BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0037.p (375 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05094532.1| hypothetical protein GPB2148_1760 [marine gam... 334 1e-89 ref|YP_004523327.1| hypothetical protein JDM601_2073 [Mycobacter... 303 3e-80 ref|ZP_08152935.1| hypothetical protein HMPREF0724_10717 [Rhodoc... 303 4e-80 ref|YP_004005294.1| hypothetical protein REQ_04810 [Rhodococcus ... 300 2e-79 ref|YP_004018926.1| hypothetical protein FraEuI1c_5067 [Frankia ... 288 1e-75 >ref|ZP_05094532.1| hypothetical protein GPB2148_1760 [marine gamma proteobacterium HTCC2148] gb|EEB79112.1| hypothetical protein GPB2148_1760 [marine gamma proteobacterium HTCC2148] Length = 376 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 171/375 (45%), Positives = 240/375 (64%), Gaps = 3/375 (0%) Query: 1 VLNKLDDFPIHQTPEPIAVPSTSDRNVYDRTWFNGYTADGAYYFGIGIAIYPHRKILDCA 60 +L+KLDD+PIHQT +P+ ++SDR YDR W+N + DG++YFG+G+ YP+ ILD + Sbjct: 2 MLSKLDDYPIHQTVQPVFHTASSDRFHYDRYWYNAHAKDGSFYFGVGMCRYPNLGILDGS 61 Query: 61 FSVVERGGRQHCFYGSRRAPIERTEMQVGPFRLEVIEPMLRTRVVLDDNATGLACDLTFS 120 S+ GRQ+ F+GS RAP E T++ +GP L+++EPM R R+++ DN TG++CDL F+ Sbjct: 62 LSLA-IDGRQYAFHGSCRAPHEPTDLSIGPMELQILEPMGRHRLIIADNETGISCDLLFT 120 Query: 121 ARTAAIQEARQTLWSGDRRAMDSTRFDQFGRWSGVIRHPDGGIKVDDRTCYGTKDRSWGV 180 RT+ ++E RQTL + MD+TR DQFG WSG IR+ + VD T +G KDRSWG+ Sbjct: 121 PRTSCLEEGRQTLRNERHVVMDATRLDQFGFWSGWIRYDGKELVVDGATTFGIKDRSWGI 180 Query: 181 RNVGERDVEGAPMPP-RAVFFFWAPLVWDDHISHAIFFDGTQGEALVREGITAPLYRSEA 239 R VG+ GAP+ +AV F WAP+ W+D S A +F+ +G + P Y + Sbjct: 181 RPVGDAYTGGAPLAEFQAVHFNWAPIHWEDECSLAGWFEDGEGYQWHTDQGFLPHYANMD 240 Query: 240 EIPGVIDGLDRRM-ATARHRVKYVPNTRLAQSAEIDLVDIDGHTTTTALDPILKFQMKGL 298 EIPG D R H++ + TR A SA I + D G + +L+P++ +MKGL Sbjct: 241 EIPGTNDPAARTWNGKVEHKLNMIAGTRRASSAVITMNDKSGESLEISLEPVMLHRMKGL 300 Query: 299 GYGHPQWGQGMWKGELETGGESFDPSTLDPLARENVHVQQVVRARQGGQTGIGVLEQICF 358 GY HP+WG G W GEL GES+ S LDPLA EN+H+QQ+V AR G + G GVLEQ+ Sbjct: 301 GYQHPEWGHGKWHGELVISGESWTDSDLDPLALENLHIQQIVIARCGDKIGHGVLEQMHI 360 Query: 359 GPYRPAGFSEFLDGA 373 GP GF+++ DGA Sbjct: 361 GPSASHGFADWFDGA 375 >ref|YP_004523327.1| hypothetical protein JDM601_2073 [Mycobacterium sp. JDM601] gb|AEF36073.