BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0029.p (444 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772020.1| preprotein translocase subunit SecY [Bradyrhizo... 863 0.0 ref|YP_001205125.1| preprotein translocase subunit SecY [Bradyrh... 853 0.0 ref|YP_001240957.1| preprotein translocase subunit SecY [Bradyrh... 851 0.0 ref|ZP_01046095.1| preprotein translocase SecY [Nitrobacter sp. ... 821 0.0 ref|YP_576847.1| preprotein translocase subunit SecY [Nitrobacte... 817 0.0 >ref|NP_772020.1| preprotein translocase subunit SecY [Bradyrhizobium japonicum USDA 110] dbj|BAC50645.1| preprotein translocase SECY subunit [Bradyrhizobium japonicum USDA 110] Length = 443 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/443 (95%), Positives = 435/443 (98%) Query: 1 MVSAAEQLAANLNFGQLAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 M SAAEQLAANLNFG AKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ Sbjct: 1 MASAAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 Query: 61 SGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGEAGRKTL 120 +GGILGMFNMFAGGGIHRMAIFALNIMPYISASII+QLLTTVSPQLEALKKEGEAGRKTL Sbjct: 61 AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKTL 120 Query: 121 NQYTRYLTVILALFQSYGIAIGLEGAGNVVSDPGMFFRISTAITLTGGTMFLMWLGEQIT 180 NQYTRYLTVILA FQSYGIA+GLEGAGNVVSDPGMFFR+STAITLTGGTMFLMWLGEQIT Sbjct: 121 NQYTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQIT 180 Query: 181 SRGIGNGISLIILAGIVAELPSALANMLELGRQGAMSTGLILIVIVMAVAVIAFIVFMER 240 SRGIGNGISLIIL+GIVAELP+ALANMLELGRQGAMSTGLIL+VI+MAVAVIAFIVFMER Sbjct: 181 SRGIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFMER 240 Query: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAG GP Sbjct: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGP 300 Query: 301 EWFQWITTQLSHGRPLFLFMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 EWFQWITTQL HGRPLFL MYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE Sbjct: 301 EWFQWITTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 Query: 361 RTAEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVSQV 420 RTAEYIDYVLSRITVLGA+YLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTV+QV Sbjct: 361 RTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVAQV 420 Query: 421 QGYLLAHQYEGLIRKSKLRGGRR 443 QGYLLAHQYEGLIRKSKLRG RR Sbjct: 421 QGYLLAHQYEGLIRKSKLRGRRR 443 >ref|YP_001205125.1| preprotein translocase subunit SecY [Bradyrhizobium sp. ORS 278] emb|CAL76888.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 278] Length = 443 Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/443 (94%), Positives = 434/443 (97%) Query: 1 MVSAAEQLAANLNFGQLAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 M SAAEQLAANLNFG LAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIW+ VFR+Q Sbjct: 1 MASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQ 60 Query: 61 SGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGEAGRKTL 120 +GGILGMFNMFAGGGIHRMAIFALNIMPYISASII+QLLTTVSPQLEALKKEGEAGRK L Sbjct: 61 AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKML 120 Query: 121 NQYTRYLTVILALFQSYGIAIGLEGAGNVVSDPGMFFRISTAITLTGGTMFLMWLGEQIT 180 NQYTRYLTVILA QSYGIA+GLEGAGNVV+DPG+FFR+STAITLTGGTMFLMWLGEQIT Sbjct: 121 NQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQIT 