BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0036.p (490 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576732.1| cation diffusion facilitator family transporter... 647 0.0 ref|NP_769781.1| cation efflux system protein [Bradyrhizobium ja... 639 0.0 ref|YP_531726.1| cation diffusion facilitator family transporter... 622 e-176 ref|YP_317815.1| cation efflux protein [Nitrobacter winogradskyi... 610 e-172 ref|YP_487042.1| cation diffusion facilitator family transporter... 608 e-172 >ref|YP_576732.1| cation diffusion facilitator family transporter [Nitrobacter hamburgensis X14] gb|ABE62272.1| cation diffusion facilitator family transporter [Nitrobacter hamburgensis X14] Length = 460 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/457 (70%), Positives = 375/457 (82%), Gaps = 4/457 (0%) Query: 34 APSAKTSVAAISILASGSMAVAKFVVGIAIGSLALISEALHSSIDLVATIITWAVVRVSD 93 A S+KT VAA+S++AS SMA KFVVG+AIGSLALISEALHSS+DLVATI+TW VVR SD Sbjct: 5 ASSSKTRVAAVSMIASASMAAIKFVVGVAIGSLALISEALHSSVDLVATIVTWFVVRFSD 64 Query: 94 QPADAEHHYGHGKFESVSALGIIALLYVLAGGILVQAYSHLREGAPPPSISAIPFIVLVI 153 +PAD EHHYGHGK ES+SALG+IA+LYVLAGGI+VQAY+HLREGAP P++SAIPF+VLV+ Sbjct: 65 RPADDEHHYGHGKIESLSALGVIAMLYVLAGGIVVQAYAHLREGAPVPTLSAIPFVVLVV 124 Query: 154 DIGVNLWRARALHRAARDTKSQALAADALHFASDVMGSSAVIVGLVLAGFGFWWGDAAAA 213 DI VN WRARALHR A DT+SQAL ADALHFASDV+GS AVI+GL L+G G+ WGDA AA Sbjct: 125 DIAVNFWRARALHRTALDTRSQALEADALHFASDVLGSIAVIIGLTLSGLGYAWGDAGAA 184 Query: 214 IAVAVMIALLGLRMARETVETLLDRAPEGALEKATAAIKAVPGVVDVDRLRVRMVGATHF 273 I VA++I++LGLR+ R T+ETLLDRAPEGA E+A AAI+A+PG+VD++RLRVRMVG HF Sbjct: 185 IGVAILISVLGLRLGRATIETLLDRAPEGAAERAKAAIRALPGIVDIERLRVRMVGPRHF 244 Query: 274 IDASVTVPRTYPIDRVEDIKRRAQAAVAKTFGDADLTFTAVPVARDNESVRERIMVIARN 333 +D VPRTYPIDR++ IK++AQ AV+ GDADLTFTA+PVARDNES+RERIMVIARN Sbjct: 245 VDVIAEVPRTYPIDRIDAIKQQAQNAVSAALGDADLTFTAIPVARDNESIRERIMVIARN 304 Query: 334 SGLAIHHVTVQVTDTISRQADRRYRLEGDGDRRSTRRTTSPTTSSGDPRG-FGEDVEVDT 392 SGLAIHHVTV + + LE DG+ D R FG DVEVDT Sbjct: 305 SGLAIHHVTVH---DLGEKLTVSIDLEVDGEMALVDAHAIAHRLEHDIRNEFGADVEVDT 361 Query: 393 HIEPLEPELPWGTDAAPDRVETIKAALTGFADGGAIHDIHNVRVRNTDAGEIVNFHCRAR 452 HIEPLEPELP GTDA P R++ I+ L+GF GGAIHDIHNVRVR+TDAGEIVNFHCRA Sbjct: 362 HIEPLEPELPLGTDAVPARIDAIRTTLSGFTAGGAIHDIHNVRVRDTDAGEIVNFHCRAA 421 Query: 453 PSMSVIKVHESVDEIERKLRRAFPSVKRVISHAEPTR 489 PSMSV +VHE VDEIER LRRAFPSVKRVISHAEP R Sbjct: 422 PSMSVARVHEQVDEIERALRRAFPSVKRVISHAEPAR 458 >ref|NP_769781.1| cation efflux system protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48406.1| bll3141 [Bradyrhizobium japonicum USDA 110] Length = 457 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/457 (77%), Positives = 383/457 (83%), Gaps = 12/457 (2%) Query: 38 KTSVAAISILASGSMAVAKFVVGIAIGSLALISEALHSSIDLVATIITWAVVRVSDQPAD 97 KTSVAAISI ASGSMA AKFVVG+AIGSLALISEALHSS+DLVATIITWAVVRVSD+PAD Sbjct: 7 KTSVAAISIFASGSMAAAKFVVGVAIGSLALISEALHSSVDLVATIITWAVVRVSDKPAD 66 Query: 98 AEHHYGHGKFESVSALGIIALLYVLAGGILVQAYSHLREGAPPPSISAIPFIVLVIDIGV 157 EHHYGHGK ES+SALG+ ALLYVLAGGILV+AYS LREG PPP+ISAIPF+VLVIDI V Sbjct: 67 DEHHYGHGKLESISALGVTALLYVLAGGILVEAYSRLREGTPPPTISAIPFVVLVIDIVV 126 Query: 158 NLWRARALHRAARDTKSQALAADALHFASDVMGSSAVIVGLVLAGFGFWWGDAAAAIAVA 217 NLWRARALHRAAR+T+SQALAADALHFASDVMGS AVIVGL+LA GFWWGDAAAA AVA Sbjct: 127 NLWRARALHRAARETRSQALAADALHFASDVMGSFAVIVGLILAALGFWWGDAAAAAAVA 186 Query: 218 VMIALLGLRMARETVETLLDRAPEGALEKATAAIKAVPGVVDVDRLRVRMVGATHFIDAS 277 VMIA LGLRMA TV+TL+DRAPEGA EKATAAI++VPGV+ V+RLRVRMVGAT FID Sbjct: 187 VMIAALGLRMAGSTVQTLVDRAPEGAQEKATAAIRSVPGVIGVERLRVRMVGATTFIDTI 246 Query: 278 VTVPRTYPIDRVEDIKRRAQAAVAKTFGDADLTFTAVPVARDNESVRERIMVIARNSGLA 337 VPRTYPIDRVE+IKR+ QAAV K FGDADLTFT VPVARDNE+VR+RIMVIARNS LA Sbjct: 247 AKVPRTYPIDRVEEIKRKVQAAVDKAFGDADLTFTPVPVARDNETVRDRIMVIARNSSLA 306 Query: 338 IHHVTV-----QVTDTISRQADRRYRLEGDGDRRSTRRTTSPTTSSGDPRGFGEDVEVDT 392 +HHVTV ++ +I + D RL+ D + T FG DVEVD Sbjct: 307 VHHVTVHDLGAKLIVSIDLEVDAGMRLDAAHD-------VANTLERNIQEEFGADVEVDV 359 Query: 393 HIEPLEPELPWGTDAAPDRVETIKAALTGFADGGAIHDIHNVRVRNTDAGEIVNFHCRAR 452 HIEPLEPELP+G DAAP+RV+TI AAL FA G IHDIHNVRVRNTDAGEIVNFHCRA Sbjct: 360 HIEPLEPELPFGVDAAPERVQTIAAALAEFAGEGEIHDIHNVRVRNTDAGEIVNFHCRAT 419 Query: 453 PSMSVIKVHESVDEIERKLRRAFPSVKRVISHAEPTR 489 PSMSVIKVHE VD IER LRRAFPSVKRVISHAEP R Sbjct: 420 PSMSVIKVHEHVDAIERALRRAFPSVKRVISHAEPPR 456 >ref|YP_531726.1| cation diffusion facilitator family transporter [Rhodopseudomonas palustris BisB18] gb|ABD87407.1| cation diffusion facilitator family transporter [Rhodopseudomonas palustris BisB18] Length = 460 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 325/467 (69%), Positives = 370/467 (79%), Gaps = 20/467 (4%) Query: 33 SAPSAKTSVAAISILASGSMAVAKFVVGIAIGSLALISEALHSSIDLVATIITWAVVRVS 92 S + K VAAIS+LAS +MA AKF VGIAIGSLALISEALHSS+DLVAT+ITW VVR+S Sbjct: 4 SVANVKARVAAISVLASATMAAAKFTVGIAIGSLALISEALHSSVDLVATLITWVVVRMS 63 Query: 93 DQPADAEHHYGHGKFESVSALGIIALLYVLAGGILVQAYSHLREGAPPPSISAIPFIVLV 152 D+PAD HHYGHGK ES+SALG+IA+LYVLAGGI+V+AYS LREGAPPP +SA+PF+VL+ Sbjct: 64 DRPADDAHHYGHGKIESLSALGVIAMLYVLAGGIVVEAYSRLREGAPPPVLSALPFVVLL 123 Query: 153 