BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0038.p (359 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_497492.1| hypothetical protein Saro_2220 [Novosphingobium... 272 7e-71 ref|YP_001411647.1| aminoglycoside phosphotransferase [Parvibacu... 256 3e-66 ref|YP_458039.1| hypothetical protein ELI_05750 [Erythrobacter l... 251 1e-64 ref|YP_004018192.1| hypothetical protein FraEuI1c_4323 [Frankia ... 239 4e-61 ref|YP_004523328.1| hypothetical protein JDM601_2074 [Mycobacter... 239 6e-61 >ref|YP_497492.1| hypothetical protein Saro_2220 [Novosphingobium aromaticivorans DSM 12444] gb|ABD26658.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM 12444] Length = 362 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 148/348 (42%), Positives = 199/348 (57%), Gaps = 2/348 (0%) Query: 8 PSRIDPEWMTRALREAGVIDQVRVVDLACKPVGNGLVGDSYRFRLTYDGDEPNMPASVVG 67 P +D W+ L +AGV+D R+V + + +G G VGD+ RF LTYD P PASV Sbjct: 8 PDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPLAPASVAA 67 Query: 68 KFPAADPDSRRSGSAHTLYVREVAFYRELAATVAIHTPRPILAEIDPATDDFTLILEDLA 127 KFP++DP SR++ ++ +LY REV FYR++A + + PR A +D DF L+ EDL Sbjct: 68 KFPSSDPTSRQTAASFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFVLLFEDLG 127 Query: 128 PARAGDQLAGCLIADCLTAMREAAALHAPRWSDPTLDAVPCFVVAAGRRRDLRAVLPGII 187 P AG+QL+GC I A+R+AAALHA P LD+ LRA+ P Sbjct: 128 PCEAGNQLSGCGIDQARDALRQAAALHAATLDHPVLDS-EWLQTDPQASAMLRALYPQAQ 186 Query: 188 GHYKERYRGVIEPEFLGLIDRLPDALLRYQSDRSAPRTLQHADFRLDNMLFDVRGNSHPM 247 ++ERY ++P + + D L + + + A R+ H DFRLDNMLF +R P+ Sbjct: 187 AIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIRDGQEPI 246 Query: 248 ATLDWQTLTVGPGIVDVAYFLSAGIDPIERRLHEADLVRFYHSELIRRGVRDYDWDRCWR 307 A +DWQT VG G+ D+ YF+ GI RR HEA L+ Y +E+ RRGV D Sbjct: 247 ALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVA-MTRDEIMD 305 Query: 308 DYRRYTLHGIMMGVVSALSVQRSERGDALFLKMTRGACAQALDHNSFS 355 DYR LHG+ V S+ V R+ERGDA FL M RGAC AL+HNS Sbjct: 306 DYRIGALHGVSTAVFSSAFVVRTERGDANFLSMARGACELALEHNSLG 353 >ref|YP_001411647.1| aminoglycoside phosphotransferase [Parvibaculum lavamentivorans DS-1] gb|ABS61990.1| aminoglycoside phosphotransferase [Parvibaculum lavamentivorans DS-1] Length = 362 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 132/343 (38%), Positives = 196/343 (57%), Gaps = 3/343 (0%) Query: 9 SRIDPEWMTRALREAGVIDQVRVVDLACKPVGNGLVGDSYRFRLTYDGDEPNMPASVVGK 68 ++I PEWMT LR AG + V +++ + VG G VG+S RF LTY+GD PA+VVGK Sbjct: 13 TKITPEWMTAVLRGAG--HEATVAEISGQRVGTGQVGESVRFALTYNGDAKGAPATVVGK 70 Query: 69 FPAADPDSRRSGSAHTLYVREVAFYRELAATVAIHTPRPILAEIDPATDDFTLILEDLAP 128 FP+ DP+SR +G