BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0043.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_533276.1| peptidase S1C, Do [Rhodopseudomonas palustris B... 405 e-111 ref|YP_576853.1| peptidase S1C, Do [Nitrobacter hamburgensis X14... 398 e-108 ref|NP_948560.1| peptidase S1C Do [Rhodopseudomonas palustris CG... 397 e-108 ref|YP_782467.1| peptidase S1C, Do [Rhodopseudomonas palustris B... 395 e-108 ref|YP_004108538.1| protease Do [Rhodopseudomonas palustris DX-1... 391 e-106 >ref|YP_533276.1| peptidase S1C, Do [Rhodopseudomonas palustris BisB18] gb|ABD88957.1| Peptidase S1C, Do [Rhodopseudomonas palustris BisB18] Length = 467 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/240 (85%), Positives = 217/240 (90%), Gaps = 5/240 (2%) Query: 1 LAFMGNLSAAA-AQDRRVPSSQAELQLSYAPIVQRVQPAVVNVYAAKTVQNRNPFLDDPI 59 LA + ++ A A QDRRVPSS AEL+LSYAPIVQRVQPAVVNVYAAK VQNRNP L+DPI Sbjct: 12 LALILSVPAQAQPQDRRVPSSPAELKLSYAPIVQRVQPAVVNVYAAKVVQNRNPLLEDPI 71 Query: 60 XPIFRRFFGVPGQQPEQMQRSLGSGVMVDGSGLVVTNNHVIEGADQVKVSLADKREYEAE 119 FRRFFGVPGQQPEQMQRSLGSGVMVD SGLVVTNNHVIEGADQVKVSL+DKRE+EAE Sbjct: 72 ---FRRFFGVPGQQPEQMQRSLGSGVMVDPSGLVVTNNHVIEGADQVKVSLSDKREFEAE 128 Query: 120 IVLKDSRTDLAVLRLKNTNKEKFATLDFANSDQLLVGDVVLAIGNPFGVGQTVTHGIISA 179 IVLKDSRTDLAVLRLK EKF TLDF+NSD+LLVGDVVLAIGNPFGVGQTVTHGIISA Sbjct: 129 IVLKDSRTDLAVLRLKEVAGEKFPTLDFSNSDELLVGDVVLAIGNPFGVGQTVTHGIISA 188 Query: 180 LARTQVGITDYQFFIQTDAAINPGNSGGALVDMSGRLAGHQTTAILSRSGGSQGIGFAIP 239 LARTQVGITDYQFFIQTDAAINPGNSGGALVD++GRL G TAI SRSGGSQGIGFAIP Sbjct: 189 LARTQVGITDYQFFIQTDAAINPGNSGGALVDVNGRLVGIN-TAIFSRSGGSQGIGFAIP 247 >ref|YP_576853.1| peptidase S1C, Do [Nitrobacter hamburgensis X14] gb|ABE62393.1| Peptidase S1C, Do [Nitrobacter hamburgensis X14] Length = 468 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 200/230 (86%), Positives = 212/230 (92%), Gaps = 5/230 (2%) Query: 10 AAAQDRRVPSSQAELQLSYAPIVQRVQPAVVNVYAAKTVQNRNPFLDDPIXPIFRRFFGV 69 A AQDRRVP+SQAEL+LSYAPIVQRV PAVVNVYAAK +Q+RNP LDDPI FRRFFGV Sbjct: 24 ATAQDRRVPASQAELRLSYAPIVQRVAPAVVNVYAAKVIQHRNPLLDDPI---FRRFFGV 80 Query: 70 PGQQPEQMQRSLGSGVMVDGSGLVVTNNHVIEGADQVKVSLADKREYEAEIVLKDSRTDL 129 PGQQPEQMQRSLGSGVMVD SGLVVTNNHVIEGADQVKV+L+DKRE+EAEIVLKD+RTDL Sbjct: 81 PGQQPEQMQRSLGSGVMVDPSGLVVTNNHVIEGADQVKVALSDKREFEAEIVLKDTRTDL 140 Query: 130 AVLRLKNTNKEKFATLDFANSDQLLVGDVVLAIGNPFGVGQTVTHGIISALARTQVGITD 189 AVLRLK + EKF TLDFANSD+L VGDVV+AIGNPFGVGQTVTHGIISALARTQVGITD Sbjct: 141 AVLRLKGVH-EKFPTLDFANSDELQVGDVVIAIGNPFGVGQTVTHGIISALARTQVGITD 199 Query: 190 YQFFIQTDAAINPGNSGGALVDMSGRLAGHQTTAILSRSGGSQGIGFAIP 239 YQFFIQTDAAINPGNSGGALVDM+G LAG TAI SRSGGSQGIGFAIP Sbjct: 200 YQFFIQTDAAINPGNSGGALVDMTGHLAGIN-TAIFSRSGGSQGIGFAIP 248 >ref|NP_948560.1| peptidase S1C Do [Rhodopseudomonas palustris CGA009] ref|YP_001992612.1| protease Do [Rhodopseudomonas palustris TIE-1] emb|CAE28662.1| heat shock protein HtrA like [Rhodopseudomonas palustris CGA009] gb|ACF02137.1| protease Do [Rhodopseudomonas palustris TIE-1] Length = 463 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/229 (88%), Positives = 212/229 (92%), Gaps = 6/229 (2%) Query: 11 AAQDRRVPSSQAELQLSYAPIVQRVQPAVVNVYAAKTVQNRNPFLDDPIXPIFRRFFGVP 70 AAQDRRVPSS AEL+LSYAPIVQ VQPAVVNVYAAK VQNRNP L+DPI FRRFFGVP Sbjct: 21 AAQDRRVPSSPAELKLSYAPIVQHVQPAVVNVYAAKVVQNRNPLLEDPI---FRRFFGVP 77 Query: 71 GQQPEQMQRSLGSGVMVDGSGLVVTNNHVIEGADQVKVSLADKREYEAEIVLKDSRTDLA 130 GQ PEQ+QRSLGSGVMVD SGLVVTNNHVIEGADQVKV+LADKRE+EAEIVLKDSRTDLA Sbjct: 78 GQ-PEQIQRSLGSGVMVDASGLVVTNNHVIEGADQVKVALADKREFEAEIVLKDSRTDLA 136 Query: 131 VLRLKNTNKEKFATLDFANSDQLLVGDVVLAIGNPFGVGQTVTHGIISALARTQVGITDY 190 VLRLK+T+ EKF TLDFANSD LLVGDVVLAIGNPFGVGQTVTHGI+SALARTQVGITDY Sbjct: 137 VLRLKDTS-EKFPTLDFANSDDLLVGDVVLAIGNPFGVGQTVTHGIVSALARTQVGITDY 195 Query: 191 QFFIQTDAAINPGNSGGALVDMSGRLAGHQTTAILSRSGGSQGIGFAIP 239 QFFIQTDAAINPGNSGGALVD+SG+L G TAI SRSGGSQGIGFAIP Sbjct: 196 QFFIQTDAAINPGNSGGALVDVSGKLVGIN-TAIFSRSGGSQGIGFAIP 243 >ref|YP_782467.1| peptidase S1C, Do [Rhodopseudomonas palustris BisA53] gb|ABJ07487.1| protease Do [Rhodopseudomonas palustris BisA53] Length = 464 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 201/239 (84%), Positives = 214/239 (89%), Gaps = 6/239 (2%) Query: 1 LAFMGNLSAAAAQDRRVPSSQAELQLSYAPIVQRVQPAVVNVYAAKTVQNRNPFLDDPIX 60 L+F L A A QDRRVP+S EL+LSYA IVQR PAVVNVYAAK +QNRNP LDDPI Sbjct: 12 LSFAAALPALA-QDRRVPASATELKLSYATIVQRAAPAVVNVYAAKVIQNRNPLLDDPI- 69 Query: 61 PIFRRFFGVPGQQPEQMQRSLGSGVMVDGSGLVVTNNHVIEGADQVKVSLADKREYEAEI 120 FRRFFGVPGQQPEQMQRSLGSGVMVD SGLVVTNNHVIEGADQVKVSL+DKRE+EAEI Sbjct: 70 --FRRFFGVPGQQPEQMQRSLGSGVMVDPSGLVVTNNHVIEGADQVKVSLSDKREFEAEI 127 Query: 121 VLKDSRTDLAVLRLKNTNKEKFATLDFANSDQLLVGDVVLAIGNPFGVGQTVTHGIISAL 180 VLKDSRTDLAVLRLK+T+ EKF TLDFANSD LLVGD+VLAIGNPFGVGQTVTHGI+SAL Sbjct: 128 VLKDSRTDLAVLRLKDTS-EKFPTLDFANSDDLLVGDLVLAIGNPFGVGQTVTHGIVSAL 186 Query: 181 ARTQVGITDYQFFIQTDAAINPGNSGGALVDMSGRLAGHQTTAILSRSGGSQGIGFAIP 239 ARTQVGITDYQFFIQTDAAINPGNSGGALVD++G+L G TAI SRSGGSQGIGFAIP Sbjct: 187 ARTQVGITDYQFFIQTDAAINPGNSGGALVDVNGKLVGIN-TAIFSRSGGSQGIGFAIP 244 >ref|YP_004108538.1| protease Do [Rhodopseudomonas palustris DX-1] gb|ADU43805.1| protease Do [Rhodopseudomonas palustris DX-1] Length = 463 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/229 (86%), Positives = 212/229 (92%), Gaps = 6/229 (2%) Query: 11 AAQDRRVPSSQAELQLSYAPIVQRVQPAVVNVYAAKTVQNRNPFLDDPIXPIFRRFFGVP 70 AAQ+RRVPSS A+L+LSYAPIVQ VQPAVVNVYAAK VQNRNP LDDPI FRRFFGVP Sbjct: 21 AAQERRVPSSPADLKLSYAPIVQHVQPAVVNVYAAKLVQNRNPLLDDPI---FRRFFGVP 77 Query: 71 GQQPEQMQRSLGSGVMVDGSGLVVTNNHVIEGADQVKVSLADKREYEAEIVLKDSRTDLA 130 GQ PEQ+QRSLGSGVMVD SGLVVTNNHVIEGADQVKV+LADKRE+EAEIVLKDSRTDLA Sbjct: 78 GQ-PEQIQRSLGSGVMVDASGLVVTNNHVIEGADQVKVALADKREFEAEIVLKDSRTDLA 136 Query: 131 VLRLKNTNKEKFATLDFANSDQLLVGDVVLAIGNPFGVGQTVTHGIISALARTQVGITDY 190 VLR+K+ +EKFATLDFANSD LLVGDVVLAIGNPFGVGQTVTHGI+SALARTQVGITDY Sbjct: 137 VLRIKD-GREKFATLDFANSDDLLVGDVVLAIGNPFGVGQTVTHGIVSALARTQVGITDY 195 Query: 191 QFFIQTDAAINPGNSGGALVDMSGRLAGHQTTAILSRSGGSQGIGFAIP 239 QFFIQTDAAINPGNSGGALVD++G+L G TAI SRSGGSQGIGFAIP Sbjct: 196 QFFIQTDAAINPGNSGGALVDITGKLIGIN-TAIFSRSGGSQGIGFAIP 243