180 Query: 181 SRGIGNGISLIILAGIVAELPSALANMLELGRQGAMSTGLILIVIVMAVAVIAFIVFMER 240 SRGIGNGISLIIL+GIVAELPSALANMLELGRQGA+STGLILIVIVMAVAVIAFIVFMER Sbjct: 181 SRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER 240 Query: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP Sbjct: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 Query: 301 EWFQWITTQLSHGRPLFLFMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 EWFQWITTQL HGRPLFL +YLALI+FFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE Sbjct: 301 EWFQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 Query: 361 RTAEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVSQV 420 RTAEYIDYVLSRITVLGA+YLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTV+QV Sbjct: 361 RTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVAQV 420 Query: 421 QGYLLAHQYEGLIRKSKLRGGRR 443 QGYLLAHQYEGLIRKSKLRG RR Sbjct: 421 QGYLLAHQYEGLIRKSKLRGRRR 443 >ref|YP_001240957.1| preprotein translocase subunit SecY [Bradyrhizobium sp. BTAi1] gb|ABQ37051.1| protein translocase subunit secY/sec61 alpha [Bradyrhizobium sp. BTAi1] Length = 444 Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/443 (94%), Positives = 433/443 (97%) Query: 1 MVSAAEQLAANLNFGQLAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 M SAAEQLAANLNFG AKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIW+ VFR+Q Sbjct: 1 MASAAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQ 60 Query: 61 SGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGEAGRKTL 120 +GGILGMFNMFAGGGIHRMAIFALNIMPYISASII+QLLTTVSPQLEALKKEGEAGRK L Sbjct: 61 AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKML 120 Query: 121 NQYTRYLTVILALFQSYGIAIGLEGAGNVVSDPGMFFRISTAITLTGGTMFLMWLGEQIT 180 NQYTRYLTVILA QSYGIA+GLEGAGNVV+DPG+FFR+STAITLTGGTMFLMWLGEQIT Sbjct: 121 NQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQIT 180 Query: 181 SRGIGNGISLIILAGIVAELPSALANMLELGRQGAMSTGLILIVIVMAVAVIAFIVFMER 240 SRGIGNGISLIIL+GIVAELPSALANMLELGRQGA+STGLILIVIVMAVAVIAFIVFMER Sbjct: 181 SRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER 240 Query: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP Sbjct: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 Query: 301 EWFQWITTQLSHGRPLFLFMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 EWFQWITTQL HGRPLFL +YLALI+FFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE Sbjct: 301 EWFQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 Query: 361 RTAEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVSQV 420 RTAEYIDYVLSRITVLGA+YLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTV+QV Sbjct: 361 RTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVAQV 420 Query: 421 QGYLLAHQYEGLIRKSKLRGGRR 443 QGYLLAHQYEGLIRKSKLRG RR Sbjct: 421 QGYLLAHQYEGLIRKSKLRGRRR 443 >ref|ZP_01046095.1| preprotein translocase SecY [Nitrobacter sp. Nb-311A] gb|EAQ35899.1| preprotein translocase SecY [Nitrobacter sp. Nb-311A] Length = 443 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/443 (90%), Positives = 426/443 (96%) Query: 1 MVSAAEQLAANLNFGQLAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 MVSAAEQLAANLNF AKADELKKRIWFTLGALLVYRLGTYIPLPGIDP +W++VF SQ Sbjct: 1 MVSAAEQLAANLNFSAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWQKVFNSQ 60 Query: 61 SGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGEAGRKTL 120 +GGILGMFNMF+GGGI RMAIFALNIMPYISA+II+QLLT+VSP+LEALKKEGEAGRK + Sbjct: 61 AGGILGMFNMFSGGGIDRMAIFALNIMPYISAAIILQLLTSVSPKLEALKKEGEAGRKVI 120 Query: 121 NQYTRYLTVILALFQSYGIAIGLEGAGNVVSDPGMFFRISTAITLTGGTMFLMWLGEQIT 180 NQYTRYLTV+LA FQSYGIA+GL+GAGNVV++PGMFF +STAITLTGGTMFLMWLGEQIT Sbjct: 121 NQYTRYLTVVLAFFQSYGIAVGLQGAGNVVTNPGMFFLVSTAITLTGGTMFLMWLGEQIT 180 Query: 181 SRGIGNGISLIILAGIVAELPSALANMLELGRQGAMSTGLILIVIVMAVAVIAFIVFMER 240 SRGIGNGISLII+AGIVAELPSALANMLELGRQGA+STG+ILIV++M VAVIAFIVFMER Sbjct: 181 SRGIGNGISLIIMAGIVAELPSALANMLELGRQGALSTGIILIVLIMVVAVIAFIVFMER 240 Query: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 AQRRLLIQYPKRQVGNKMF+GQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAG GP Sbjct: 241 AQRRLLIQYPKRQVGNKMFDGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGP 300 Query: 301 EWFQWITTQLSHGRPLFLFMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 EWFQWI TQL HGRPLFL +Y+ALIVFF FFYTAIVFNPTETADNLKKHGGFIPGIRPGE Sbjct: 301 EWFQWINTQLGHGRPLFLVLYIALIVFFTFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 Query: 361 RTAEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVSQV 420 RTAEYIDYVLSRITV GAVYLA+VCLIPEILISYA+VPFYFGGTSLLIVVSVTMDTVSQV Sbjct: 361 RTAEYIDYVLSRITVPGAVYLAVVCLIPEILISYAAVPFYFGGTSLLIVVSVTMDTVSQV 420 Query: 421 QGYLLAHQYEGLIRKSKLRGGRR 443 QGYLLAHQYEGLI+KSKLRG RR Sbjct: 421 QGYLLAHQYEGLIKKSKLRGRRR 443 >ref|YP_576847.1| preprotein translocase subunit SecY [Nitrobacter hamburgensis X14] gb|ABE62387.1| protein translocase subunit secY/sec61 alpha [Nitrobacter hamburgensis X14] Length = 443 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/443 (89%), Positives = 423/443 (95%) Query: 1 MVSAAEQLAANLNFGQLAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQ 60 M SAAEQLAANLNF AKADELKKRIWFTLGALLVYRLGTYIPLPGIDP +W++VF SQ Sbjct: 1 MASAAEQLAANLNFSAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWQKVFNSQ 60 Query: 61 SGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGEAGRKTL 120 +GGILGMFNMF+GGGI RMAIFALNIMPYISA+II+QLLT+VSP+LEALKKEGEAGRK + Sbjct: 61 AGGILGMFNMFSGGGIDRMAIFALNIMPYISAAIILQLLTSVSPKLEALKKEGEAGRKVI 120 Query: 121 NQYTRYLTVILALFQSYGIAIGLEGAGNVVSDPGMFFRISTAITLTGGTMFLMWLGEQIT 180 NQYTRYLTV+LA FQSYGIA+GL+GAGNVV++PGMFF +STAITLTGGTMFLMWLGEQIT Sbjct: 121 NQYTRYLTVVLAFFQSYGIAVGLQGAGNVVTNPGMFFLVSTAITLTGGTMFLMWLGEQIT 180 Query: 181 SRGIGNGISLIILAGIVAELPSALANMLELGRQGAMSTGLILIVIVMAVAVIAFIVFMER 240 SRGIGNGISLII+AGIVAELPSALANMLELGRQGA+STG+ILIV++M V VIAFIVFMER Sbjct: 181 SRGIGNGISLIIMAGIVAELPSALANMLELGRQGALSTGIILIVLIMVVGVIAFIVFMER 240 Query: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP Sbjct: 241 AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP 300 Query: 301 EWFQWITTQLSHGRPLFLFMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 EWFQW+ TQL HGRP+FL +Y+ALIVFF FFYTAIVFNPTETADNLKKHGGFIPGIRPGE Sbjct: 301 EWFQWVNTQLGHGRPMFLILYIALIVFFTFFYTAIVFNPTETADNLKKHGGFIPGIRPGE 360 Query: 361 RTAEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVSQV 420 RTAEYIDYVLSRITV GA YLA+VCLIPEILISYA+VPFYFGGTSLLIVVSVTMDTV QV Sbjct: 361 RTAEYIDYVLSRITVPGAAYLAVVCLIPEILISYAAVPFYFGGTSLLIVVSVTMDTVQQV 420 Query: 421 QGYLLAHQYEGLIRKSKLRGGRR 443 QGYLLAHQYEGLI+KSKLRG RR Sbjct: 421 QGYLLAHQYEGLIKKSKLRGRRR 443