BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0016.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239097.1| cytochrome c-type biogenesis protein CcmE [B... 259 8e-68 ref|YP_001204783.1| cytochrome c-type biogenesis protein CcmE [B... 259 8e-68 ref|YP_317806.1| cytochrome c-type biogenesis protein CcmE [Nitr... 253 6e-66 ref|ZP_01046350.1| CcmE/CycJ protein [Nitrobacter sp. Nb-311A] >... 251 3e-65 ref|YP_576720.1| cytochrome c-type biogenesis protein CcmE [Nitr... 250 5e-65 >ref|YP_001239097.1| cytochrome c-type biogenesis protein CcmE [Bradyrhizobium sp. BTAi1] sp|A5EG97.1|CCME_BRASB RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE gb|ABQ35191.1| Cytochrome c-type biogenesis protein cycJ [Bradyrhizobium sp. BTAi1] Length = 170 Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 126/146 (86%), Positives = 134/146 (91%) Query: 1 LTLIGCALVVLAIAAGLVLNALRDSIVFFSTPSMVAEKHLGPGKRFRLGGLVQPGSLNRG 60 LT+IG AL VLA+AAGLVLNALRDSIVFFSTP+MVAEKH+GPGKRFRLGGLVQPGSL RG Sbjct: 8 LTIIGGALFVLAVAAGLVLNALRDSIVFFSTPTMVAEKHIGPGKRFRLGGLVQPGSLKRG 67 Query: 61 DNLAVTFTVADGGATLPVAYKGILPDLFREGQGVVAEGALDASGVFRADTVLAKHDETYM 120 D+LAVTF VADGGA LPVAYKGILPDLFREGQGVVAEGALDA+GVF+ADTVLAKHDETYM Sbjct: 68 DDLAVTFEVADGGAKLPVAYKGILPDLFREGQGVVAEGALDAAGVFKADTVLAKHDETYM 127 Query: 121 PKDVADALKKQGHWKDDYGAKSGNTP 146 PK+VAD LKKQGHWKDDYG P Sbjct: 128 PKEVADTLKKQGHWKDDYGKPQAAKP 153 >ref|YP_001204783.1| cytochrome c-type biogenesis protein CcmE [Bradyrhizobium sp. ORS 278] sp|A4YRM0.1|CCME_BRASO RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE emb|CAL76546.1| Cytochrome c-type biogenesis protein cycJ [Bradyrhizobium sp. ORS 278] Length = 171 Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 127/155 (81%), Positives = 137/155 (88%) Query: 1 LTLIGCALVVLAIAAGLVLNALRDSIVFFSTPSMVAEKHLGPGKRFRLGGLVQPGSLNRG 60 LT+IG AL VLA+AAGLVLNALRDSIVFFSTP+MVAEKH+ PGKRFRLGGLVQPGSL RG Sbjct: 8 LTIIGGALFVLAVAAGLVLNALRDSIVFFSTPTMVAEKHVAPGKRFRLGGLVQPGSLKRG 67 Query: 61 DNLAVTFTVADGGATLPVAYKGILPDLFREGQGVVAEGALDASGVFRADTVLAKHDETYM 120 D+LAVTF VADGGA LPVAYKGILPDLFREGQGVVAEGALDASGVF+ADTVLAKHDETYM Sbjct: 68 DDLAVTFEVADGGAKLPVAYKGILPDLFREGQGVVAEGALDASGVFKADTVLAKHDETYM 127 Query: 121 PKDVADALKKQGHWKDDYGAKSGNTPSASAAPTQG 155 PK+VAD LKKQGHWKDDYG G + + +G Sbjct: 128 PKEVADTLKKQGHWKDDYGKPQGAAKPGAVSMREG 162 >ref|YP_317806.1| cytochrome c-type biogenesis protein CcmE [Nitrobacter winogradskyi Nb-255] sp|Q3STD7.1|CCME_NITWN RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE gb|ABA04454.1| CcmE/CycJ protein [Nitrobacter winogradskyi Nb-255] Length = 162 Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 123/149 (82%), Positives = 135/149 (90%) Query: 1 LTLIGCALVVLAIAAGLVLNALRDSIVFFSTPSMVAEKHLGPGKRFRLGGLVQPGSLNRG 60 LT+IG ALVVL IAA LVLNALRDSIVFFSTP MV+EKH+ PG+RFRLGGLVQ GSL RG Sbjct: 8 LTMIGGALVVLGIAAALVLNALRDSIVFFSTPMMVSEKHIQPGQRFRLGGLVQTGSLVRG 67 Query: 61 DNLAVTFTVADGGATLPVAYKGILPDLFREGQGVVAEGALDASGVFRADTVLAKHDETYM 120 DNLAV+F V+DG ATLPV+YKGILPDLFREGQGVVAEGALD SGVF+ADTVLAKHDETYM Sbjct: 68 DNLAVSFRVSDGSATLPVSYKGILPDLFREGQGVVAEGALDNSGVFQADTVLAKHDETYM 127 Query: 121 PKDVADALKKQGHWKDDYGAKSGNTPSAS 149 PK+VADALKKQGHWKDDYGA+ G ++S Sbjct: 128 PKEVADALKKQGHWKDDYGAQPGAAEASS 156 >ref|ZP_01046350.1| CcmE/CycJ protein [Nitrobacter sp. Nb-311A] gb|EAQ35664.1| CcmE/CycJ protein [Nitrobacter sp. Nb-311A] Length = 162 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 121/143 (84%), Positives = 133/143 (93%) Query: 1 LTLIGCALVVLAIAAGLVLNALRDSIVFFSTPSMVAEKHLGPGKRFRLGGLVQPGSLNRG 60 LT+I +LVVL IAAGLVLNALRDSIVFFSTP MV+EKH+ PG+RFRLGGLVQ GSL RG Sbjct: 8 LTMIVGSLVVLGIAAGLVLNALRDSIVFFSTPMMVSEKHIQPGQRFRLGGLVQTGSLVRG 67 Query: 61 DNLAVTFTVADGGATLPVAYKGILPDLFREGQGVVAEGALDASGVFRADTVLAKHDETYM 120 +NLAVTF V+DG ATLPVAY GILPDLFREGQGVVAEGALD+SGVF+ADTVLAKHDETYM Sbjct: 68 ENLAVTFKVSDGSATLPVAYTGILPDLFREGQGVVAEGALDSSGVFQADTVLAKHDETYM 127 Query: 121 PKDVADALKKQGHWKDDYGAKSG 143 PK+VADALKKQGHWKDDYGA++G Sbjct: 128 PKEVADALKKQGHWKDDYGARAG 150 >ref|YP_576720.1| cytochrome c-type biogenesis protein CcmE [Nitrobacter hamburgensis X14] sp|Q1QND7.1|CCME_NITHX RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE gb|ABE62260.1| CcmE/CycJ protein [Nitrobacter hamburgensis X14] Length = 162 Score = 250 bits (638), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 121/143 (84%), Positives = 131/143 (91%) Query: 1 LTLIGCALVVLAIAAGLVLNALRDSIVFFSTPSMVAEKHLGPGKRFRLGGLVQPGSLNRG 60 LT+IG +LVVLAIAA LVLNALRDSIVFFSTP MV+E H+ PG+RFRLGGLVQ GSL RG Sbjct: 8 LTMIGGSLVVLAIAAALVLNALRDSIVFFSTPVMVSEHHIQPGQRFRLGGLVQNGSLVRG 67 Query: 61 DNLAVTFTVADGGATLPVAYKGILPDLFREGQGVVAEGALDASGVFRADTVLAKHDETYM 120 DNL VTF V+DG ATLPV YKGILPDLFREGQGVVAEGALD+SGVFRADTVLAKHDETYM Sbjct: 68 DNLVVTFKVSDGSATLPVTYKGILPDLFREGQGVVAEGALDSSGVFRADTVLAKHDETYM 127 Query: 121 PKDVADALKKQGHWKDDYGAKSG 143 PK+VADALKKQGHWKDDYG ++G Sbjct: 128 PKEVADALKKQGHWKDDYGPQAG 150