BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0002.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773734.1| hypothetical protein blr7094 [Bradyrhizobium ja... 782 0.0 ref|YP_576532.1| AsmA [Nitrobacter hamburgensis X14] >gi|9179969... 760 0.0 ref|YP_001203365.1| outer membrane protein assembly protein AsmA... 760 0.0 ref|YP_001242624.1| putative asmA protein, assembly of outer mem... 744 0.0 ref|YP_317623.1| hypothetical protein Nwi_1009 [Nitrobacter wino... 717 0.0 >ref|NP_773734.1| hypothetical protein blr7094 [Bradyrhizobium japonicum USDA 110] dbj|BAC52359.1| blr7094 [Bradyrhizobium japonicum USDA 110] Length = 666 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/488 (80%), Positives = 433/488 (88%), Gaps = 1/488 (0%) Query: 2 PIAALFGLALVGLVGTSWFLNRDALQRAVEAQIRAVTGLELVVNGPIDVSVFPGSYVSFH 61 PIAAL G+AL+ L+ TSW +NRDAL++AVEAQIR VTGLEL V GPID+SV P SY+SFH Sbjct: 35 PIAALLGVALIALIATSWLINRDALRKAVEAQIRDVTGLELSVAGPIDISVLPASYISFH 94 Query: 62 NVGLKGADTIGPALQVDVLTANLRLLPLLLRRFEIADVMMLRPHIHVVRDGAGESNWTPF 121 +VGLKG T PAL+VDVLTANLRLLPLLL+RFEIAD+ +LRP IHV GESNWTPF Sbjct: 95 DVGLKGGGTSDPALRVDVLTANLRLLPLLLQRFEIADLTLLRPRIHVSLKPDGESNWTPF 154 Query: 122 VETIAKAMTPGAENQVSFSEIRIQDGELNYQDGTNNISEQLGDIDLSLAWPSISRSFAAT 181 ++TIA+ M PGAENQVSFSEIRIQDG LNY+D + +EQ DIDLSLAWPSISRSFAAT Sbjct: 155 IQTIARTMKPGAENQVSFSEIRIQDGVLNYEDAATHATEQFDDIDLSLAWPSISRSFAAT 214 Query: 182 GQFDWRGERVDGSISASDFVALLSGDRSGLKARLASAPLKVAFDGTVANRTSLMMEGVAT 241 GQFDWRGERVDGSIS +DFVA LSGDRSGLKAR+ASAPLK+AFDG+VANRTS MMEG T Sbjct: 215 GQFDWRGERVDGSISFADFVAALSGDRSGLKARIASAPLKLAFDGSVANRTSPMMEGTLT 274 Query: 242 MDSPSLRNALRWMGQAPPGGGGGFGRFALKARANVVGGSVALTNVNVELDGNVAEGVMTY 301 +DSPSLRNALRW GQ P G GGFGRFALKARANVVG S+ALTNVNVELDGN AEGVMTY Sbjct: 275 IDSPSLRNALRWTGQPQP-GSGGFGRFALKARANVVGASIALTNVNVELDGNAAEGVMTY 333 Query: 302 ANNGRQTLQATLAAGNLDFTPYISTFRLLASGQRDWNRQLFDLSSLSSTDLDMRLSAAKV 361 ANNGRQTLQATLAA LDFTPYISTFRLLASG RDWNRQLFDL+ LS+TDLDMRLSAA++ Sbjct: 334 ANNGRQTLQATLAADALDFTPYISTFRLLASGARDWNRQLFDLNGLSTTDLDMRLSAARL 393 Query: 362 TVGPSKLGRTAFGANLRGGALALSVGEAQMYGGIAKGSFAIARSDAVADVRAQFQFTDVD 421 TVGPSKLGRTA GANLR G LALSVGEAQ+YGGIAKGSF