ EIVWKFTK GTFEYSCLIP HR+ GM G VIVK
Sbjct: 121 RLAPKKTGEIVWKFTKRGTFEYSCLIPGHREAGMIGTVIVK 161


>ref|YP_002290594.1| copper tolerance protein [Oligotropha carboxidovorans OM5]
 gb|ACI94729.1| copper tolerance protein [Oligotropha carboxidovorans OM5]
          Length = 161

 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 118/161 (73%), Gaps = 8/161 (4%)

Query: 1   VKQLTGIGVALI---ALSVAAVPSRGHEKHGH-ESYSAGEPGDPSKPSRTVEVEMKE--- 53
           +K+   +G+A+I   A+  +A    G   H H ES+SAGEPGD  KP+R V+V M E   
Sbjct: 1   MKKWREVGIAVISATAICTSAWAGAGPTGHSHDESFSAGEPGDAKKPARIVQVTMGESDG 60

Query: 54  -MEFTPFRIEVKRGEQIRFVIRNAGTEDHEFLLATTEENLKHAEVMKKHPHMEHADPNGV 112
            M FTP ++EV++ EQI+FV+RN G  DHEF+LATT +N+KHAE MKK+P MEH DPNG 
Sbjct: 61  KMTFTPDKVEVRKDEQIKFVLRNNGELDHEFILATTADNVKHAEAMKKNPDMEHDDPNGT 120

Query: 113 RLAPKKSAEIVWKFTKAGTFEYSCLIPDHRDYGMTGRVIVK 153
           RLAPKK+ EIVWKFTK GTFEYSCLIP HR+ GM G V+VK
Sbjct: 121 RLAPKKTGEIVWKFTKRGTFEYSCLIPGHREAGMIGTVVVK 161