BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0013.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767496.1| hypothetical protein bll0856 [Bradyrhizobium ja... 436 e-120 ref|YP_001206170.1| hypothetical protein BRADO4193 [Bradyrhizobi... 410 e-113 ref|YP_001240504.1| hypothetical protein BBta_4568 [Bradyrhizobi... 407 e-111 ref|ZP_08630497.1| hypothetical protein CSIRO_3607 [Bradyrhizobi... 371 e-101 ref|YP_003549790.1| metallophosphoesterase [Coraliomargarita aka... 216 3e-54 >ref|NP_767496.1| hypothetical protein bll0856 [Bradyrhizobium japonicum USDA 110] dbj|BAC46121.1| bll0856 [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 210/275 (76%), Positives = 236/275 (85%) Query: 1 MRCLVVADLHYSLPQFDWLLAAAPQFDLVIFAGDALNLGSAVDFRAQIVVVTKYLSRLAD 60 MRCLVVADLHY+LPQFDWL++AAPQFDLVIFAGDAL++GS VDFRAQIVVV KYL+ LA Sbjct: 1 MRCLVVADLHYALPQFDWLVSAAPQFDLVIFAGDALDIGSMVDFRAQIVVVKKYLALLAG 60 Query: 61 LTRVIFCSGNHDLDERNPEGEKIARWVAGIREFGVACDGDNLTIGDTLFTVCPWWDGPLV 120 TRVI CSGNHDLDERN EGEKI+RW++ +RE G+ACDGD+LTIGDTLFTVCPWWDGPLV Sbjct: 61 KTRVIICSGNHDLDERNAEGEKISRWISEVRELGIACDGDSLTIGDTLFTVCPWWDGPLV 120 Query: 121 KARIDAQLRAAAAMPHKRWVWVHHAPPADSPTSWGGKRFFGDAELLGWIGRHHPAMVISG 180 K RI QLR AAA +RW+W HHAPPA+SPTSWGGKRFFGD E++ WI ++ P+MVISG Sbjct: 121 KQRIAEQLRDAAASRPQRWIWAHHAPPANSPTSWGGKRFFGDVEVVQWIMQYQPSMVISG 180 Query: 181 HVHQSPFIQSGSWFDRIGATWVFNTGLQPGRPPVYIVLDLAQDKAFWLAAGDAQMIDLKA 240 HVHQSPFI GSWFDR+G TWVFN GLQPGRPP +IVLDL +KAFWLAAG+AQ IDL A Sbjct: 181 HVHQSPFITDGSWFDRLGQTWVFNAGLQPGRPPTHIVLDLDANKAFWLAAGEAQWIDLDA 240 Query: 241 PLSRPAAPLRDAPDWLISLDRIADPSLARPASVAG 275 PL RPAA + PDWL LDRIADPSLARP + AG Sbjct: 241 PLKRPAALVEAPPDWLTFLDRIADPSLARPQAAAG 275 >ref|YP_001206170.1| hypothetical protein BRADO4193 [Bradyrhizobium sp. ORS 278] emb|CAL77945.1| conserved hypothetical protein; putative metallo-phosphoesterase domain [Bradyrhizobium sp. ORS 278] Length = 275 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/275 (70%), Positives = 227/275 (82%) Query: 1 MRCLVVADLHYSLPQFDWLLAAAPQFDLVIFAGDALNLGSAVDFRAQIVVVTKYLSRLAD 60 MRCL+VADLHY+LPQ DWL+AAA QF+LV+FAGDAL+L S VD RAQIVVV KYL+ LA Sbjct: 1 MRCLIVADLHYTLPQLDWLVAAADQFELVVFAGDALDLASIVDIRAQIVVVKKYLALLAA 60 Query: 61 