IAR+D VAD++AQFQFTDVD Sbjct: 394 TVGPSKLGRTAIGANLRNGTLALSVGEAQVYGGIAKGSFGIARADTVADIKAQFQFTDVD 453 Query: 422 LQACASELFGINKLSGRGNLNVSLTASGSSPFGLASSLDGTATLNGHDGAIAGFNVEQLL 481 LQACASELFG+NKLSGRGN+NVSL ASGSSPFGL SLDG+AT+ GHDGAI+GFN EQLL Sbjct: 454 LQACASELFGLNKLSGRGNINVSLVASGSSPFGLVQSLDGSATVTGHDGAISGFNAEQLL 513 Query: 482 KRLEKRPL 489 KRLE+RPL Sbjct: 514 KRLERRPL 521 >ref|YP_576532.1| AsmA [Nitrobacter hamburgensis X14] gb|ABE62072.1| AsmA [Nitrobacter hamburgensis X14] Length = 643 Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/492 (75%), Positives = 427/492 (86%), Gaps = 4/492 (0%) Query: 1 MPIAALFGLALVGLVG---TSWFLNRDALQRAVEAQIRAVTGLELVVNGPIDVSVFPGSY 57 + +AA+ G+AL+GL G S L+RDAL++AVE QI AVTGL+ V +G IDVSVFPGSY Sbjct: 6 ISVAAILGVALIGLTGLISMSRLLDRDALRQAVETQISAVTGLDFVADGRIDVSVFPGSY 65 Query: 58 VSFHNVGLKGADTIGPALQVDVLTANLRLLPLLLRRFEIADVMMLRPHIHVVRDGAGESN 117 VSFH+V +KG+D PAL VDVLTANLRLLPLL++RF+IAD+M+LRPHI V R G+SN Sbjct: 66 VSFHDVRIKGSDAGAPALSVDVLTANLRLLPLLMQRFQIADIMLLRPHIRVTRAADGQSN 125 Query: 118 WTPFVETIAKAMTPGAENQVSFSEIRIQDGELNYQDGTNNISEQLGDIDLSLAWPSISRS 177 W PFVETIA+ M PGA++ VSFSEIR+QDGEL+Y+D N +SE+LGDIDLSLAWPSISRS Sbjct: 126 WIPFVETIARTMKPGADSPVSFSEIRVQDGELSYEDTANEVSEKLGDIDLSLAWPSISRS 185 Query: 178 FAATGQFDWRGERVDGSISASDFVALLSGDRSGLKARLASAPLKVAFDGTVANRTSLMME 237 FAATGQFDWRGER+DGSIS SDF+A LSG+RSGLK ++ASAPLK AFDGTVAN SLMME Sbjct: 186 FAATGQFDWRGERIDGSISLSDFLAALSGERSGLKVKVASAPLKFAFDGTVANPVSLMME 245 Query: 238 GVATMDSPSLRNALRWMGQAPPGGGGGFGRFALKARANVVGGSVALTNVNVELDGNVAEG 297 G T DS SLR ALRW+GQ PPG GG FGRFALKARA+++G S+ALTNVN+E+DGNVAEG Sbjct: 246 GTLTADSTSLREALRWIGQPPPGSGG-FGRFALKARASMIGASIALTNVNIEIDGNVAEG 304 Query: 298 VMTYANNGRQTLQATLAAGNLDFTPYISTFRLLASGQRDWNRQLFDLSSLSSTDLDMRLS 357 VMTYANNGRQTLQATLAAG LDFTPY+ T RLLASG RDWNRQLFDL +LS+TDLDMRLS Sbjct: 305 VMTYANNGRQTLQATLAAGALDFTPYVQTIRLLASGARDWNRQLFDLHALSATDLDMRLS 364 Query: 358 AAKVTVGPSKLGRTAFGANLRGGALALSVGEAQMYGGIAKGSFAIARSDAVADVRAQFQF 417 AAKVTVG ++LG+TA GANLR G LALS+GEAQ+Y GIAKGSF I+R+DA ADV+AQFQ Sbjct: 365 AAKVTVGSTRLGKTALGANLRNGTLALSIGEAQIYDGIAKGSFGISRADATADVKAQFQL 424 Query: 418 TDVDLQACASELFGINKLSGRGNLNVSLTASGSSPFGLASSLDGTATLNGHDGAIAGFNV 