Y+REV FYR LA + + TP + A++DP T DF LI+EDLAP Sbjct: 71 FPSPDPESRATGVNFGNYIREVNFYRHLADSAGLTTPVCLHADVDPETSDFVLIMEDLAP 130 Query: 129 ARAGDQLAGCLIADCLTAMREAAALHAPRWSDPTLDAVP-CFVVAAGRRRDLRAVLPGII 187 A+ G+QL G +A+ + EAA HA W+D +D +P F A RR ++ + Sbjct: 131 AQPGNQLRGTSLAETKLVLEEAAKFHASHWNDNAMDDIPWLFETKAAPRRTEPNLIGLLW 190 Query: 188 GHYKERYRGVIEPEFLGLIDRLPDALLRYQSDRSAPRTLQHADFRLDNMLFDVRGNSHPM 247 ++ERY I + + + + + ++ P+ L H DFR DNM+F +P+ Sbjct: 191 KGFRERYGARIPADCVEIGEAITRNFHHFKDGYDGPKCLTHNDFRPDNMMFGTAEGGYPV 250 Query: 248 ATLDWQTLTVGPGIVDVAYFLSAGIDPIERRLHEADLVRFYHSELIRRGVRDYDWDRCWR 307 A +DWQ++ G + DV+YFLS + +R+ HE +L+ YH L GV Y +D + Sbjct: 251 AVVDWQSVGFGCCMADVSYFLSGAMKREDRKAHEHELLTAYHRRLEELGVSGYSFDEMMK 310 Query: 308 DYRRYTLHGIMMGVVSALSVQRSERGDALFLKMTRGACAQALD 350 Y Y+ M +++ V+R+ERGD +F +M RG LD Sbjct: 311 HYALYSFSLFNMAFTASMIVERTERGDEMFFQMMRGGADHVLD 353 >ref|YP_458039.1| hypothetical protein ELI_05750 [Erythrobacter litoralis HTCC2594] gb|ABC63242.1| hypothetical protein ELI_05750 [Erythrobacter litoralis HTCC2594] Length = 346 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/348 (39%), Positives = 190/348 (54%), Gaps = 11/348 (3%) Query: 8 PSRIDPEWMTRALREAGVIDQVRVVDLACKPVGNGLVGDSYRFRLTYDGDEPNMPASVVG 67 P + P W++ L + V D+ P+G G VGDS RF D S+ Sbjct: 8 PDHVTPAWLSGVLAD-------EVSDVRWVPIGTGQVGDSVRFTFR---DAGGSERSLAA 57 Query: 68 KFPAADPDSRRSGSAHTLYVREVAFYRELAATVAIHTPRPILAEIDPATDDFTLILEDLA 127 KFPAAD SR + + LY +EV FY ++AA + + P+ + + DF L+ EDL Sbjct: 58 KFPAADQTSRATAATFGLYTKEVGFYDDIAAHLGVRIPKVHFSAVSDDGSDFILLFEDLG 117 Query: 128 PARAGDQLAGCLIADCLTAMREAAALHAPRWSDPTLDAVPCFVVAAGRRRDLRAVLPGII 187 PAR GDQ+AGC +AD A+R+ AA+HAP W + + + A +RA+ P Sbjct: 118 PARGGDQIAGCSLADAEAAIRQGAAIHAPSWHNDAVLELEWVAPKAEMSAQVRALYPQAQ 177 Query: 188 GHYKERYRGVIEPEFLGLIDRLPDALLRYQSDRSAPRTLQHADFRLDNMLFDVRGNSHPM 247 +++RY +E EF+ + + + A P + H DFRLDNMLFD+RG + P+ Sbjct: 178 AIWRQRYADSLEQEFMEICEGVAAAAETLFDGVPEPVCVVHGDFRLDNMLFDIRGGAEPI 237 Query: 248 ATLDWQTLTVGPGIVDVAYFLSAGIDPIERRLHEADLVRFYHSELIRRGVRDYDWDRCWR 307 A LDWQT+T+G + D+ YF+ GI R+ HE +L+ Y +E+ GV D W Sbjct: 238 AVLDWQTVTLGNPMTDIGYFMGCGIGDELRKAHERELLDLYRAEMAACGVS-LSHDDIWD 296 Query: 308 DYRRYTLHGIMMGVVSALSVQRSERGDALFLKMTRGACAQALDHNSFS 355 DYRR +HGI V SA V+R+ERGDA FL M RGACA AL H+S Sbjct: 297 DYRRGAIHGITTAVFSAAFVERTERGDANFLSMARGACALALAHDSLG 344 >ref|YP_004018192.1| hypothetical protein FraEuI1c_4323 [Frankia sp. EuI1c] gb|ADP82322.1| protein of unknown function DUF227 [Frankia sp. EuI1c] Length = 366 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 141/353 (39%), Positives = 193/353 (54%), Gaps = 10/353 (2%) Query: 