LTRVIFCSGNHDLDERNPEGEKIARWVAGIREFGVACDGDNLTIGDTLFTVCPWWDGPLV 120 TRV+ CSGNHDL+ERN EGEKIA W+ +RE G+A DGD++ IG+TLF+VCPWWDGP V Sbjct: 61 KTRVMICSGNHDLEERNAEGEKIAAWITTVRELGIAADGDDILIGETLFSVCPWWDGPQV 120 Query: 121 KARIDAQLRAAAAMPHKRWVWVHHAPPADSPTSWGGKRFFGDAELLGWIGRHHPAMVISG 180 KA I+ QL AAAA W+WVHHAPPA+SP SWGGKRFFGD EL G+I RH PAMVISG Sbjct: 121 KAAIERQLDAAAARRPAHWIWVHHAPPANSPVSWGGKRFFGDTELEGFIARHRPAMVISG 180 Query: 181 HVHQSPFIQSGSWFDRIGATWVFNTGLQPGRPPVYIVLDLAQDKAFWLAAGDAQMIDLKA 240 HVHQSPFI+ GSWFDR+G TWVFNTG QPGRPP Y+V+D + +AFWLAAG + ID+ A Sbjct: 181 HVHQSPFIKGGSWFDRVGETWVFNTGRQPGRPPTYMVIDTDEQRAFWLAAGQGEWIDMAA 240 Query: 241 PLSRPAAPLRDAPDWLISLDRIADPSLARPASVAG 275 PL RPA P+R+APDWL ++DRI DP LARPA+ AG Sbjct: 241 PLQRPAQPVREAPDWLRAVDRIPDPFLARPAAAAG 275 >ref|YP_001240504.1| hypothetical protein BBta_4568 [Bradyrhizobium sp. BTAi1] gb|ABQ36598.1| hypothetical protein BBta_4568 [Bradyrhizobium sp. BTAi1] Length = 275 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/275 (70%), Positives = 225/275 (81%) Query: 1 MRCLVVADLHYSLPQFDWLLAAAPQFDLVIFAGDALNLGSAVDFRAQIVVVTKYLSRLAD 60 MRCLVVADLHY+LPQFDWL+AAA FD V+FAGDAL+L S VD RAQIVVV YL+ LA Sbjct: 1 MRCLVVADLHYALPQFDWLVAAADHFDAVVFAGDALDLASIVDIRAQIVVVKTYLALLAA 60 Query: 61 LTRVIFCSGNHDLDERNPEGEKIARWVAGIREFGVACDGDNLTIGDTLFTVCPWWDGPLV 120 TRV+ CSGNHDL+ER+ EGEKIA W+ +RE G+A DGD+L IG+TLF++CPWWDGPLV Sbjct: 61 KTRVMICSGNHDLEERSAEGEKIAAWIGTVRELGIAADGDDLLIGETLFSICPWWDGPLV 120 Query: 121 KARIDAQLRAAAAMPHKRWVWVHHAPPADSPTSWGGKRFFGDAELLGWIGRHHPAMVISG 180 KA I QL AAA +P RW+WVHHAPPA+SP SWGGKRFFGD EL G+I H PAMVISG Sbjct: 121 KAAIQRQLDAAAGLPAARWIWVHHAPPANSPVSWGGKRFFGDTELEGFIAHHRPAMVISG 180 Query: 181 HVHQSPFIQSGSWFDRIGATWVFNTGLQPGRPPVYIVLDLAQDKAFWLAAGDAQMIDLKA 240 HVHQSPFI+ GSWFDR+G TWVFNTG QPGRPP YIV+D ++AFWLAAG A+ IDL + Sbjct: 181 HVHQSPFIKDGSWFDRVGETWVFNTGRQPGRPPTYIVIDTDAEQAFWLAAGQAEWIDLAS 240 Query: 241 PLSRPAAPLRDAPDWLISLDRIADPSLARPASVAG 275 PL RPA P+ AP+WL ++DRI DP LARPA+ AG Sbjct: 241 PLQRPAQPVTVAPEWLRAVDRIPDPFLARPAAAAG 275 >ref|ZP_08630497.1| hypothetical protein CSIRO_3607 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06876.1| hypothetical protein CSIRO_3607 [Bradyrhizobiaceae bacterium SG-6C] Length = 275 