BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0012.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240974.1| 50S ribosomal protein L2 [Bradyrhizobium sp.... 508 e-142 ref|YP_317980.1| 50S ribosomal protein L2 [Nitrobacter winograds... 505 e-141 ref|YP_001205108.1| 50S ribosomal protein L2 [Bradyrhizobium sp.... 504 e-141 ref|YP_576830.1| 50S ribosomal protein L2 [Nitrobacter hamburgen... 503 e-140 ref|YP_485914.1| 50S ribosomal protein L2 [Rhodopseudomonas palu... 499 e-139 >ref|YP_001240974.1| 50S ribosomal protein L2 [Bradyrhizobium sp. BTAi1] sp|A5ELM4.1|RL2_BRASB RecName: Full=50S ribosomal protein L2 gb|ABQ37068.1| LSU ribosomal protein L2P [Bradyrhizobium sp. BTAi1] Length = 277 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 256/277 (92%), Positives = 267/277 (96%) Query: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKLGNGGRNNTGRITVRFRGGGHKK 60 MALKTFNPTTPGQRQLVMVDRSALYKGKPVK LTEGKL +GGRNNTGRITVRF GGGHK+ Sbjct: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKALTEGKLSSGGRNNTGRITVRFLGGGHKQ 60 Query: 61 AYRTVDFRRDKVDMPAVVERLEYDPNRTAFIALIKYQDGELAYILAPQRLAAGDTVVAGN 120 +YR VDF+RDKVD+PA VERLEYDPNRTAFIAL+KYQDGELAYILAPQRLA GDT+VAGN Sbjct: 61 SYRMVDFKRDKVDVPATVERLEYDPNRTAFIALVKYQDGELAYILAPQRLAVGDTIVAGN 120 Query: 121 YVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQLARSAGTYAQIVGRDQDYVIIRLNSGE 180 YVDVKPGNVMPLGNMPVGTIVHNIE+KIGKGGQLARSAGTYAQIVGRDQDYVI+RLNSGE Sbjct: 121 YVDVKPGNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQIVGRDQDYVIVRLNSGE 180 Query: 181 QRLVHGRCRGTIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 QRLVHGRCRGTIGAVSNPDHMN SIGKAGR RW+G RPHNRGV MNPIDHPHGGGEGRTS Sbjct: 181 QRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRTS 240 Query: 241 GGRHPVTPWGKPTKGKKTRTNKSTNKFILLSRHKRKK 277 GGRHPVTPWGKPTKGKKTRTNKST+KFILLSRHKRKK Sbjct: 241 GGRHPVTPWGKPTKGKKTRTNKSTDKFILLSRHKRKK 277 >ref|YP_317980.1| 50S ribosomal protein L2 [Nitrobacter winogradskyi Nb-255] sp|Q3SSW3.1|RL2_NITWN RecName: Full=50S ribosomal protein L2 gb|ABA04628.1| LSU ribosomal protein L2P [Nitrobacter winogradskyi Nb-255] Length = 277 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 255/277 (92%), Positives = 267/277 (96%) Query: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKLGNGGRNNTGRITVRFRGGGHKK 60 MALKT+NPTTPGQRQLVMVDRSALYKGKPVKTLTEGK G GGRNNTGRITVRFRGGGHK+ Sbjct: 1 MALKTYNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKRGKGGRNNTGRITVRFRGGGHKQ 60 Query: 61 AYRTVDFRRDKVDMPAVVERLEYDPNRTAFIALIKYQDGELAYILAPQRLAAGDTVVAGN 120 AYR VDF+R K D+PAVVERLEYDPNRTAFIALIKYQDGE AYILAPQR+A GDTVVAGN Sbjct: 61 AYRNVDFKRGKTDVPAVVERLEYDPNRTAFIALIKYQDGEQAYILAPQRMAVGDTVVAGN 120 Query: 121 YVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQLARSAGTYAQIVGRDQDYVIIRLNSGE 180 YVDVKPGNVMPLGNMPVGTIVHN+E+KIGKGGQLARSAGTYAQIVGRDQDYVI+RLNSGE Sbjct: 121 YVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGRDQDYVILRLNSGE 180 Query: 181 QRLVHGRCRGTIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 QRLVHGRCRG IGAVSNPDHMN S+GKAGRTRW+G RPHNRGVVMNPIDHPHGGGEGRTS Sbjct: 181 QRLVHGRCRGAIGAVSNPDHMNTSVGKAGRTRWMGRRPHNRGVVMNPIDHPHGGGEGRTS 240 Query: 241 GGRHPVTPWGKPTKGKKTRTNKSTNKFILLSRHKRKK 277 GGRHPVTPWGKPTKGKKTR+NKSTNKFIL+SRHKRKK Sbjct: 241 GGRHPVTPWGKPTKGKKTRSNKSTNKFILISRHKRKK 277 >ref|YP_001205108.1| 50S ribosomal protein L2 [Bradyrhizobium sp. ORS 278] sp|A4YSJ5.1|RL2_BRASO RecName: Full=50S ribosomal protein L2 emb|CAL76871.1| 50S ribosomal subunit protein L2 [Bradyrhizobium sp. ORS 278] Length = 277 Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust. Identities = 254/277 (91%), Positives = 266/277 (96%) Query: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKLGNGGRNNTGRITVRFRGGGHKK 60 MALKTFNPTTPGQRQLVMVDRSALYKGKPVK LTEGK +GGRNNTGRITVRF GGGHK+ Sbjct: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKALTEGKQSSGGRNNTGRITVRFLGGGHKQ 60 Query: 61 AYRTVDFRRDKVDMPAVVERLEYDPNRTAFIALIKYQDGELAYILAPQRLAAGDTVVAGN 120 +YRTVDF+RDKVD+PA VERLEYDPNRTAFIAL+KYQDGELAYILAPQRLA GDT+VAGN Sbjct: 61 SYRTVDFKRDKVDVPATVERLEYDPNRTAFIALVKYQDGELAYILAPQRLAVGDTIVAGN 120 Query: 121 YVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQLARSAGTYAQIVGRDQDYVIIRLNSGE 180 YVDVKPGNVMPLGNMPVGTIVHNIE+KIGKGGQLARSAGTYAQ+VGRD DYVI+RLNSGE Sbjct: 121 YVDVKPGNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQLVGRDHDYVIVRLNSGE 180 Query: 181 QRLVHGRCRGTIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 QRLVHGRCRGTIGAVSNPDHMN SIGKAGR RW+G RPHNRGV MNPIDHPHGGGEGRTS Sbjct: 181 QRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRTS 240 Query: 241 GGRHPVTPWGKPTKGKKTRTNKSTNKFILLSRHKRKK 277 GGRHPVTPWGKPTKGKKTRTNKST+KFILLSRHKRKK Sbjct: 241 GGRHPVTPWGKPTKGKKTRTNKSTDKFILLSRHKRKK 277 >ref|YP_576830.1| 50S ribosomal protein L2 [Nitrobacter hamburgensis X14] sp|Q1QN27.1|RL2_NITHX RecName: Full=50S ribosomal protein L2 gb|ABE62370.1| LSU ribosomal protein L2P [Nitrobacter hamburgensis X14] Length = 277 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 255/277 (92%), Positives = 265/277 (95%) Query: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKLGNGGRNNTGRITVRFRGGGHKK 60 MALKTFNPTTPGQRQLVMVDRSALYKGKPVK LTEGK G GGRNNTGRITVRFRGGGHK+ Sbjct: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKALTEGKRGKGGRNNTGRITVRFRGGGHKQ 60 Query: 61 AYRTVDFRRDKVDMPAVVERLEYDPNRTAFIALIKYQDGELAYILAPQRLAAGDTVVAGN 120 AYR VDF+R K D+PA+VERLEYDPNRTAFIALIKYQDGE AYILAPQRLA GDTVVAGN Sbjct: 61 AYRNVDFKRGKEDVPAIVERLEYDPNRTAFIALIKYQDGEQAYILAPQRLAVGDTVVAGN 120 Query: 121 YVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQLARSAGTYAQIVGRDQDYVIIRLNSGE 180 YVDVKPGNVMPLGNMPVGTIVHN+E+KIGKGGQLARSAGTYAQIVGRD DYVI+RLNSGE Sbjct: 121 YVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGRDHDYVILRLNSGE 180 Query: 181 QRLVHGRCRGTIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 QRLVHGRCRG IGAVSNPDHMN SIGKAGRTRW+G RPHNRGVVMNPIDHPHGGGEGRTS Sbjct: 181 QRLVHGRCRGAIGAVSNPDHMNTSIGKAGRTRWMGRRPHNRGVVMNPIDHPHGGGEGRTS 240 Query: 241 GGRHPVTPWGKPTKGKKTRTNKSTNKFILLSRHKRKK 277 GGRHPVTPWGKPTKGKKTR+NKSTNKFIL+SRHKRKK Sbjct: 241 GGRHPVTPWGKPTKGKKTRSNKSTNKFILISRHKRKK 277 >ref|YP_485914.1| 50S ribosomal protein L2 [Rhodopseudomonas palustris HaA2] sp|Q2IXQ7.1|RL2_RHOP2 RecName: Full=50S ribosomal protein L2 gb|ABD07003.1| LSU ribosomal protein L2P [Rhodopseudomonas palustris HaA2] Length = 278 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 251/277 (90%), Positives = 264/277 (95%) Query: 1 MALKTFNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKLGNGGRNNTGRITVRFRGGGHKK 60 MALK +NPTTPGQRQLVMVDRSALYKGKPVKTLTEGK NGGRNNTGRITVRFRGGGHKK Sbjct: 1 MALKKYNPTTPGQRQLVMVDRSALYKGKPVKTLTEGKHSNGGRNNTGRITVRFRGGGHKK 60 Query: 61 AYRTVDFRRDKVDMPAVVERLEYDPNRTAFIALIKYQDGELAYILAPQRLAAGDTVVAGN 120 YR VDF+R KVD+PA VERLEYDPNRTAFIALIKY+DGE AYILAPQRLA GDTV+AG Sbjct: 61 TYRLVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYEDGEQAYILAPQRLAVGDTVIAGA 120 Query: 121 YVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQLARSAGTYAQIVGRDQDYVIIRLNSGE 180 YVDVKPGNVMPLGNMP+GTIVHN+ELKIGKGGQ+ARSAGTYAQ+VGRD DYVI+RLNSGE Sbjct: 121 YVDVKPGNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRDHDYVIMRLNSGE 180 Query: 181 QRLVHGRCRGTIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 QRLVHGRC TIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS Sbjct: 181 QRLVHGRCTATIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTS 240 Query: 241 GGRHPVTPWGKPTKGKKTRTNKSTNKFILLSRHKRKK 277 GGRHPVTPWGKPTKGKKTR+NKST+KFIL+SRHKRKK Sbjct: 241 GGRHPVTPWGKPTKGKKTRSNKSTDKFILISRHKRKK 277