477 TDVDLQACAS+LFG +LSGRGNLNVSL A GSSPFGLA SLDGTATL GHDGAI+GFN+ Sbjct: 425 TDVDLQACASDLFGTGRLSGRGNLNVSLEAKGSSPFGLAQSLDGTATLTGHDGAISGFNI 484 Query: 478 EQLLKRLEKRPL 489 EQLLKRLE+RPL Sbjct: 485 EQLLKRLERRPL 496 >ref|YP_001203365.1| outer membrane protein assembly protein AsmA [Bradyrhizobium sp. ORS 278] emb|CAL75128.1| possible asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. ORS 278] Length = 653 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/490 (77%), Positives = 431/490 (87%), Gaps = 1/490 (0%) Query: 2 PIAALFGLALVGLVGTSWFLNRDALQRAVEAQIRAVTGLELVVNGPIDVSVFPGSYVSFH 61 PIA L G+A VGL+ +SW +NRDAL+RAVE QIRAVTGLELVV GPIDVS+FPGSYVSFH Sbjct: 15 PIAVLLGIAFVGLLTSSWLVNRDALRRAVETQIRAVTGLELVVKGPIDVSLFPGSYVSFH 74 Query: 62 NVGLKGADTIGPALQVDVLTANLRLLPLLLRRFEIADVMMLRPHIHVVRDGAGESNWTPF 121 +VG KG+ PAL+VDVLTANL+LLPLLL+RFEIADVMMLRP I+V R+ G SNWTPF Sbjct: 75 DVGFKGSTADDPALRVDVLTANLQLLPLLLQRFEIADVMMLRPQINVTREANGNSNWTPF 134 Query: 122 VETIAKAMTPGAENQVSFSEIRIQDGELNYQDGTNNISEQLGDIDLSLAWPSISRSFAAT 181 ++TI + M PG+++Q+SFSEIRIQDG L Y D ++ SE+L DIDLSLAWPSISRSFAAT Sbjct: 135 IDTITRTMRPGSDSQMSFSEIRIQDGVLTYDDNGHHASERLDDIDLSLAWPSISRSFAAT 194 Query: 182 GQFDWRGERVDGSISASDFVALLSGDRSGLKARLASAPLKVAFDGTVANRTSLMMEGVAT 241 GQFDWRG+R++GS+S SDF+A LSGDRSGLK RLAS PLKVAFDGTVANRTS +MEG T Sbjct: 195 GQFDWRGQRIEGSVSISDFLAALSGDRSGLKMRLASPPLKVAFDGTVANRTSALMEGTLT 254 Query: 242 MDSPSLRNALRWMGQAPPGGGGGFGRFALKARANVVGGSVALTNVNVELDGNVAEGVMTY 301 +DSPSLR+ALRW GQ P G GGFGRFAL+ARANVVG SVALTNVNVELDGN AEGVMTY Sbjct: 255 VDSPSLRDALRWTGQTPL-GSGGFGRFALRARANVVGASVALTNVNVELDGNAAEGVMTY 313 Query: 302 ANNGRQTLQATLAAGNLDFTPYISTFRLLASGQRDWNRQLFDLSSLSSTDLDMRLSAAKV 361 ANNGRQ+LQATLAA LDFTPYISTFRLLA+G RDWNRQLFDL +LS+TDLDMRLSAAKV Sbjct: 314 ANNGRQSLQATLAADALDFTPYISTFRLLANGARDWNRQLFDLKALSTTDLDMRLSAAKV 373 Query: 362 TVGPSKLGRTAFGANLRGGALALSVGEAQMYGGIAKGSFAIARSDAVADVRAQFQFTDVD 421 TVG SKLGRTAFGANLR G LALSVGEAQMYGG+ +GSF IAR+D VADV+A+ QFTDVD Sbjct: 374 TVGSSKLGRTAFGANLRNGVLALSVGEAQMYGGVVRGSFGIARADTVADVKAELQFTDVD 433 Query: 422 LQACASELFGINKLSGRGNLNVSLTASGSSPFGLASSLDGTATLNGHDGAIAGFNVEQLL 481 LQACA+E+FG++ LSGRGNLNVSLTASGSSPFGLA SLDG+A L G