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/274 (67%), Positives = 209/274 (76%), Gaps = 3/274 (1%) Query: 1 MRCLVVADLHYSLPQFDWLLAAAPQFDLVIFAGDALNLGSAVDFRAQIVVVTKYLSRLAD 60 MRCLVVADLHYSLPQFDW+L AA FD+VI AGDAL++GS VDFRAQIVVV KYL LAD Sbjct: 1 MRCLVVADLHYSLPQFDWVLNAAAHFDVVIIAGDALDIGSVVDFRAQIVVVRKYLKLLAD 60 Query: 61 LTRVIFCSGNHDLDERNPEGEKIARWVAGIREFGVACDGDNLTIGDTLFTVCPWWDGPLV 120 TRVI CSGNHDLDER+ EKI+RW+ I G+A DGD+LTIGDTLFTVCPWWDGP V Sbjct: 61 KTRVILCSGNHDLDERDSSDEKISRWIGDIGNLGIAHDGDSLTIGDTLFTVCPWWDGPRV 120 Query: 121 KARIDAQLRAAAAMPHKRWVWVHHAPPADSPTSWGGKRFFGDAELLGWIGRHHPAMVISG 180 KARI QL AA H RW+WVHHAPPA+SPTSW G RF GD EL+ WI +HP +V+SG Sbjct: 121 KARIGVQLEEAATERHGRWIWVHHAPPANSPTSWAGSRFQGDIELVQWIETYHPDIVLSG 180 Query: 181 HVHQSPFIQSGSWFDRIGATWVFNTGLQPGRPPVYIVLDLAQDKAFWLAAGDAQMIDLKA 240 HVHQSPF + GSWFDRIG TWVFN G Q G PP +I LDLA ++AFWL+A Q IDL A Sbjct: 181 HVHQSPFTKDGSWFDRIGDTWVFNAGHQFGSPPAFIALDLAANRAFWLSAAGEQSIDLGA 240 Query: 241 PLSRPAAPLRDAPDWLISLDRIADPS---LARPA 271 PL RPA + + P WLI+ + A PS L+ PA Sbjct: 241 PLQRPAGGIPEFPAWLIAAGQAAGPSPAMLSNPA 274 >ref|YP_003549790.1| metallophosphoesterase [Coraliomargarita akajimensis DSM 45221] gb|ADE55620.1| metallophosphoesterase [Coraliomargarita akajimensis DSM 45221] Length = 247 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/247 (43%), Positives = 154/247 (62%), Gaps = 3/247 (1%) Query: 1 MRCLVVADLHYSLPQFDWLLAAAPQFDLVIFAGDALNLGSAVDFRAQIVVVTKYLSRLAD 60 M+ L+VADLHY+LPQ+DWL A A +FD+V+ AGD L L S V AQIVV+ KYL R+A Sbjct: 1 MKLLLVADLHYTLPQWDWLDATAERFDIVVIAGDLLELNSIVPREAQIVVLRKYLQRIAK 60 Query: 61 LTRVIFCSGNHDLDERNPEGEKIARWVAGIREFGVACDGDNLTIGDTLFTVCPWWDGPLV 120 ++ CSGNHD + +P+G K A+W+ + DG++ T + F++ PWW+ Sbjct: 61 KVPLLVCSGNHDTLD-SPQG-KTAQWLQDKHDAKYWTDGEHYTADNLFFSILPWWESETD 118 Query: 121 KARIDAQL-RAAAAMPHKRWVWVHHAPPADSPTSWGGKRFFGDAELLGWIGRHHPAMVIS 179 + + QL R A+ KRW+WV+H PP SPT+W GK+ GD L WI R P +V+ Sbjct: 119 QIATERQLERDASQAMGKRWIWVYHPPPKGSPTAWNGKQDHGDPLLCQWIERFQPELVLG 178 Query: 180 GHVHQSPFIQSGSWFDRIGATWVFNTGLQPGRPPVYIVLDLAQDKAFWLAAGDAQMIDLK 239 GH+H +P++ GSW D IG TW N+GLQ G+ P + V ++ D+ W++ + + LK Sbjct: 179 GHIHNAPYLADGSWIDLIGHTWCLNSGLQLGQVPSFTVWEIPDDRLVWISNEEVEECFLK 238 Query: 240 APLSRPA 246 APL R + Sbjct: 239 APLKRSS 245