IDIGVNLWRARALHRAARDTKSQALAADALHFASDVMGSSAVIVGLVLAGFGFWWGDAAA 212 DI VNLWRARALH+ A TKSQALAADALHFASDV+GS AVIVGL L+G GF WGDA A Sbjct: 124 ADIVVNLWRARALHKTAVATKSQALAADALHFASDVLGSFAVIVGLALSGLGFPWGDAGA 183 Query: 213 AIAVAVMIALLGLRMARETVETLLDRAPEGALEKATAAIKAVPGVVDVDRLRVRMVGATH 272 AI VAVMI+LLG+R+ R T++TLLDRAP+G +KA+ AI V GVV ++RLRVRMVG T+ Sbjct: 184 AIGVAVMISLLGVRLGRSTIQTLLDRAPDGVSDKASEAISGVAGVVGIERLRVRMVGPTY 243 Query: 273 FIDASVTVPRTYPIDRVEDIKRRAQAAVAKTFGDADLTFTAVPVARDNESVRERIMVIAR 332 FIDA V VPRTYPIDR+EDIKR+AQAAV+ DADLTFTAVPVARDNESVRERIMVIAR Sbjct: 244 FIDAIVQVPRTYPIDRIEDIKRKAQAAVSGALDDADLTFTAVPVARDNESVRERIMVIAR 303 Query: 333 NSGLAIHHVTVQVTDTISRQADRRYRLEGDGDRRSTRRTTSPTTSSGD---------PRG 383 NSGLAIHHVTV + + LE DG+ P + D Sbjct: 304 NSGLAIHHVTVH---DLGEKLTVSIDLEVDGNM--------PLIEAHDIAHQLEHHIVDE 352 Query: 384 FGEDVEVDTHIEPLEPELPWGTDAAPDRVETIKAALTGFADGGAIHDIHNVRVRNTDAGE 443 FG DVEVDTHIEPLEPELP G D++ RVE I+AAL GFA G I+DIH+VRVR+TDAGE Sbjct: 353 FGTDVEVDTHIEPLEPELPHGADSSAARVEEIRAALAGFASDGVINDIHSVRVRDTDAGE 412 Query: 444 IVNFHCRARPSMSVIKVHESVDEIERKLRRAFPSVKRVISHAEPTRA 490 +VNFHC A +MSVI VHE VDEIERKLRRAFPSVKRVISHAEP A Sbjct: 413 VVNFHCHAAAAMSVIAVHEHVDEIERKLRRAFPSVKRVISHAEPPNA 459 >ref|YP_317815.1| cation efflux protein [Nitrobacter winogradskyi Nb-255] gb|ABA04463.1| Cation efflux protein [Nitrobacter winogradskyi Nb-255] Length = 460 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 337/457 (73%), Positives = 377/457 (82%), Gaps = 4/457 (0%) Query: 34 APSAKTSVAAISILASGSMAVAKFVVGIAIGSLALISEALHSSIDLVATIITWAVVRVSD 93 A +KT VAAISI+AS SMA K VVG+AIGSLALISEALHSSIDLVATI+TW VVR+SD Sbjct: 5 AARSKTKVAAISIIASASMAAIKLVVGVAIGSLALISEALHSSIDLVATIVTWIVVRISD 64 Query: 94 QPADAEHHYGHGKFESVSALGIIALLYVLAGGILVQAYSHLREGAPPPSISAIPFIVLVI 153 +PADAEHHYGHGK ES+SALGIIA+LYVLAGGI+VQAYSHLREGA PP++SAIPFIVLV Sbjct: 65 RPADAEHHYGHGKIESLSALGIIAMLYVLAGGIVVQAYSHLREGAAPPTLSAIPFIVLVT 124 Query: 154 DIGVNLWRARALHRAARDTKSQALAADALHFASDVMGSSAVIVGLVLAGFGFWWGDAAAA 213 DI VN WRARALHRAA DT+SQAL ADALHFASDV+GS AVI+GL L+G G+ WGDAAAA Sbjct: 125 DIIVNAWRARALHRAALDTRSQALEADALHFASDVLGSVAVIIGLTLSGLGYAWGDAAAA 184 Query: 214 IAVAVMIALLGLRMARETVETLLDRAPEGALEKATAAIKAVPGVVDVDRLRVRMVGATHF 273 I VA++I+LLGLR+ R TVETLLDRAPEGA E+A AAI+A+P VVD+ RLRVRMVG HF Sbjct: 185 IGVAILISLLGLRLGRATVETLLDRAPEGAAERAGAAIRALPDVVDLKRLRVRMVGPRHF 244 Query: 274 IDASVTVPRTYPIDRVEDIKRRAQAAVAKTFGDADLTFTAVPVARDNESVRERIMVIARN 333 +D V VPRTYPIDR++ IK++AQ AV+ GDADLTFTA+PVARDNESVRERIMVIARN Sbjct: 245 VDVIVEVPRTYPIDRIDAIKQQAQDAVSAALGDADLTFTAIPVARDNESVRERIMVIARN 304 Query: 334 