BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0020.p (527 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769770.1| DO-like serine protease [Bradyrhizobium japonic... 887 0.0 ref|YP_531719.1| peptidase S1C, Do [Rhodopseudomonas palustris B... 858 0.0 ref|YP_001204790.1| putative serine protease do-like [Bradyrhizo... 855 0.0 ref|YP_001239101.1| putative serine protease do-like [Bradyrhizo... 853 0.0 ref|YP_569147.1| peptidase S1C, Do [Rhodopseudomonas palustris B... 817 0.0 >ref|NP_769770.1| DO-like serine protease [Bradyrhizobium japonicum USDA 110] dbj|BAC48395.1| serine protease DO-like precursor [Bradyrhizobium japonicum USDA 110] Length = 525 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/528 (86%), Positives = 488/528 (92%), Gaps = 4/528 (0%) Query: 1 MTDRPDLSTLPSYKAPKRSLFSARKLALMASVVAGLGAATYGFSPSHNPADLFTTPAHAQ 60 MT+RPDLS LPSY+ P+RS+FSARK+ALMASVVAG GAA YGFSPS +PADLF++PAHAQ Sbjct: 1 MTERPDLSNLPSYRQPRRSVFSARKIALMASVVAGFGAAVYGFSPSVSPADLFSSPAHAQ 60 Query: 61 VNNEVKKVQQPVGFADIVERVKPSVISVKVNIREKVAKDDSNNDDS-PFQPGSPMERFFR 119 VNNEV+KV++PVGFADIVERVKPSVISVKVNI+EK A +D +D S PFQPGSPMERFFR Sbjct: 61 VNNEVRKVERPVGFADIVERVKPSVISVKVNIKEKTASNDDGDDSSSPFQPGSPMERFFR 120 Query: 120 RFGGPDGLPPGLRGGPRGGGVVTGQGSGFFISADGFAVTNNHVVDGADKVEVTTDDGKTY 179 RFGGPDG+P G++GG G VV GQGSGFFISADGFAVTNNHVVDGADKVEVTTDDGKTY Sbjct: 121 RFGGPDGIP-GMKGGR--GRVVQGQGSGFFISADGFAVTNNHVVDGADKVEVTTDDGKTY 177 Query: 180 SAKVIGTDPRTDLALIKVEGGSNFQFAKLSDSKPRIGDWVLAVGNPFGLGGTVTAGIVSA 239 +AKVIGTD RTDLALIKVEGGSNF FAKL+D KPRIGDWVLAVGNPFGLGGTVTAGIVSA Sbjct: 178 TAKVIGTDQRTDLALIKVEGGSNFPFAKLADGKPRIGDWVLAVGNPFGLGGTVTAGIVSA 237 Query: 240 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVSGEVMGVNTAIYSPSGGSVGIAFSIPAQ 299 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAF+ GEVMGVNTAIYSPSGGSVGIAFSIPA Sbjct: 238 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFNTDGEVMGVNTAIYSPSGGSVGIAFSIPAN 297 Query: 300 TVKSVVAQLKDKGAVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAAKAGIE 359 TVK+VVAQLKDKG+VSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAAKAGIE Sbjct: 298 TVKTVVAQLKDKGSVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAAKAGIE 357 Query: 360 SGDVITSVNGEPVKDARELARTIGGLAPGNAVKLNVLHKGQDKTVNLTLGQLPNNLEAKA 419 SGDVITSVNGE VKDARELARTIGG+APG VKLNVLHKGQDK VNLTLGQLPN +EAKA Sbjct: 358 SGDVITSVNGESVKDARELARTIGGMAPGAIVKLNVLHKGQDKVVNLTLGQLPNTVEAKA 