BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0247.0008.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205103.1| elongation factor Tu [Bradyrhizobium sp. ORS... 562 e-158 ref|YP_533309.1| elongation factor Tu [Rhodopseudomonas palustri... 553 e-156 ref|YP_004108483.1| translation elongation factor Tu [Rhodopseud... 553 e-155 ref|NP_948591.1| elongation factor Tu [Rhodopseudomonas palustri... 550 e-154 ref|YP_485882.1| elongation factor Tu [Rhodopseudomonas palustri... 548 e-154 >ref|YP_001205103.1| elongation factor Tu [Bradyrhizobium sp. ORS 278] ref|YP_001240979.1| elongation factor Tu [Bradyrhizobium sp. BTAi1] sp|A5ELM9.1|EFTU_BRASB RecName: Full=Elongation factor Tu; Short=EF-Tu sp|A4YSJ0.1|EFTU_BRASO RecName: Full=Elongation factor Tu; Short=EF-Tu emb|CAL76866.1| Elongation factor Tu (EF-Tu) [Bradyrhizobium sp. ORS 278] gb|ABQ37073.1| translation elongation factor 1A (EF-1A/EF-Tu) [Bradyrhizobium sp. BTAi1] Length = 396 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 278/283 (98%), Positives = 280/283 (98%) Query: 20 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 79 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG Sbjct: 114 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 173 Query: 80 SALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 139 SALAALED DKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR Sbjct: 174 SALAALEDSDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 233 Query: 140 VERGVIKVGEEIEIVGIRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 199 VERGVIKVGEEIEIVGIR TQKT VTGVEMFRKLLDQGQAGDNIGALLRGTKRE+VERGQ Sbjct: 234 VERGVIKVGEEIEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQ 293 Query: 200 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 259 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV Sbjct: 294 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 353 Query: 260 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 302 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVA+IIE Sbjct: 354 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396 >ref|YP_533309.1| elongation factor Tu [Rhodopseudomonas palustris BisB18] sp|Q211E6.1|EFTU_RHOPB RecName: Full=Elongation factor Tu; Short=EF-Tu gb|ABD88990.1| translation elongation factor 1A (EF-1A/EF-Tu) [Rhodopseudomonas palustris BisB18] Length = 396 Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust. Identities = 270/283 (95%), Positives = 279/283 (98%) Query: 20 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 79 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVE+EVRELLSKY+FPGD IPI+KG Sbjct: 114 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVEMEVRELLSKYDFPGDDIPIVKG 173 Query: 80 SALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 139 SALAALE+KD KLGHDAILELM+ VD YIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR Sbjct: 174 SALAALENKDPKLGHDAILELMKAVDAYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 233 Query: 140 VERGVIKVGEEIEIVGIRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 199 VERG++KVGEEIEIVG+RDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ Sbjct: 234 VERGIVKVGEEIEIVGLRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 293 Query: 200 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 259 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV Sbjct: 294 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 353 Query: 260 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 302 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVA+IIE Sbjct: 354 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396 >ref|YP_004108483.1| translation elongation factor Tu [Rhodopseudomonas palustris DX-1] ref|YP_004108507.1| translation elongation factor Tu [Rhodopseudomonas palustris DX-1] gb|ADU43750.1| translation elongation factor Tu [Rhodopseudomonas palustris DX-1] gb|ADU43774.1| translation elongation factor Tu [Rhodopseudomonas palustris DX-1] Length = 396 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 271/283 (95%), Positives = 277/283 (97%) Query: 20 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 79 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVE+EVRELLSKY+FPGD IPI+KG Sbjct: 114 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVEMEVRELLSKYDFPGDDIPIVKG 173 Query: 80 SALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 139 SALAALE+ D+KLGHDAILELMR VD YIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR Sbjct: 174 SALAALENSDQKLGHDAILELMRQVDAYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 233 Query: 140 VERGVIKVGEEIEIVGIRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 199 VERGVIKVGEEIEIVGIRDTQKT TGVEMFRKLLDQGQAGDNIGALLRGTKRE+VERGQ Sbjct: 234 VERGVIKVGEEIEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQ 293 Query: 200 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 259 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV Sbjct: 294 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 353 Query: 260 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 302 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE Sbjct: 354 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 396 >ref|NP_948591.1| elongation factor Tu [Rhodopseudomonas palustris CGA009] ref|NP_948622.1| elongation factor Tu [Rhodopseudomonas palustris CGA009] ref|YP_001992644.1| elongation factor Tu [Rhodopseudomonas palustris TIE-1] ref|YP_001992678.1| elongation factor Tu [Rhodopseudomonas palustris TIE-1] sp|Q6N4Q4.1|EFTU_RHOPA RecName: Full=Elongation factor Tu; Short=EF-Tu emb|CAE28693.1| elongation factor Tu [Rhodopseudomonas palustris CGA009] emb|CAE28724.1| elongation factor Tu [Rhodopseudomonas palustris CGA009] gb|ACF02169.1| translation elongation factor Tu [Rhodopseudomonas palustris TIE-1] gb|ACF02203.1| translation elongation factor Tu [Rhodopseudomonas palustris TIE-1] Length = 396 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 268/283 (94%), Positives = 276/283 (97%) Query: 20 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 79 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVE+EVRELLSKY+FPGD IPI+KG Sbjct: 114 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVEMEVRELLSKYDFPGDDIPIVKG 173 Query: 80 SALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 139 SALAALE+ D KLGHDAILELMR VD YIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR Sbjct: 174 SALAALENSDAKLGHDAILELMRQVDAYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 233 Query: 140 VERGVIKVGEEIEIVGIRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 199 VERG++KVG+EIEIVGIRDTQKT TGVEMFRKLLDQGQAGDNIGALLRGTKRE+VERGQ Sbjct: 234 VERGILKVGDEIEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQ 293 Query: 200 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 259 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV Sbjct: 294 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 353 Query: 260 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 302 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE Sbjct: 354 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 396 >ref|YP_485882.1| elongation factor Tu [Rhodopseudomonas palustris HaA2] ref|YP_485909.1| elongation factor Tu [Rhodopseudomonas palustris HaA2] sp|Q2IXR2.1|EFTU_RHOP2 RecName: Full=Elongation factor Tu; Short=EF-Tu gb|ABD06971.1| translation elongation factor Tu [Rhodopseudomonas palustris HaA2] gb|ABD06998.1| translation elongation factor 1A (EF-1A/EF-Tu) [Rhodopseudomonas palustris HaA2] Length = 396 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 267/283 (94%), Positives = 276/283 (97%) Query: 20 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVELEVRELLSKYEFPGDKIPIIKG 79 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVE+EVRELLSKY+FPGD IPIIKG Sbjct: 114 PQTREHILLARQVGVPALVVFLNKCDMVDDPELLELVEMEVRELLSKYDFPGDDIPIIKG 173 Query: 80 SALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 139 SALAALE+ D+KLGHDAILELM+ VD YIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR Sbjct: 174 SALAALENSDQKLGHDAILELMKAVDAYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGR 233 Query: 140 VERGVIKVGEEIEIVGIRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQ 199 VERG++KVGEEIEIVGIRDTQKT TGVEMFRKLLDQGQAGDNIG LLRGTKRE+VERGQ Sbjct: 234 VERGIVKVGEEIEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGCLLRGTKREDVERGQ 293 Query: 200 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 259 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV Sbjct: 294 VLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMV 353 Query: 260 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 302 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVA+IIE Sbjct: 354 MPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396