BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0021.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772028.1| 50S ribosomal protein L5 [Bradyrhizobium japoni... 360 6e-98 ref|YP_001240965.1| 50S ribosomal protein L5 [Bradyrhizobium sp.... 346 8e-94 ref|YP_001205117.1| 50S ribosomal protein L5 [Bradyrhizobium sp.... 346 8e-94 ref|ZP_01046103.1| Ribosomal protein L5 [Nitrobacter sp. Nb-311A... 343 5e-93 ref|YP_317989.1| 50S ribosomal protein L5 [Nitrobacter winograds... 343 7e-93 >ref|NP_772028.1| 50S ribosomal protein L5 [Bradyrhizobium japonicum USDA 110] sp|Q89J96.1|RL5_BRAJA RecName: Full=50S ribosomal protein L5 dbj|BAC50653.1| 50S ribosomal protein L5 [Bradyrhizobium japonicum USDA 110] Length = 185 Score = 360 bits (924), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 174/185 (94%), Positives = 177/185 (95%) Query: 1 MADTAYTPRLRAEYDKKIRGMMTEKFGYANVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 MA+ AYTPRLRAEYD KIR MTEKFGY NVMQVPRLDKVVLNMGVGDSVNDRKKAETAA Sbjct: 1 MAEAAYTPRLRAEYDAKIRTAMTEKFGYENVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 Query: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKTHMYEFIDRLVNVALPRVRDF 120 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRK MYEFIDRLV VALPRVRDF Sbjct: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKARMYEFIDRLVTVALPRVRDF 120 Query: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVSEARGMDITVCTTAKTDDEARALLTAFN 180 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKV+EARGMDITVCTTAKTD+EARALLTAFN Sbjct: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVTEARGMDITVCTTAKTDEEARALLTAFN 180 Query: 181 FPFRQ 185 FPFRQ Sbjct: 181 FPFRQ 185 >ref|YP_001240965.1| 50S ribosomal protein L5 [Bradyrhizobium sp. BTAi1] sp|A5ELL5.1|RL5_BRASB RecName: Full=50S ribosomal protein L5 gb|ABQ37059.1| LSU ribosomal protein L5P [Bradyrhizobium sp. BTAi1] Length = 185 Score = 346 bits (888), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 162/185 (87%), Positives = 175/185 (94%) Query: 1 MADTAYTPRLRAEYDKKIRGMMTEKFGYANVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 MA+TAYTPRLR EYD+KI+ +TEKFGYANVMQVPRLDKVVLNMG+G++VNDRKKAETAA Sbjct: 1 MAETAYTPRLRTEYDRKIKSALTEKFGYANVMQVPRLDKVVLNMGIGEAVNDRKKAETAA 60 Query: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKTHMYEFIDRLVNVALPRVRDF 120 A+L+ IAGQKA+VTYSR+AIATFKLRENQPIGCKVTLRK MYEFIDRL+NVALPRVRDF Sbjct: 61 ADLSLIAGQKAVVTYSRVAIATFKLRENQPIGCKVTLRKAKMYEFIDRLINVALPRVRDF 120 Query: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVSEARGMDITVCTTAKTDDEARALLTAFN 180 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDK E+ GMDITVCTTA TDDEARALLTAFN Sbjct: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKAGESWGMDITVCTTAATDDEARALLTAFN 180 Query: 181 FPFRQ 185 FPFRQ Sbjct: 181 FPFRQ 185 >ref|YP_001205117.1| 50S ribosomal protein L5 [Bradyrhizobium sp. ORS 278] sp|A4YSK4.1|RL5_BRASO RecName: Full=50S ribosomal protein L5 emb|CAL76880.1| 50S ribosomal subunit protein L5 [Bradyrhizobium sp. ORS 278] Length = 185 Score = 346 bits (888), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 162/185 (87%), Positives = 175/185 (94%) Query: 1 MADTAYTPRLRAEYDKKIRGMMTEKFGYANVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 MA+TAYTPRLR EYD+KI+ +TEKFGYANVMQVPRLDKVVLNMG+G++VNDRKKAETAA Sbjct: 1 MAETAYTPRLRTEYDRKIKSALTEKFGYANVMQVPRLDKVVLNMGIGEAVNDRKKAETAA 60 Query: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKTHMYEFIDRLVNVALPRVRDF 120 A+L+ IAGQKA+VTYSR+AIATFKLRENQPIGCKVTLRK MYEFIDRL+NVALPRVRDF Sbjct: 61 ADLSLIAGQKAVVTYSRVAIATFKLRENQPIGCKVTLRKAKMYEFIDRLINVALPRVRDF 120 Query: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVSEARGMDITVCTTAKTDDEARALLTAFN 180 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDK E+ GMDITVCTTA TDDEARALLTAFN Sbjct: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKAGESWGMDITVCTTATTDDEARALLTAFN 180 Query: 181 FPFRQ 185 FPFRQ Sbjct: 181 FPFRQ 185 >ref|ZP_01046103.1| Ribosomal protein L5 [Nitrobacter sp. Nb-311A] gb|EAQ35907.1| Ribosomal protein L5 [Nitrobacter sp. Nb-311A] Length = 185 Score = 343 bits (881), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 161/185 (87%), Positives = 174/185 (94%) Query: 1 MADTAYTPRLRAEYDKKIRGMMTEKFGYANVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 MA+TAY PRLRAEYDK IR +TE+FGY NVMQVPRLDKVVLNMG+G++VNDRKKAETAA Sbjct: 1 MAETAYVPRLRAEYDKSIRARLTEQFGYVNVMQVPRLDKVVLNMGIGEAVNDRKKAETAA 60 Query: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKTHMYEFIDRLVNVALPRVRDF 120 A+L+ IAGQKA+VTYSR+AI+TFKLRENQPIGCKVTLRK MYEFIDRLVNVALPRVRDF Sbjct: 61 ADLSLIAGQKAVVTYSRVAISTFKLRENQPIGCKVTLRKAKMYEFIDRLVNVALPRVRDF 120 Query: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVSEARGMDITVCTTAKTDDEARALLTAFN 180 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDK E+ GMDITVCTTA+TDDEARALLTAFN Sbjct: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKAGESWGMDITVCTTAQTDDEARALLTAFN 180 Query: 181 FPFRQ 185 FPFRQ Sbjct: 181 FPFRQ 185 >ref|YP_317989.1| 50S ribosomal protein L5 [Nitrobacter winogradskyi Nb-255] sp|Q3SSV4.1|RL5_NITWN RecName: Full=50S ribosomal protein L5 gb|ABA04637.1| LSU ribosomal protein L5P [Nitrobacter winogradskyi Nb-255] Length = 185 Score = 343 bits (880), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 160/185 (86%), Positives = 174/185 (94%) Query: 1 MADTAYTPRLRAEYDKKIRGMMTEKFGYANVMQVPRLDKVVLNMGVGDSVNDRKKAETAA 60 MA+TAY PRLRAEYDK IR +TE+FGY NVMQVPRLDKVVLNMG+G++VNDRKKAE AA Sbjct: 1 MAETAYVPRLRAEYDKSIRSRLTEQFGYVNVMQVPRLDKVVLNMGIGEAVNDRKKAEAAA 60 Query: 61 AELTQIAGQKAIVTYSRIAIATFKLRENQPIGCKVTLRKTHMYEFIDRLVNVALPRVRDF 120 +L+ IAGQKA+VTYSR+AI+TFKLRENQPIGCKVTLRKT MYEFIDRLVNVALPRVRDF Sbjct: 61 GDLSLIAGQKAVVTYSRVAISTFKLRENQPIGCKVTLRKTKMYEFIDRLVNVALPRVRDF 120 Query: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVSEARGMDITVCTTAKTDDEARALLTAFN 180 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKV E+ GMD+TVCTTA+TDDEARALLTAFN Sbjct: 121 RGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKVGESWGMDVTVCTTAQTDDEARALLTAFN 180 Query: 181 FPFRQ 185 FPFRQ Sbjct: 181 FPFRQ 185