BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0049.p (455 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025776.1| multicopper oxidase type 3 [Afipia sp. 1NLS2]... 828 0.0 ref|YP_002290595.1| twin-arginine translocation pathway signal [... 827 0.0 ref|YP_004634335.1| multicopper oxidase [Oligotropha carboxidovo... 824 0.0 ref|YP_001220465.1| twin-arginine translocation pathway signal; ... 786 0.0 ref|YP_001990114.1| multicopper oxidase type 3 [Rhodopseudomonas... 783 0.0 >ref|ZP_07025776.1| multicopper oxidase type 3 [Afipia sp. 1NLS2] gb|EFI52918.1| multicopper oxidase type 3 [Afipia sp. 1NLS2] Length = 460 Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/436 (90%), Positives = 418/436 (95%) Query: 1 MEQHMFSRRGFLGSAALVTASAVSGRVQAAAIPEAPTMDKVVMQPPLHPTSGPDYRPVVT 60 ME +M SRRGFLG+AALV ASAVSGRVQAA IPEAP MDKV MQPPLHPTSGPDYRPVVT Sbjct: 1 METNMLSRRGFLGTAALVGASAVSGRVQAANIPEAPIMDKVTMQPPLHPTSGPDYRPVVT 60 Query: 61 LNGWSLPWRMNGDWKEFHLVAEPVVREFADGMKGNLWGYNGQAPGPTIEAVEGDKVRIFV 120 LNGWSLPWRMNGDWKEFHLVAEPVVREFADGMK LWGYNGQAPGPTIEAVEGDKVRIFV Sbjct: 61 LNGWSLPWRMNGDWKEFHLVAEPVVREFADGMKAYLWGYNGQAPGPTIEAVEGDKVRIFV 120 Query: 121 TNRLPEHTTVHWHGMIVPSGMDGVGGLNQPHIKPGKTFVYEFEMKHSGTFMYHPHSDEMV 180 TN+LPEHTTVHWHGMIVP+GMDGVGGLNQPHIKPGKTFVYEFEMK+SGTFMYHPHSDEMV Sbjct: 121 TNKLPEHTTVHWHGMIVPNGMDGVGGLNQPHIKPGKTFVYEFEMKNSGTFMYHPHSDEMV 180 Query: 181 QMAMGMMGMFIVHPRDPAFRPVDRDFVFIMSSYLIDPGTYLPKVNEMTDFNMWTWNSRVY 240 QMAMGMMGM IVHPRDP+FRPVDRDFVFIMS+Y IDPGTYLPKVNEMT+FNMWT+NSRV+ Sbjct: 181 QMAMGMMGMVIVHPRDPSFRPVDRDFVFIMSTYDIDPGTYLPKVNEMTNFNMWTFNSRVF 240 Query: 241 PGIDPMPIRLGDRIRVRIGNLTMTNHPIHVHGHNFAVTCTDGGWVPVSAQYPETTTDVPV 300 PGIDP+P+RLGDR+RVRIGNLTMTNHPIH+HGH+FAVTCTDGGW+P SAQ PETTTDVPV Sbjct: 241 PGIDPLPVRLGDRVRVRIGNLTMTNHPIHLHGHHFAVTCTDGGWIPESAQRPETTTDVPV 300 Query: 301 GAVRAFDMLADNPGDWAFHCHKSHHTMNAMGHDMRNFIGVSRKDLAKAVGKLAPDAMVMG 360 GAVRAFD+LADNPGDWA HCHKSHHTMNAMGHDMRN IGVS+KDLAKAVGKLAPDAMVMG Sbjct: 301 GAVRAFDVLADNPGDWALHCHKSHHTMNAMGHDMRNMIGVSKKDLAKAVGKLAPDAMVMG 360 Query: 361 STGMAMGNMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGLGRDDYADPGPYKYPP 420 STGMAMG MEMPAPDNTLPMMTG+GQFGPIEMGGMFTVMKIREG+ RDDY+DPGPYK PP Sbjct: 361 STGMAMGEMEMPAPDNTLPMMTGSGQFGPIEMGGMFTVMKIREGMARDDYSDPGPYKNPP 420 Query: 421 GTVAYEVEAPAAEPAR 436 GTVAYEV+APAAEP R Sbjct: 421 GTVAYEVDAPAAEPVR 436 >ref|YP_002290595.1| twin-arginine translocation pathway signal [Oligotropha carboxidovorans OM5] gb|ACI94730.1| twin-arginine translocation pathway signal [Oligotropha carboxidovorans OM5] Length = 463 Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/461 (86%), Positives = 428/461 (92%), Gaps = 7/461 (1%) Query: 1 MEQHMFSRRGFLGSAALVTASAVSGRVQAAAIPEAPTMDKVVMQPPLHPTSGPDYRPVVT 60 ME +M SRRGFLG+AALV ASAVSGRVQAA IPEAP MDKV MQPPLHPTSGPDYRPVVT Sbjct: 1 METNMLSRRGFLGTAALVGASAVSGRVQAANIPEAPMMDKVTMQPPLHPTSGPDYRPVVT 60 Query: 61 LNGWSLPWRMNGDWKEFHLVAEPVVREFADGMKGNLWGYNGQAPGPTIEAVEGDKVRIFV 120 LNGWSLPWRMNGDWKEFHLVAEPVVREFA+GMK NLWGYNGQ+PGPTIEAVEGDKVRIFV Sbjct: 61 LNGWSLPWRMNGDWKEFHLVAEPVVREFAEGMKANLWGYNGQSPGPTIEAVEGDKVRIFV 120 Query: 121 TNRLPEHTTVHWHGMIVPSGMDGVGGLNQPHIKPGKTFVYEFEMKHSGTFMYHPHSDEMV 180 TN+LPEHTTVHWHGMI+PSGMDGVGGL QPHI PGKTFVYEFE+KHSGTFMYHPHSDEMV Sbjct: 121 TNKLPEHTTVHWHGMILPSGMDGVGGLTQPHIPPGKTFVYEFELKHSGTFMYHPHSDEMV 180 Query: 181 QMAMGMMGMFIVHPRDPAFRPVDRDFVFIMSSYLIDPGTYLPKVNEMTDFNMWTWNSRVY 240 QMAMGMMGMF+VHPRDP+FRPVDRDFVF+MS+YLIDPGTYLPKVNEMTDFNMWTWNSRV+ Sbjct: 181 QMAMGMMGMFVVHPRDPSFRPVDRDFVFVMSTYLIDPGTYLPKVNEMTDFNMWTWNSRVF 240 Query: 241 PGIDPMPIRLGDRIRVRIGNLTMTNHPIHVHGHNFAVTCTDGGWVPVSAQYPETTTDVPV 300 PGIDP+P+RLGD++RVRIGNLTMTNHPIH+HGH+F V+CTDGGWVP SAQ+PETT DVPV Sbjct: 241 PGIDPLPVRLGDKVRVRIGNLTMTNHPIHLHGHHFGVSCTDGGWVPESAQWPETTIDVPV 300 Query: 301 GAVRAFDMLADNPGDWAFHCHKSHHTMNAMGHDMRNFIGVSRKDLAKAVGKLAPDAMVMG 360 GA+RAFD++ADNPGDWAFHCHKSHHTMNAMGHD+RN IGVS+KDLAKAVGKLAPDAMVMG Sbjct: 301 GAIRAFDVIADNPGDWAFHCHKSHHTMNAMGHDVRNLIGVSKKDLAKAVGKLAPDAMVMG 360 Query: 361 STGMAMGNMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGLGRDDYADPGPYKYPP 420 STGMAMG MEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREG+ RDDY+DPGPYK+P Sbjct: 361 STGMAMGEMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGMARDDYSDPGPYKFPA 420 Query: 421 GTVAYEVEAPAAEPARQPPAAPGRK------AKP-SMKGMK 454 GTVAYEV+AP + RQ A P K KP +MKGMK Sbjct: 421 GTVAYEVDAPNGQAPRQGDARPTDKPEDKKSKKPMNMKGMK 461 >ref|YP_004634335.1| multicopper oxidase [Oligotropha carboxidovorans OM5] ref|YP_004631475.1| multicopper oxidase, TAT pathway translocated [Oligotropha carboxidovorans OM5] gb|AEI01659.1| multicopper oxidase, TAT pathway translocated [Oligotropha carboxidovorans OM4] gb|AEI04589.1| multicopper oxidase, TAT pathway translocated [Oligotropha carboxidovorans OM4] gb|AEI05234.1| multicopper oxidase, TAT pathway translocated [Oligotropha carboxidovorans OM5] gb|AEI08218.1| multicopper oxidase, TAT pathway translocated [Oligotropha carboxidovorans OM5] Length = 459 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/457 (86%), Positives = 425/457 (92%), Gaps = 7/457 (1%) Query: 5 MFSRRGFLGSAALVTASAVSGRVQAAAIPEAPTMDKVVMQPPLHPTSGPDYRPVVTLNGW 64 M SRRGFLG+AALV ASAVSGRVQAA IPEAP MDKV MQPPLHPTSGPDYRPVVTLNGW Sbjct: 1 MLSRRGFLGTAALVGASAVSGRVQAANIPEAPMMDKVTMQPPLHPTSGPDYRPVVTLNGW 60 Query: 65 SLPWRMNGDWKEFHLVAEPVVREFADGMKGNLWGYNGQAPGPTIEAVEGDKVRIFVTNRL 124 SLPWRMNGDWKEFHLVAEPVVREFA+GMK NLWGYNGQ+PGPTIEAVEGDKVRIFVTN+L Sbjct: 61 SLPWRMNGDWKEFHLVAEPVVREFAEGMKANLWGYNGQSPGPTIEAVEGDKVRIFVTNKL 120 Query: 125 PEHTTVHWHGMIVPSGMDGVGGLNQPHIKPGKTFVYEFEMKHSGTFMYHPHSDEMVQMAM 184 PEHTTVHWHGMI+PSGMDGVGGL QPHI PGKTFVYEFE+KHSGTFMYHPHSDEMVQMAM Sbjct: 121 PEHTTVHWHGMILPSGMDGVGGLTQPHIPPGKTFVYEFELKHSGTFMYHPHSDEMVQMAM 180 Query: 185 GMMGMFIVHPRDPAFRPVDRDFVFIMSSYLIDPGTYLPKVNEMTDFNMWTWNSRVYPGID 244 GMMGMF+VHPRDP+FRPVDRDFVF+MS+YLIDPGTYLPKVNEMTDFNMWTWNSRV+PGID Sbjct: 181 GMMGMFVVHPRDPSFRPVDRDFVFVMSTYLIDPGTYLPKVNEMTDFNMWTWNSRVFPGID 240 Query: 245 PMPIRLGDRIRVRIGNLTMTNHPIHVHGHNFAVTCTDGGWVPVSAQYPETTTDVPVGAVR 304 P+P+RLGD++RVRIGNLTMTNHPIH+HGH+F V+CTDGGWVP SAQ+PETT DVPVGA+R Sbjct: 241 PLPVRLGDKVRVRIGNLTMTNHPIHLHGHHFGVSCTDGGWVPESAQWPETTIDVPVGAIR 300 Query: 305 AFDMLADNPGDWAFHCHKSHHTMNAMGHDMRNFIGVSRKDLAKAVGKLAPDAMVMGSTGM 364 AFD++ADNPGDWAFHCHKSHHTMNAMGHD+RN IGVS+KDLAKAVGKLAPDAMVMGSTGM Sbjct: 301 AFDVIADNPGDWAFHCHKSHHTMNAMGHDVRNLIGVSKKDLAKAVGKLAPDAMVMGSTGM 360 Query: 365 AMGNMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGLGRDDYADPGPYKYPPGTVA 424 AMG MEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREG+ RDDY+DPGPYK+P GTVA Sbjct: 361 AMGEMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGMARDDYSDPGPYKFPAGTVA 420 Query: 425 YEVEAPAAEPARQPPAAPGRK------AKP-SMKGMK 454 YEV+AP + RQ A P K KP +MKGMK Sbjct: 421 YEVDAPNGQAPRQGDARPTDKPEDKKSKKPMNMKGMK 457 >ref|YP_001220465.1| twin-arginine translocation pathway signal; putative copper resistance protein (copA) [Bradyrhizobium sp. BTAi1] gb|ABQ39793.1| Twin-arginine translocation pathway signal; putative copper resistance protein (copA) [Bradyrhizobium sp. BTAi1] Length = 455 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/455 (84%), Positives = 417/455 (91%), Gaps = 4/455 (0%) Query: 5 MFSRRGFLGSAALVTASAVSGRVQAAAIPEAPTMDKVVMQPPLHPTSGPDYRPVVTLNGW 64 M SRRGFLG+AALV+A+AV+GRVQAAAIPEAP MDKV MQPPLHPTSGPDYRPVVTLNGW Sbjct: 1 MISRRGFLGTAALVSATAVTGRVQAAAIPEAPIMDKVTMQPPLHPTSGPDYRPVVTLNGW 60 Query: 65 SLPWRMNGDWKEFHLVAEPVVREFADGMKGNLWGYNGQAPGPTIEAVEGDKVRIFVTNRL 124 SLPWRMNGDWKE+HLVAEPVVREFA+GMK LWGYNGQ+PGPTIEAVEGDKVRIFVTN+L Sbjct: 61 SLPWRMNGDWKEYHLVAEPVVREFAEGMKAFLWGYNGQSPGPTIEAVEGDKVRIFVTNKL 120 Query: 125 PEHTTVHWHGMIVPSGMDGVGGLNQPHIKPGKTFVYEFEMKHSGTFMYHPHSDEMVQMAM 184 PE TTVHWHGMIVPSGMDGVGGL+QPHIKPGKTFVYEFEMK SGTFMYHPHSDEMVQMAM Sbjct: 121 PEPTTVHWHGMIVPSGMDGVGGLSQPHIKPGKTFVYEFEMKKSGTFMYHPHSDEMVQMAM 180 Query: 185 GMMGMFIVHPRDPAFRPVDRDFVFIMSSYLIDPGTYLPKVNEMTDFNMWTWNSRVYPGID 244 GMMGMF+VHPRD AFR VDRDFVFIMSSY +DPGTY+PKV EMT+FNMW WNSRV+PGID Sbjct: 181 GMMGMFVVHPRDSAFRSVDRDFVFIMSSYDMDPGTYVPKVTEMTNFNMWAWNSRVFPGID 240 Query: 245 PMPIRLGDRIRVRIGNLTMTNHPIHVHGHNFAVTCTDGGWVPVSAQYPETTTDVPVGAVR 304 PMP+RLGDR+RVRIGNLTMTNHPIH+HGH+F+VTCTDGGWVP SAQ+PETTTDVPVGAVR Sbjct: 241 PMPVRLGDRVRVRIGNLTMTNHPIHLHGHSFSVTCTDGGWVPESAQWPETTTDVPVGAVR 300 Query: 305 AFDMLADNPGDWAFHCHKSHHTMNAMGHDMRNFIGVSRKDLAKAVGKLAPDAMVMGSTGM 364 AF+++ADNPGDWAFHCHKSHHTMNAMGHD+R IGV ++ +AKA KLAPD+M MGSTGM Sbjct: 301 AFEVVADNPGDWAFHCHKSHHTMNAMGHDLRTLIGVPKQAVAKAAKKLAPDSMAMGSTGM 360 Query: 365 AMGNMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGLGRDDYADPGPYKYPPGTVA 424 AMG MEMP PDNTLPMMTG+GQFG IEMGGMFTVMKIREGL RDDY