BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0052.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003167996.1| hypothetical protein CAP2UW1_2786 [Candidatu... 300 3e-79 ref|YP_725780.1| hypothetical protein H16_A1272 [Ralstonia eutro... 265 9e-69 ref|YP_004685093.1| hypothetical protein CNE_1c12580 [Cupriavidu... 265 1e-68 ref|YP_846439.1| hypothetical protein Sfum_2323 [Syntrophobacter... 263 6e-68 ref|YP_001863240.1| hypothetical protein Bphy_7194 [Burkholderia... 259 8e-67 >ref|YP_003167996.1| hypothetical protein CAP2UW1_2786 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV36067.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 521 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 163/267 (61%), Positives = 190/267 (71%), Gaps = 14/267 (5%) Query: 53 IEQLVAPIALYPDALLSQILMASTYPLEVVEAARWSQDNKTVTGKALEDAMQKQSWDPSV 112 +++L+APIALYPD LL+QILMASTYPLE+VEAARW + N V+GKALEDAM KQSWDP+V Sbjct: 48 LDRLLAPIALYPDPLLAQILMASTYPLEIVEAARWVKANPKVSGKALEDAMAKQSWDPAV 107 Query: 113 KALAAVPQVLQMMNDKLDWTQHLGDAFLAQEQDVMSAVQTLRQRAEAAGNLKSTPQQKVI 172 K+LA VPQVLQ MN+ LDWTQ LGDAFLAQ+QDVM+ VQ LR +A+A GNLKSTPQQ V+ Sbjct: 108 KSLAVVPQVLQQMNENLDWTQKLGDAFLAQQQDVMNTVQGLRAKADATGNLKSTPQQ-VV 166 Query: 173 KSAPPAGVTAPSGMQQAISIEPVDPDQYYVPVYDPGVVYGAWDYPDYQPFYWSPPGYVAA 232 K T G Q +EP PD YVP Y+P VVYG+W YP + P Sbjct: 167 K-------TQTQGSQTIYVVEPAKPDVVYVPTYNPTVVYGSWWYPAPPYAVYPPAYVYPP 219 Query: 233 GVIGFTASVAVGAAIWGGCNW-WGR-NVYVNVNRYNQFNRTNIRNTNWAHNPAHRGGVAY 290 G + F V VGAAIWG C+W WGR +V VNVNRYN FNRTNI N+NW+HN HR GVAY Sbjct: 220 G-LAFATGVVVGAAIWGACSWGWGRSSVDVNVNRYNSFNRTNISNSNWSHNVDHRRGVAY 278 Query: 291 RDAGVARRFG-SGNTPAA--REALRNR 314 RD GVA ++ GN AA RE R R Sbjct: 279 RDQGVANQYNRGGNAQAAKSREEFRGR 305 >ref|YP_725780.1| hypothetical protein H16_A1272 [Ralstonia eutropha H16] emb|CAJ92412.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 473 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 176/366 (48%), Positives = 216/366 (59%), Gaps = 27/366 (7%) Query: 52 QIEQLVAPIALYPDALLSQILMASTYPLEVVEAARWSQDNKTVTGKALEDAMQKQSWDPS 111 ++E LVAPIALYPD++LSQ+LMASTYPLE+V AARW + N V G A A+ Q WD S Sbjct: 43 ELEALVAPIALYPDSVLSQVLMASTYPLEIVHAARWVKANPKVKGDAAVKAVADQPWDVS 102 Query: 112 VKALAAVPQVLQMMNDKLDWTQHLGDAFLAQEQDVMSAVQTLRQRAEAAGNLKSTPQQKV 171 VK+L A PQVL+ MNDKLDWTQ LGDAFLAQE+DV++AVQ LR +A+ +GNLK+T QQKV Sbjct: 103 VKSLVAFPQVLEPMNDKLDWTQKLGDAFLAQEKDVLAAVQRLRNKAQQSGNLKTTEQQKV 162 Query: 172 IKSAPPAGVTAPSGMQQAISIEPVDPDQYYVPVYDPGVVYGAWDYPDYQPFYWSPPGYVA 