4 LTADPSRIDPEWMTRALREAGVI-DQVRVVDLACKPVGNGLVGDSYRFRLTY-DGDEPNM 61 L +DP + W+T L +AG + D RV +G G VG + R+RL Y +G + Sbjct: 10 LVSDPRDVTAGWLTDVLSQAGALTDGARVTGFEATAIGTGAVGSTLRYRLRYAEGTGAAV 69 Query: 62 -PASVVGKFPAADPDSRRSGSAHTLYVREVAFYRELAATVAIHTPRPILAEIDPATDDFT 120 PA+VV KF +++ SR +G Y REVAFY+++A TV + PR A I+P T + Sbjct: 70 GPATVVAKFASSEEQSRATGVLTLTYEREVAFYQQIAHTVDVRQPRCYYAAIEPGTANVV 129 Query: 121 LILEDLAPARAGDQLAGCLIADCLTAMREAAALHAPRWSDPTLDAVPCFVVAA--GRRRD 178 ++L DLAPA GDQLAGC D A+ EAA LH PRW DPTL + Sbjct: 130 VVLADLAPAVPGDQLAGCDADDAALAVTEAARLHGPRWGDPTLLEKSWLTARSPVAISEV 189 Query: 179 LRAVLPGIIGHYKERYRGVIEPEFLGLIDRLPDALLRYQSDRSAPRTLQHADFRLDNMLF 238 RAV G + +R+R IEPE + + L + +Q+ R A T+ H DFR+DNM+F Sbjct: 190 YRAVWDGFV----DRFRASIEPEVITQGEALGAGIETWQAHRPAQLTVTHGDFRIDNMMF 245 Query: 239 DVRGNSHPMATLDWQTLTVGPGIVDVAYFLSAGIDPIERRLHEADLVRFYHSELIRRGVR 298 + G + +DWQT +G G DVAY + + ERR E DLVR YH L GV Sbjct: 246 EGSGAQRRVTIVDWQTPKLGAGAGDVAYLIGGSLPVGERRPRERDLVRRYHQALAPYGVT 305 Query: 299 D-YDWDRCWRDYRRYTLHGIMMGVVSALSVQRSERGDALFLKMTRGACAQALD 350 D Y ++ CW DYRRY+ G++ VV+ + V R+ERGDA+F + A D Sbjct: 306 DGYPFEDCWEDYRRYSWTGLITAVVAGMLVSRTERGDAMFATLANRHAAHTHD 358 >ref|YP_004523328.1| hypothetical protein JDM601_2074 [Mycobacterium sp. JDM601] gb|AEF36074.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length = 363 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 136/340 (40%), Positives = 187/340 (55%), Gaps = 1/340 (0%) Query: 11 IDPEWMTRALREAGVIDQVRVVDLACKPVGNGLVGDSYRFRLTYDGDEPNMPASVVGKFP 70 + EW T+ LR G + V + P+G G V D+ F L+YD + PASVV K P Sbjct: 16 MSAEWFTQVLRHCGALTDATVTAVTAAPIGTGQVADTLVFTLSYDRADSGGPASVVAKLP 75 Query: 71 AADPDSRRSGSAHTLYVREVAFYRELAATVAIHTPRPILAEIDPATDDFTLILEDLAPAR 130 A D +SR++ LY REV FY+ L A+ TP + ++IDPAT F L+LE++ P Sbjct: 76 ADDANSRQAAVMQRLYEREVRFYQNLRDQTAVATPGYLYSDIDPATGQFVLLLENMTPVA 135 Query: 131 AGDQLAGCLIADCLTAMREAAALHAPRWSDPTLDAVPCFVVAAGRRRDLRAVLPGIIGHY 190 A DQL+G + A+ +AAALHAP W + L V+P +I + Sbjct: 136 AVDQLSGFTVEHARCALAQAAALHAPFWGRSEFGDHDWLNHSRNTADILAEVVPLLIEQF 195 Query: 191 KERYRGVIEPEFLGLIDRLPDALLRYQSDRSAPRTLQHADFRLDNMLFDVRGNSHPMATL 250 ERY + P+ G + RL + ++ P T+ H DFR DNMLFD +G P+A + Sbjct: 196 CERYATQLGPDITGRMRRL-SVHAQQPAEPQGPITVVHGDFRTDNMLFDAKGGDVPVAVV 254 Query: 251 DWQTLTVGPGIVDVAYFLSAGIDPIERRLHEADLVRFYHSELIRRGVRDYDWDRCWRDYR 310 DWQT+ G G++DVA+ L +DP R HE +LVR Y L GV YDW +CW DYR Sbjct: 255 DWQTVDRGNGLIDVAFLLGTALDPELRAAHEQELVRSYFDALTAAGVSGYDWTQCWNDYR 314 Query: 311 RYTLHGIMMGVVSALSVQRSERGDALFLKMTRGACAQALD 350 R + + +A+ V+R+ERGDA+FL M R ACAQ D Sbjct: 315 RQAAYAVFFLAPAAMLVERTERGDAMFLTMIRRACAQISD 354