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length = 370 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 160/372 (43%), Positives = 220/372 (59%), Gaps = 8/372 (2%) Query: 1 VLNKLDDFPIHQTPEPIAVPSTSDRNVYDRTWFNGYTADGAYYFGIGIAIYPHRKILDCA 60 +L DD+P+HQ P +A + + YDR WFNGYT D +YF + + IYP+R ++D A Sbjct: 1 MLTPFDDYPVHQAPVALAHAGNGNPDHYDRFWFNGYTND--FYFAVALGIYPNRGVIDAA 58 Query: 61 FSVVERGGRQHCFYGSRRAPIERTEMQVGPFRLEVIEPMLRTRVVLDDNATGLACDLTFS 120 SVV G Q + S RAP++RT+ +GP R+E++EPM RVV+D GL D+TF+ Sbjct: 59 LSVVSDG-VQRSVFASGRAPLDRTQTAIGPIRIEIVEPMRINRVVVDAPEYGLGADMTFT 117 Query: 121 ARTAAIQEARQTLWSGDRRAMDSTRFDQFGRWSGVIRHPDGGIKVDDRTCYGTKDRSWGV 180 ARTA +E RQT + G R A+D TR Q GRW+G + D++T YGTKDRSWG+ Sbjct: 118 ARTAGYEEPRQTRYVGARLAIDMTRASQLGRWAGSLTVDGATNDFDNQTVYGTKDRSWGL 177 Query: 181 RNVGERDVEGAPMPPRA-VFFFWAPLVWDDHISHAIFFDGTQGEALVREGITAPLYRSEA 239 R VG AP P +FF WAPL +DD H + F+ G + + G P+ R Sbjct: 178 RPVG-LPASAAPEPSAGQIFFLWAPLNFDDIALHYLTFEDQTGASWAQSGAVLPILRPGD 236 Query: 240 EIPGVIDGLDRRMATARHRVKYVPNTRLAQSAEIDLVDIDGHTTTTALDPILKFQMKGLG 299 + G DG++ H + + P R ++ A +D D + L P+L F+MKG G Sbjct: 237 PVYGPQDGVEH--VDVSHTIDWAPGLRRSRGARLDFRRGDA-AESVELQPLLTFRMKGAG 293 Query: 300 YGHPQWGQGMWKGELETGGESFDPSTLDPLARENVHVQQVVRARQGGQTGIGVLEQICFG 359 Y HP+W G+W EL GGE S LD LA +N+HVQQV+RAR G +TGIGVLEQ+ G Sbjct: 294 YFHPRWSHGLWHEELAVGGEQTPVSELDNLALDNIHVQQVMRARWGDRTGIGVLEQLVIG 353 Query: 360 PYRPAGFSEFLD 371 P+ P+GF+ +D Sbjct: 354 PHAPSGFTGLVD 365 >ref|ZP_08152935.1| hypothetical protein HMPREF0724_10717 [Rhodococcus equi ATCC 33707] gb|EGD25503.1| hypothetical protein HMPREF0724_10717 [Rhodococcus equi ATCC 33707] Length = 369 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 158/378 (41%), Positives = 219/378 (57%), Gaps = 14/378 (3%) Query: 1 VLNKLDDFPIHQTPEPIAVPSTSDRNVYDRTWFNGYTADGAYYFGIGIAIYPHRKILDCA 60 +L DD+PIHQTP P+A N YDR WFNGY D +YF +G+ +YP+R I+D + Sbjct: 1 MLTPFDDYPIHQTPLPVAHAGDGHPNHYDRYWFNGYAED--FYFAVGLGVYPNRGIIDAS 58 Query: 61 