DGAI+GFNVEQLL Sbjct: 434 LQACANEMFGVSSLSGRGNLNVSLTASGSSPFGLAQSLDGSANLQGRDGAISGFNVEQLL 493 Query: 482 KRLEKRPLKK 491 KRLE+ PL + Sbjct: 494 KRLERSPLSR 503 >ref|YP_001242624.1| putative asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. BTAi1] gb|ABQ38718.1| putative asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. BTAi1] Length = 645 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/490 (77%), Positives = 424/490 (86%), Gaps = 1/490 (0%) Query: 2 PIAALFGLALVGLVGTSWFLNRDALQRAVEAQIRAVTGLELVVNGPIDVSVFPGSYVSFH 61 PIA L G+A +GL +SW +NRDAL+RAVE QIRAVTGLELVV G IDVS+FPGSYVSFH Sbjct: 7 PIAVLLGVAFIGLFVSSWLVNRDALRRAVETQIRAVTGLELVVKGHIDVSLFPGSYVSFH 66 Query: 62 NVGLKGADTIGPALQVDVLTANLRLLPLLLRRFEIADVMMLRPHIHVVRDGAGESNWTPF 121 +VGLKG T PAL+VDVLTANL+LLPLLL+RFEIAD+M+LRP I+V+R+ G SNWTPF Sbjct: 67 DVGLKGGGTADPALRVDVLTANLQLLPLLLQRFEIADLMLLRPQINVIREANGSSNWTPF 126 Query: 122 VETIAKAMTPGAENQVSFSEIRIQDGELNYQDGTNNISEQLGDIDLSLAWPSISRSFAAT 181 + TIA M PG ++Q+SFSEIRIQDG L + D E+L DIDLSLAWPSISRSFAAT Sbjct: 127 IATIAHTMRPGPDSQMSFSEIRIQDGVLVFDDNGTRSQERLDDIDLSLAWPSISRSFAAT 186 Query: 182 GQFDWRGERVDGSISASDFVALLSGDRSGLKARLASAPLKVAFDGTVANRTSLMMEGVAT 241 GQFDWRG+R++GSIS SDF+A LSGDRSGLK RLAS PLKVAFDGTVANRTS +MEG T Sbjct: 187 GQFDWRGQRIEGSISVSDFLAALSGDRSGLKMRLASPPLKVAFDGTVANRTSALMEGTLT 246 Query: 242 MDSPSLRNALRWMGQAPPGGGGGFGRFALKARANVVGGSVALTNVNVELDGNVAEGVMTY 301 +DSPSLR ALRW GQ P G GGFGRFAL+ARANVVG S+ALTNVNVELDGN AEGVMTY Sbjct: 247 VDSPSLREALRWTGQTPL-GSGGFGRFALRARANVVGASIALTNVNVELDGNTAEGVMTY 305 Query: 302 ANNGRQTLQATLAAGNLDFTPYISTFRLLASGQRDWNRQLFDLSSLSSTDLDMRLSAAKV 361 ANNGRQ LQATLAA LDFTPYIST RLLA+G RDWNRQLFDL +LS+TDLDMRLSAAKV Sbjct: 306 ANNGRQALQATLAADALDFTPYISTVRLLANGARDWNRQLFDLKALSTTDLDMRLSAAKV 365 Query: 362 TVGPSKLGRTAFGANLRGGALALSVGEAQMYGGIAKGSFAIARSDAVADVRAQFQFTDVD 421 TVGPSKLGRTAFGANLR G LALSVGEAQMYGGI +GS IAR+DAVADV+A+ QF DVD Sbjct: 366 TVGPSKLGRTAFGANLRNGVLALSVGEAQMYGGIVRGSVGIARADAVADVKAELQFADVD 425 Query: 422 LQACASELFGINKLSGRGNLNVSLTASGSSPFGLASSLDGTATLNGHDGAIAGFNVEQLL 481 LQ+CA+ELFG++ +SGRGNLNVSLTASGSSPFGLA SLDG+ATL G DG+I+GFNVEQLL Sbjct: 426 LQSCANELFGVSSISGRGNLNVSLTASGSSPFGLAQSLDGSATLQGRDGSISGFNVEQLL 