SGLAIHHVTVQVTDTISRQADRRYRLEGDGDRRSTRRTTSPTTSSGDPRG-FGEDVEVDT 392 GLAIHHVTV + + LE DG+ D R FG DVEVDT Sbjct: 305 LGLAIHHVTVH---DLGAKLTVSIDLEVDGEMALVDAHAIAHRLEHDIRHEFGADVEVDT 361 Query: 393 HIEPLEPELPWGTDAAPDRVETIKAALTGFADGGAIHDIHNVRVRNTDAGEIVNFHCRAR 452 HIEPLEPELP GTDAAP R+ I+ AL+GFA GGAIHDIHNVRVR+T+AGEIVNFHCRA Sbjct: 362 HIEPLEPELPLGTDAAPGRIHAIRTALSGFAAGGAIHDIHNVRVRDTEAGEIVNFHCRAA 421 Query: 453 PSMSVIKVHESVDEIERKLRRAFPSVKRVISHAEPTR 489 PSMSV +VHESVDEIER LRRAFPSVKRVISHAEP R Sbjct: 422 PSMSVARVHESVDEIERALRRAFPSVKRVISHAEPPR 458 >ref|YP_487042.1| cation diffusion facilitator family transporter [Rhodopseudomonas palustris HaA2] gb|ABD08131.1| cation diffusion facilitator family transporter [Rhodopseudomonas palustris HaA2] Length = 478 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 324/466 (69%), Positives = 365/466 (78%), Gaps = 8/466 (1%) Query: 26 PMSSSKTSAPSAKTSVAAISILASGSMAVAKFVVGIAIGSLALISEALHSSIDLVATIIT 85 PMS+ S K+ VAA+S+LAS SMA AKF VGIAIGSLALISEALHSSIDLVATIIT Sbjct: 19 PMSNFA----STKSRVAAVSVLASASMAAAKFAVGIAIGSLALISEALHSSIDLVATIIT 74 Query: 86 WAVVRVSDQPADAEHHYGHGKFESVSALGIIALLYVLAGGILVQAYSHLREGAPPPSISA 145 W VVRVSD+PAD HHYGHGK ES+SALG+IALLYVLAGGILV+A S LREGAPPP+ S Sbjct: 75 WFVVRVSDRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEATSRLREGAPPPAFSL 134 Query: 146 IPFIVLVIDIGVNLWRARALHRAARDTKSQALAADALHFASDVMGSSAVIVGLVLAGFGF 205 F +L +DI VN WRA ALHR A TKSQALAADALHFASDV+GS AVI GL L+ GF Sbjct: 135 WAFGILGVDILVNSWRAWALHRTAVATKSQALAADALHFASDVLGSFAVIAGLSLSALGF 194 Query: 206 WWGDAAAAIAVAVMIALLGLRMARETVETLLDRAPEGALEKATAAIKAVPGVVDVDRLRV 265 WGDAAAAI VAVMI++LGLR+ R T++TLLDRAPEG +KA I AVPGVV ++RLR Sbjct: 195 AWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVISAVPGVVGIERLRT 254 Query: 266 RMVGATHFIDASVTVPRTYPIDRVEDIKRRAQAAVAKTFGDADLTFTAVPVARDNESVRE 325 RMVG THFIDA V VPRTYPIDR+++IKRRA A+ FGD+DLTFTA+PVARDNE+VRE Sbjct: 255 RMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTFTAIPVARDNETVRE 314 Query: 326 RIMVIARNSGLAIHHVTVQVTDTISRQADRRYRLEGDGDRRSTRRTTSPTTSSGDPR-GF 384 RIMVIARNSGLA+HHVTV + + LE DGD R F Sbjct: 315 RIMVIARNSGLAVHHVTVH---DLGCKITVSIDLEVDGDMPLIEAHDIAHELERHIRDDF 371 Query: 385 GEDVEVDTHIEPLEPELPWGTDAAPDRVETIKAALTGFADGGAIHDIHNVRVRNTDAGEI 444 G DVEVDTHIEPLEPE+P G +AAP+RVE I+AAL GFA GAIHDIH+VRVR+T+AGEI Sbjct: 372 GTDVEVDTHIEPLEPEMPHGYEAAPERVEEIRAALIGFAKNGAIHDIHSVRVRDTEAGEI 431 Query: 445 VNFHCRARPSMSVIKVHESVDEIERKLRRAFPSVKRVISHAEPTRA 490 VNFHC A PS+SVI VH+ VDEIER +RRAFPSVKRVISHAEP A Sbjct: 432 VNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNA 477