417 Query: 420 DTDKSDKGNSSRGTDVPKLGLTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKEGDVIL 479 DTD +++GTDVPKLG+TVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKEGDVIL Sbjct: 418 DTDNDSGKGATKGTDVPKLGMTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKEGDVIL 477 Query: 480 EVAGKSVGTAGEVRDAITAARNDSKNSVLMRVKSGGSSRFVAVPLAKG 527 EV GKSV TAG+VR+AI AR D+KNSVLMRVKSGG SRFVA+PLAKG Sbjct: 478 EVGGKSVSTAGDVREAINTARTDNKNSVLMRVKSGGQSRFVAIPLAKG 525 >ref|YP_531719.1| peptidase S1C, Do [Rhodopseudomonas palustris BisB18] gb|ABD87400.1| Peptidase S1C, Do [Rhodopseudomonas palustris BisB18] Length = 528 Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/528 (82%), Positives = 486/528 (92%), Gaps = 1/528 (0%) Query: 1 MTDRP-DLSTLPSYKAPKRSLFSARKLALMASVVAGLGAATYGFSPSHNPADLFTTPAHA 59 MTDRP +LS+LPSY+ +RSLFSARK ALMASVVAGLGA YG SP+ + ++ +T AHA Sbjct: 1 MTDRPTELSSLPSYRPLRRSLFSARKFALMASVVAGLGAGLYGLSPAPDHFNVLSTAAHA 60 Query: 60 QVNNEVKKVQQPVGFADIVERVKPSVISVKVNIREKVAKDDSNNDDSPFQPGSPMERFFR 119 QVNNEV+KV QPVGFADIVERVKPSVISVKVNI EKVAK+D + +DSPFQPGSPMERFFR Sbjct: 61 QVNNEVRKVAQPVGFADIVERVKPSVISVKVNINEKVAKNDDSAEDSPFQPGSPMERFFR 120 Query: 120 RFGGPDGLPPGLRGGPRGGGVVTGQGSGFFISADGFAVTNNHVVDGADKVEVTTDDGKTY 179 RFGGPDG+PPGLRGG G G VTGQGSGFFIS DG+AVTNNHVVDGADKVEVTTDDG+T+ Sbjct: 121 RFGGPDGMPPGLRGGRGGRGAVTGQGSGFFISDDGYAVTNNHVVDGADKVEVTTDDGRTF 180 Query: 180 SAKVIGTDPRTDLALIKVEGGSNFQFAKLSDSKPRIGDWVLAVGNPFGLGGTVTAGIVSA 239 AKVIGTDPRTDLALIKVEGG+NF FAKL++ KPRIGDWVLAVGNPFGLGGTVTAGIVSA Sbjct: 181 KAKVIGTDPRTDLALIKVEGGNNFPFAKLAEGKPRIGDWVLAVGNPFGLGGTVTAGIVSA 240 Query: 240 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVSGEVMGVNTAIYSPSGGSVGIAFSIPAQ 299 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFD SGEVMGVNTAIYSPSGGSVGIAFSIPA Sbjct: 241 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDTSGEVMGVNTAIYSPSGGSVGIAFSIPAS 300 Query: 300 TVKSVVAQLKDKGAVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAAKAGIE 359 TVK+VVAQLKDKG+VSRGWIGVQIQPVT +IADSLG+KKA+GALVAEPQA+GPAAKAGI+ Sbjct: 301 TVKTVVAQLKDKGSVSRGWIGVQIQPVTQEIADSLGLKKADGALVAEPQADGPAAKAGIQ 360 Query: 360 SGDVITSVNGEPVKDARELARTIGGLAPGNAVKLNVLHKGQDKTVNLTLGQLPNNLEAKA 419 SGDVIT+VN PVKDARELARTIGG APGN+VKLNV+HKGQDK VNLTLGQLPN +EAKA Sbjct: 361 SGDVITAVNDTPVKDARELARTIGGFAPGNSVKLNVIHKGQDKVVNLTLGQLPNTIEAKA 420 Query: 420 DTDKSDKGNSSRGTDVPKLGLTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKEGDVIL 479 D D+ D G++ RG+D+P+LGLT+APA +VAGAGK+GVVVTEVDPKSAAAERGFKEGDVIL Sbjct: 421 DVDRGDHGDAKRGSDIPRLGLTLAPAGTVAGAGKDGVVVTEVDPKSAAAERGFKEGDVIL 480 Query: 480 EVAGKSVGTAGEVRDAITAARNDSKNSVLMRVKSGGSSRFVAVPLAKG 527 EVAGKSV + EVR+A+ +A+ ++KNSVL+RV+SGGSSRFVAVPLAKG Sbjct: 481 EVAGKSVASPTEVREALASAKTENKNSVLIRVRSGGSSRFVAVPLAKG 528 >ref|YP_001204790.1| putative serine protease do-like [Bradyrhizobium sp. ORS 278] emb|CAL76553.1| Putative serine protease do-like precursor [Bradyrhizobium sp. ORS 278] Length = 528 Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/533 (83%), Positives = 478/533 (89%), Gaps = 11/533 (2%) Query: 1 MTDRP-DLSTLPSYKAPKRSLFSARKLALMASVVAGLGAATYGFSPSHNPADLFTTPAHA 59 MTDRP DLS+LPSY+ P+R LFSARK ALMASVVAGLG A YG SP P DLF+T AHA Sbjct: 1 MTDRPTDLSSLPSYQKPRRGLFSARKFALMASVVAGLGVAAYGLSPQGAPLDLFSTSAHA 60 Query: 60 QVNNEVKKVQQPVGFADIVERVKPSVISVKVNIREKVAKDDSNNDDSPFQPGSPMERFFR 119 QV NEV KV +PVGFADIVERVKPSVISVKVNI EKVAK+D N+DD+PFQPGSPMERFFR Sbjct: 61 QVANEVSKVARPVGFADIVERVKPSVISVKVNIAEKVAKND-NDDDTPFQPGSPMERFFR 119 Query: 120 RFGGPDGLPPGLRGGPRGGG-----VVTGQGSGFFISADGFAVTNNHVVDGADKVEVTTD 174 RFGG +G+P G P GG VTGQGSGFFISADG+AVTNNHVVDGADKVEVTTD Sbjct: 120 RFGGENGIP----GMPGRGGRGGGRAVTGQGSGFFISADGYAVTNNHVVDGADKVEVTTD 175 Query: 175 DGKTYSAKVIGTDPRTDLALIKVEGGSNFQFAKLSDSKPRIGDWVLAVGNPFGLGGTVTA 234 DGKTYSAKVIGTD RTDLALIKVEGGSNF FAKL+D KPRIGDWVLAVGNPFGLGGTVTA Sbjct: 176 DGKTYSAKVIGTDQRTDLALIKVEGGSNFPFAKLADGKPRIGDWVLAVGNPFGLGGTVTA 235 Query: 235 GIVSASGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVSGEVMGVNTAIYSPSGGSVGIAF 294 GIVSA GRDIGNGPYDDFIQIDAPVNKGNSGGPAFDV G V+GVNTAIYSPSGGSVGIAF Sbjct: 236 GIVSAVGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVDGNVVGVNTAIYSPSGGSVGIAF 295 Query: 295 SIPAQTVKSVVAQLKDKGAVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAA 354 SIPA TVKSV+AQLKD G+VSRGWIGVQIQPVT DIADSLGMKKAEGALVAEPQANGPAA Sbjct: 296 SIPASTVKSVIAQLKDNGSVSRGWIGVQIQPVTQDIADSLGMKKAEGALVAEPQANGPAA 355 Query: 355 KAGIESGDVITSVNGEPVKDARELARTIGGLAPGNAVKLNVLHKGQDKTVNLTLGQLPNN 414 KAGI SGDVIT+VNG+PVKDARELARTIGG+APG AVKLNVL KGQ+KTVNLTLG+LPN Sbjct: 356 KAGIVSGDVITAVNGQPVKDARELARTIGGIAPGAAVKLNVLSKGQEKTVNLTLGKLPNT 415 Query: 415 LEAKADTDKSDKGNSSRGTDVPKLGLTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKE 474 +EAKAD D D + +RG DVPKLG+TVAPA+SVAGAGK+GVVVTEVDPKSAAA+RGFKE Sbjct: 416 