485 Query: 482 KRLEKRPLKK 491 KRLE+ PL + Sbjct: 486 KRLERSPLSR 495 >ref|YP_317623.1| hypothetical protein Nwi_1009 [Nitrobacter winogradskyi Nb-255] gb|ABA04271.1| Uncharacterized protein involved in outer membrane biogenesis [Nitrobacter winogradskyi Nb-255] Length = 656 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/492 (72%), Positives = 411/492 (83%), Gaps = 4/492 (0%) Query: 1 MPIAALFGLALVGLVG---TSWFLNRDALQRAVEAQIRAVTGLELVVNGPIDVSVFPGSY 57 + +AA+ G+A++GL G S L+ DAL+ AVE QIR VTGL+ V +G IDVSVFPGSY Sbjct: 19 ISVAAILGVAVIGLTGLISMSRLLDHDALRDAVETQIRTVTGLDFVADGRIDVSVFPGSY 78 Query: 58 VSFHNVGLKGADTIGPALQVDVLTANLRLLPLLLRRFEIADVMMLRPHIHVVRDGAGESN 117 VSFH+V +KG D PAL V+ LTANLRL PLL++RF+IADVM+L PHI V R G SN Sbjct: 79 VSFHDVRIKGGDADAPALSVEALTANLRLFPLLMQRFQIADVMLLHPHIRVRRAADGRSN 138 Query: 118 WTPFVETIAKAMTPGAENQVSFSEIRIQDGELNYQDGTNNISEQLGDIDLSLAWPSISRS 177 WTPF+ETIA+ M PGA+N +SFSEIRIQ+GEL+Y+DG ISE L IDLSLAWPSISRS Sbjct: 139 WTPFMETIARNMKPGADNPLSFSEIRIQNGELSYEDGDGRISENLHGIDLSLAWPSISRS 198 Query: 178 FAATGQFDWRGERVDGSISASDFVALLSGDRSGLKARLASAPLKVAFDGTVANRTSLMME 237 FAATGQFDWRGERVDGSIS DF+A LSG+RSGLK ++AS LK AFDGTVAN SL+ME Sbjct: 199 FAATGQFDWRGERVDGSISLGDFLAALSGERSGLKIKVASPRLKFAFDGTVANPVSLIME 258 Query: 238 GVATMDSPSLRNALRWMGQAPPGGGGGFGRFALKARANVVGGSVALTNVNVELDGNVAEG 297 G + DS SLR ALRW+GQ PPG GG F RF+LKARA+V+G SVALTNVN+E+DGNVAEG Sbjct: 259 GTLSADSTSLREALRWIGQPPPGSGG-FDRFSLKARASVIGSSVALTNVNIEIDGNVAEG 317 Query: 298 VMTYANNGRQTLQATLAAGNLDFTPYISTFRLLASGQRDWNRQLFDLSSLSSTDLDMRLS 357 VMTYANNGRQTLQATLAAG LDFTPY+ T RLLASG RDWNRQLFDL +LS+TDLDMRLS Sbjct: 318 VMTYANNGRQTLQATLAAGTLDFTPYVKTIRLLASGARDWNRQLFDLRALSATDLDMRLS 377 Query: 358 AAKVTVGPSKLGRTAFGANLRGGALALSVGEAQMYGGIAKGSFAIARSDAVADVRAQFQF 417 AAKV VG ++LG+TA GANLR G+LALS+GEAQ+Y G+AKGSFAI+ ++ ADV+AQFQ Sbjct: 378 AAKVIVGSTRLGKTALGANLRNGSLALSIGEAQIYDGVAKGSFAISHAEEAADVKAQFQL 437 Query: 418 TDVDLQACASELFGINKLSGRGNLNVSLTASGSSPFGLASSLDGTATLNGHDGAIAGFNV 477 DVDLQAC S+LFG +LSGRGNLNVSL A GSSP+GLA SLDGTA LNGHDGAI+GFNV Sbjct: 438 IDVDLQACVSDLFGTGRLSGRGNLNVSLEARGSSPYGLAQSLDGTAVLNGHDGAISGFNV 497 Query: 478 EQLLKRLEKRPL 489 EQLLKRLE+RPL Sbjct: 498 EQLLKRLERRPL 509