FSVVERGGRQHCFYGSRRAPIERTEMQVGPFRLEVIEPMLRTRVVLDDNATGLACDLTFS 120 FSVV G Q + S AP++RTE ++GP +EV+EP+ RV +D GL DLT+ Sbjct: 59 FSVVHNG-VQRSVFASGLAPLDRTETKIGPISIEVVEPLRVNRVRVDAEEFGLVADLTYR 117 Query: 121 ARTAAIQEARQTLWSGDRRAMDSTRFDQFGRWSGVIRHPDGGIKVDDRTCYGTKDRSWGV 180 ART+A +E RQT+ SG MD TR Q G WSG +R D I +D R +GTKDRSWG+ Sbjct: 118 ARTSAHEEPRQTMHSGSSLMMDVTRLTQLGSWSGTLRSGDEDISLD-RPVFGTKDRSWGI 176 Query: 181 RNVGERDVEGAPMPPRA----VFFFWAPLVWDDHISHAIFFDGTQGEALVREGITAPLYR 236 R VG+ AP P+A VFF +APL ++D H + F+ +G + P+ Sbjct: 177 RPVGQP----APAAPQARKHQVFFLYAPLHFEDQCLHYMVFEDERGSRWAETSVVLPVIG 232 Query: 237 SEAEIPGVIDGLDRRMATARHRVKYVPNTRLAQSAEIDLVDIDGHTTTTALDPILKFQMK 296 + + G L H +++ P R ++ A + + DG L+P+L F+ + Sbjct: 233 DDGPVVGA--NLPVTHVHVEHEIRWAPGLRRSEGATLQVRGGDGDAGRIELEPLLTFRQR 290 Query: 297 GLGYGHPQWGQGMWKGELETGGESFDPSTLDPLARENVHVQQVVRARQGGQTGIGVLEQI 356 G+GY HP WG G W G+ GGE F LD A EN+HVQQVVR + G + G+GVLEQ+ Sbjct: 291 GVGYSHPTWGHGNWHGDFAVGGEEFAVEDLDNTAPENIHVQQVVRVQWGDRQGLGVLEQL 350 Query: 357 CFGPYRPAGFSEFLDGAK 374 GP+ P+GF + DGA+ Sbjct: 351 AIGPHAPSGFEGYFDGAR 368 >ref|YP_004005294.1| hypothetical protein REQ_04810 [Rhodococcus equi 103S] emb|CBH46608.1| conserved hypothetical protein [Rhodococcus equi 103S] Length = 369 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/378 (41%), Positives = 218/378 (57%), Gaps = 14/378 (3%) Query: 1 VLNKLDDFPIHQTPEPIAVPSTSDRNVYDRTWFNGYTADGAYYFGIGIAIYPHRKILDCA 60 +L DD+PIHQTP P+A N YDR WFNGY D YF +G+ +YP+R I+D + Sbjct: 1 MLTPFDDYPIHQTPLPVAHAGDGHPNHYDRYWFNGYAED--VYFAVGLGVYPNRGIIDAS 58 Query: 61 FSVVERGGRQHCFYGSRRAPIERTEMQVGPFRLEVIEPMLRTRVVLDDNATGLACDLTFS 120 FSVV G Q + S AP++RTE ++GP +EV+EP+ RV +D GL DLT+ Sbjct: 59 FSVVHNG-VQRSVFASGLAPLDRTETKIGPISIEVVEPLRVNRVRVDAEEFGLVADLTYR 117 Query: 121 ARTAAIQEARQTLWSGDRRAMDSTRFDQFGRWSGVIRHPDGGIKVDDRTCYGTKDRSWGV 180 ART+A +E RQT+ SG MD TR Q G WSG +R D I +D R +GTKDRSWG+ Sbjct: 118 ARTSAHEEPRQTMHSGSSLMMDVTRLTQLGTWSGTLRSGDEDISLD-RRVFGTKDRSWGI 176 Query: 181 RNVGERDVEGAPMPPRA----VFFFWAPLVWDDHISHAIFFDGTQGEALVREGITAPLYR 236 R VG+ AP P+A VFF +APL ++D H + F+ +G + P+ Sbjct: 177 