DPGPYK+P GTVA Sbjct: 361 AMGEMEMPLPDNTLPMMTGSGQFGAIEMGGMFTVMKIREGLARDDYRDPGPYKFPAGTVA 420 Query: 425 YEVEAPAAEPARQ---PPAAP-GRKAKPSMKGMKM 455 YE++AP EPARQ PAAP K SMKGMKM Sbjct: 421 YEIDAPVTEPARQNTPAPAAPTAEKRGKSMKGMKM 455 >ref|YP_001990114.1| multicopper oxidase type 3 [Rhodopseudomonas palustris TIE-1] gb|ACE99638.1| multicopper oxidase type 3 [Rhodopseudomonas palustris TIE-1] Length = 460 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/453 (80%), Positives = 413/453 (91%), Gaps = 3/453 (0%) Query: 5 MFSRRGFLGSA-ALVTASAVSGRVQAAAIPEAPTMDKVVMQPPLHPTSGPDYRPVVTLNG 63 M SRR FLGSA AL +AS V+GRVQAA+IPEAPTMDKV QPPL+PTSGP+YRPVVTLNG Sbjct: 1 MLSRRSFLGSATALASASVVAGRVQAASIPEAPTMDKVTSQPPLYPTSGPEYRPVVTLNG 60 Query: 64 WSLPWRMNGDWKEFHLVAEPVVREFADGMKGNLWGYNGQAPGPTIEAVEGDKVRIFVTNR 123 WSLPWRMNGDWKEFHLVAEPVVREFA GM +LWGYNGQ PGPTIEAVEGDKVRIFVTN+ Sbjct: 61 WSLPWRMNGDWKEFHLVAEPVVREFAQGMNAHLWGYNGQTPGPTIEAVEGDKVRIFVTNK 120 Query: 124 LPEHTTVHWHGMIVPSGMDGVGGLNQPHIKPGKTFVYEFEMKHSGTFMYHPHSDEMVQMA 183 LPE+TTVHWHGMI+P GMDGVGGL QPHI PGKTFVYEFE+KHSGTFMYHPH+DEMVQMA Sbjct: 121 LPEYTTVHWHGMILPCGMDGVGGLTQPHINPGKTFVYEFELKHSGTFMYHPHADEMVQMA 180 Query: 184 MGMMGMFIVHPRDPAFRPVDRDFVFIMSSYLIDPGTYLPKVNEMTDFNMWTWNSRVYPGI 243 MGMMGMF+VHP+DP+FRPVDRDFVF+MSSY +DPGTY+PKV EMT+FNMW+WN+RV+PGI Sbjct: 181 MGMMGMFVVHPKDPSFRPVDRDFVFVMSSYDMDPGTYVPKVTEMTNFNMWSWNARVFPGI 240 Query: 244 DPMPIRLGDRIRVRIGNLTMTNHPIHVHGHNFAVTCTDGGWVPVSAQYPETTTDVPVGAV 303 DP+P+RLGDR+RVRIGNLTMTNHPIH+HGH+ +V+ TDGGWV SA++PETT DVPVG++ Sbjct: 241 DPLPVRLGDRVRVRIGNLTMTNHPIHLHGHSISVSGTDGGWVAESARWPETTIDVPVGSI 300 Query: 304 RAFDMLADNPGDWAFHCHKSHHTMNAMGHDMRNFIGVSRKDLAKAVGKLAPDAMVMGSTG 363 RAF+++ADNPGDWAFHCHKSHHTMN+MGHD+R IGVS+KD+AKAV +LAPD+M MGSTG Sbjct: 301 RAFEVVADNPGDWAFHCHKSHHTMNSMGHDLRTLIGVSKKDIAKAVKRLAPDSMAMGSTG 360 Query: 364 MAMGNMEMPAPDNTLPMMTGTGQFGPIEMGGMFTVMKIREGLGRDDYADPGPYKYPPGTV 423 MAMG MEMP PDNTLPMMTG+GQFGPIEMGGMFTVMKIREG+ RDDY+DPGPYK+P GTV Sbjct: 361 MAMGEMEMPLPDNTLPMMTGSGQFGPIEMGGMFTVMKIREGMARDDYSDPGPYKFPKGTV 420 Query: 424 AYEVEAPAAEPARQ--PPAAPGRKAKPSMKGMK 454 AY+VE PA EPARQ P + G + K S KGMK Sbjct: 421 AYQVETPAEEPARQDGPSKSEGTREKKSTKGMK 453