VEAKADNDNGDNSSPTRGADVPKLGMTVAPASSVAGAGKDGVVVTEVDPKSAAADRGFKE 475 Query: 475 GDVILEVAGKSVGTAGEVRDAITAARNDSKNSVLMRVKSGGSSRFVAVPLAKG 527 GDVILEVAGKSV +AG+VR+AI AA+ D+KNSVLMRVKSGG SRFVAVPLAKG Sbjct: 476 GDVILEVAGKSVTSAGDVREAINAAKADNKNSVLMRVKSGGQSRFVAVPLAKG 528 >ref|YP_001239101.1| putative serine protease do-like [Bradyrhizobium sp. BTAi1] gb|ABQ35195.1| Putative serine protease do-like precursor [Bradyrhizobium sp. BTAi1] Length = 527 Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/533 (84%), Positives = 478/533 (89%), Gaps = 12/533 (2%) Query: 1 MTDRP-DLSTLPSYKAPKRSLFSARKLALMASVVAGLGAATYGFSPSHNPADLFTTPAHA 59 MTDRP DLS+LPSY+ P R LFSARK ALMASVVAGLG A YG SP P DLF+T AHA Sbjct: 1 MTDRPTDLSSLPSYRQPWRGLFSARKFALMASVVAGLGVAAYGLSPQGAPLDLFSTSAHA 60 Query: 60 QVNNEVKKVQQPVGFADIVERVKPSVISVKVNIREKVAKDDSNNDDSPFQPGSPMERFFR 119 QV NEV KV +PVGFADIVERVKPSVISVKVNI EKVAK+DS+ DD+PFQPGSPMERFFR Sbjct: 61 QVANEVSKVARPVGFADIVERVKPSVISVKVNIAEKVAKNDSD-DDTPFQPGSPMERFFR 119 Query: 120 RFGGPDGLPPGLRGGPRGGG-----VVTGQGSGFFISADGFAVTNNHVVDGADKVEVTTD 174 RFGG +G+P G P GG VTGQGSGFFISADG+AVTNNHVVDGADKVEVTTD Sbjct: 120 RFGGENGIP----GMPGRGGRGGGRAVTGQGSGFFISADGYAVTNNHVVDGADKVEVTTD 175 Query: 175 DGKTYSAKVIGTDPRTDLALIKVEGGSNFQFAKLSDSKPRIGDWVLAVGNPFGLGGTVTA 234 DGKTYSAKVIGTD RTDLALIKVEGGSNF FAKL+D KPRIGDWVLAVGNPFGLGGTVTA Sbjct: 176 DGKTYSAKVIGTDQRTDLALIKVEGGSNFPFAKLADGKPRIGDWVLAVGNPFGLGGTVTA 235 Query: 235 GIVSASGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVSGEVMGVNTAIYSPSGGSVGIAF 294 GIVSA GRDIGNGPYDDFIQIDAPVNKGNSGGPAFDV G V+GVNTAIYSPSGGSVGIAF Sbjct: 236 GIVSAVGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVDGNVVGVNTAIYSPSGGSVGIAF 295 Query: 295 SIPAQTVKSVVAQLKDKGAVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAA 354 SIPA TVKSV+AQLKD G+VSRGWIGVQIQPVT DIADSLGMKKAEGALVAEPQA+GPAA Sbjct: 296 SIPASTVKSVIAQLKDNGSVSRGWIGVQIQPVTQDIADSLGMKKAEGALVAEPQADGPAA 355 Query: 355 KAGIESGDVITSVNGEPVKDARELARTIGGLAPGNAVKLNVLHKGQDKTVNLTLGQLPNN 414 KAGI SGDVITSVNGEPVKDARELARTIGGLAPG +VKLNVL KGQ+KT++LTLG+LPN Sbjct: 356 KAGIRSGDVITSVNGEPVKDARELARTIGGLAPGASVKLNVLQKGQEKTISLTLGKLPNT 415 Query: 415 LEAKADTDKSDKGNSSRGTDVPKLGLTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKE 474 +EAKADT D + +RG DVPKLG+TVAPA+SVAGAGKEGVVVTEVDPKSAAA+RGFKE Sbjct: 416 IEAKADT-GGDNSSPTRGADVPKLGMTVAPASSVAGAGKEGVVVTEVDPKSAAADRGFKE 474 Query: 475 GDVILEVAGKSVGTAGEVRDAITAARNDSKNSVLMRVKSGGSSRFVAVPLAKG 