RPVGQP----APAAPQARKHQVFFLYAPLHFEDRCLHYMVFEDERGSRWAETSVVLPVIG 232 Query: 237 SEAEIPGVIDGLDRRMATARHRVKYVPNTRLAQSAEIDLVDIDGHTTTTALDPILKFQMK 296 + + G L H +++ P R ++ A + + DG L+P+L F+ + Sbjct: 233 DDGPVVGA--NLPVTHVHVEHEIRWAPGLRRSEGATLQVRGGDGDAGRIELEPLLTFRQR 290 Query: 297 GLGYGHPQWGQGMWKGELETGGESFDPSTLDPLARENVHVQQVVRARQGGQTGIGVLEQI 356 G+GY HP WG G W G+ GGE F LD A EN+HVQQVVR + G + G+GVLEQ+ Sbjct: 291 GVGYSHPTWGHGNWHGDFAVGGEEFAVEDLDNTAPENIHVQQVVRVQWGDRQGLGVLEQL 350 Query: 357 CFGPYRPAGFSEFLDGAK 374 GP+ P+GF + DGA+ Sbjct: 351 AIGPHAPSGFEGYFDGAR 368 >ref|YP_004018926.1| hypothetical protein FraEuI1c_5067 [Frankia sp. EuI1c] gb|ADP83056.1| hypothetical protein FraEuI1c_5067 [Frankia sp. EuI1c] Length = 371 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 164/377 (43%), Positives = 216/377 (57%), Gaps = 17/377 (4%) Query: 1 VLNKLDDFPIHQTPEPIAVPSTSDRNVYDRTWFNGYTADGAYYFGIGIAIYPHRKILDCA 60 +L DD+P+HQT P+A + YDR WFNGY D YF + + +YP+R I+D A Sbjct: 1 MLIPFDDYPVHQTALPLAHAGDGHPDQYDRFWFNGY--DENMYFAVALGLYPNRGIIDAA 58 Query: 61 FSVVERGGRQHCFYGSRRAPIERTEMQVGPFRLEVIEPMLRTRVVLDDNATGLACDLTFS 120 FSVV G Q + S R P++RT+ ++GP +E++EPM R+V+ GL DLT + Sbjct: 59 FSVVHDG-VQRSVFASGRIPLDRTQTRIGPISIEIVEPMRVARIVVTAPEHGLVADLTAT 117 Query: 121 ARTAAIQEARQTLWSGDRRAMDSTRFDQFGRWSGVIRHPDGGIKVDDRTCYGTKDRSWGV 180 ART+A +E RQT +G MD TR Q WSG + I + T YGTKDRSWG+ Sbjct: 118 ARTSAYEEPRQTRHAGTVMVMDVTRATQLVTWSGTVSSGGTDIPIGVPT-YGTKDRSWGI 176 Query: 181 RNVGERDVEGAPMPPRAV----FFFWAPLVWDDHISHAIFFDGTQGEALVREGITAPLYR 236 R VG+ AP PR V FFWAPL + D H + F+ +G P+ Sbjct: 177 RGVGDP----APAAPRNVPPQLCFFWAPLNFPDQCLHYLRFEDARGVPWSETAAVLPVLG 232 Query: 237 SEAEIPGVIDGLDRRMATARHRVKYVPNTRLAQSAEIDLVDIDGHTTTTALDPILKFQMK 296 EA I G G+ RR+ H +++ P R ++ A I L G T L+PI F+MK Sbjct: 233 DEAPIFGAETGI-RRLDGVHHEIRWAPGLRRSEGATIRL----GAGETVELEPIRTFRMK 287 Query: 297 GLGYGHPQWGQGMWKGELETGGESFDPSTLDPLARENVHVQQVVRARQGGQTGIGVLEQI 356 G+GY HP WG G W GEL GGE+ + LD LA + VHVQQV+RA G +TG+GVLEQ+ Sbjct: 288 GVGYLHPTWGHGKWHGELAVGGEAHKTADLDVLAFDTVHVQQVMRATWGDRTGLGVLEQV 347 Query: 357 CFGPYRPAGFSEFLDGA 373 GPY P GF+E LDGA Sbjct: 348 VIGPYAPGGFTELLDGA 364