527 GDVILEVAGKSV +AG+VR+AI AARND+KNSVLMRVKSGG SRFVAVPLAKG Sbjct: 475 GDVILEVAGKSVTSAGDVREAINAARNDNKNSVLMRVKSGGQSRFVAVPLAKG 527 >ref|YP_569147.1| peptidase S1C, Do [Rhodopseudomonas palustris BisB5] gb|ABE39246.1| Peptidase S1C, Do [Rhodopseudomonas palustris BisB5] Length = 526 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/530 (79%), Positives = 469/530 (88%), Gaps = 7/530 (1%) Query: 1 MTDR-PDLSTLPSYKAPKRSLFSARKLALMASVVAGLGAATYGFSPSHNPADLFTTPAHA 59 MTDR DL + PS + +RSL SARK ALMASVVAGLGA +G S + P DLF+TPAHA Sbjct: 1 MTDRNTDLPSQPSRQPDRRSLLSARKFALMASVVAGLGAGAFGLSQTSTPVDLFSTPAHA 60 Query: 60 QVNNEVKKVQQPVGFADIVERVKPSVISVKVNIREKVAKDDSNNDDSPFQPGSPMERFFR 119 QV N+V + QQPVGFADIVE+VKPSVISVKVNI EK AK++ +DSPFQPGSPMERFFR Sbjct: 61 QVGNKVNQAQQPVGFADIVEKVKPSVISVKVNIAEKTAKNEDRAEDSPFQPGSPMERFFR 120 Query: 120 RFGGPDGLPPGLRGGPRGGGVVTGQGSGFFISADGFAVTNNHVVDGADKVEVTTDDGKTY 179 RFGG +PPG+RG RGGG +TGQGSGFFISADG+AVTNNHVVDGADKVEVTTDDGKTY Sbjct: 121 RFGGE--MPPGMRGH-RGGGTMTGQGSGFFISADGYAVTNNHVVDGADKVEVTTDDGKTY 177 Query: 180 SAKVIGTDPRTDLALIKVEGGSNFQFAKLSDSKPRIGDWVLAVGNPFGLGGTVTAGIVSA 239 AKVIGTD RTDLALIK EG ++F FAKLS+ KPRIGDWVLAVGNPFGLGGTVTAGIVSA Sbjct: 178 KAKVIGTDQRTDLALIKAEGRTDFPFAKLSEGKPRIGDWVLAVGNPFGLGGTVTAGIVSA 237 Query: 240 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDVSGEVMGVNTAIYSPSGGSVGIAFSIPAQ 299 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFD +GEVMGVNTAIYSPSGGSVGIAFSIPA Sbjct: 238 SGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDTNGEVMGVNTAIYSPSGGSVGIAFSIPAS 297 Query: 300 TVKSVVAQLKDKGAVSRGWIGVQIQPVTSDIADSLGMKKAEGALVAEPQANGPAAKAGIE 359 TVK+VV QLKDKG+VSRGWIGVQIQPVT +IADSLG+KK +GALVAEPQ NGPAAKAGIE Sbjct: 298 TVKTVVQQLKDKGSVSRGWIGVQIQPVTPEIADSLGLKKPDGALVAEPQPNGPAAKAGIE 357 Query: 360 SGDVITSVNGEPVKDARELARTIGGLAPGNAVKLNVLHKGQDKTVNLTLGQLPNNLEAKA 419 SGDVIT+VNG PVKDARELARTIGG APGN VKL V+HKG D+ +NLTLGQLPN +EAK Sbjct: 358 SGDVITAVNGTPVKDARELARTIGGFAPGNTVKLTVVHKGADRELNLTLGQLPNQVEAKV 417 Query: 420 DTDKSDKGN-SSRGTDVPKLGLTVAPANSVAGAGKEGVVVTEVDPKSAAAERGFKEGDVI 478 + D D GN SSRGT+VP+LGLTVAPA+SVAGAGK+GVVVT+VDPKSAAA+RGFKEGDVI Sbjct: 418 N-DGGDNGNSSSRGTEVPRLGLTVAPASSVAGAGKDGVVVTDVDPKSAAADRGFKEGDVI 476 Query: 479 LEVAGKSVGTAGEVRDAITAARNDSKNSVLMRVKSGGSSRFVAVPL-AKG 527 LEVAGK+V + G+VR+AI A+ D+KNSVL+RV+SGGSSRFVAVP+ AKG Sbjct: 477 LEVAGKNVASPGDVREAINTAKADNKNSVLIRVRSGGSSRFVAVPISAKG 526