231 I PA AP G+Q + IEP DP YVP Y+P VVYG+W YP Y P+YW P Sbjct: 163 I--VEPATTAAP-GVQTVVRIEPADPQVIYVPAYNPTVVYGSWGYPSYPPYYWPPYPAYY 219 Query: 232 AG---VIGFTASVAVGA--AIWGGCNWWGRNVYVNVNRYN----QFNRTNIR-NTNWAHN 281 G GF + + A AI+G CNW G +V +NVNR F+RT ++ W H+ Sbjct: 220 PGAALATGFAWGIGLAAAGAIFGNCNWGGGDVNINVNRATNIDRNFDRTKVQAGGRWQHD 279 Query: 282 PAHRGGVAYRDAGVARRFGSGNTPAA--REALRNRTGGPGGR---VSNAGAGRARTAVSQ 336 +HR GVAYRD +F S + P R R R GG G V + G+ R Sbjct: 280 ASHRQGVAYRDNATREKF-SRDVPGGDRRNEFRGREGGAGVSDRAVRDRAGGQERPGAGD 338 Query: 337 RAGNRGASVSRRASSRNVTRAHTRAGNRAAISHRSVTHTR--VSGRVHAGGRPAAM---R 391 RAG+R RA R RA R G+RA +S R+ R VS R A R R Sbjct: 339 RAGDRAGD---RAGDRVGDRAGERGGDRAGVSDRAGVSDRGGVSDRAGASDRAGTADRSR 395 Query: 392 GGGMRA 397 G G RA Sbjct: 396 GAGERA 401 >ref|YP_004685093.1| hypothetical protein CNE_1c12580 [Cupriavidus necator N-1] gb|AEI76612.1| hypothetical protein CNE_1c12580 [Cupriavidus necator N-1] Length = 468 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 194/419 (46%), Positives = 233/419 (55%), Gaps = 58/419 (13%) Query: 38 APAPGPTASKLPNGQIEQLVAPIALYPDALLSQILMASTYPLEVVEAARWSQDNKTVTGK 97 AP P PT ++E LVAPIALYPD++LSQ+LMASTYPLE+V AARW + N V G Sbjct: 32 APKPPPT---FKAEELEALVAPIALYPDSVLSQVLMASTYPLEIVHAARWVKANPKVKGD 88 Query: 98 ALEDAMQKQSWDPSVKALAAVPQVLQMMNDKLDWTQHLGDAFLAQEQDVMSAVQTLRQRA 157 A A+ Q WD SVK+L A PQVL+ MNDKLDWTQ LGDAFLAQE+DV++AVQ LR +A Sbjct: 89 AAVKAVADQPWDVSVKSLVAFPQVLEPMNDKLDWTQKLGDAFLAQEKDVLAAVQRLRNKA 148 Query: 158 EAAGNLKSTPQQKVIKSAPPAGVTAPSGMQQAISIEPVDPDQYYVPVYDPGVVYGAWDYP 217 + +GNLKST QQ VI PA TA G+Q + IEP DP YVP Y+P VVYG+W YP Sbjct: 149 QQSGNLKSTEQQNVI--VEPA-TTAALGVQTVVRIEPADPQVIYVPAYNPTVVYGSWGYP 205 Query: 218 DYQPFYWSPPGYVAAG---VIGFTASVAVGA--AIWGGCNWWGRNVYVNVNRYN----QF 268 Y P+YW P G GF V + A AI+G CNW G +V VNVNR F Sbjct: 206 SYPPYYWPPYPAYYPGAALATGFAWGVGLAAAGAIFGNCNWGGGDVNVNVNRATNIDRNF 265 Query: 269 NRTNIRN-TNWAHNPAHRGGVAYRDAGVARRFGSGNTPAA--REALRNRTGGPGGRVSNA 325 +RT +++ W H+ HR GVAYRD +F S + P R R R GG G VS+ Sbjct: 266 DRTKVQSGGRWQHDAGHRQGVAYRDNATREKF-SRDVPGGDRRNEFRGREGGAG--VSDR 322 Query: 326 GA-----GRARTAVSQRAGNR-GASVSRRASSRNVTRAHTRAGNRAAISHRSVTHTRVSG 379 A G+ R RAG R G RA + RA R +RA +S R+ VS Sbjct: 323 AARDRAGGQDRAGAGDRAGERAGDRAGDRAGDQVGDRAGERGSDRAGVSDRA----GVSD 378 Query: 380 RVHAGGRPAAMRGGGMRA-----------------GVGG-------FHRGGGGMRAGGG 414 R A R RGGG RA GVGG F RG M++ GG Sbjct: 379 RAGAADRS---RGGGERATTVADRGGGGGRDNAFQGVGGGAASQRDFDRGRSSMQSAGG 434 >ref|YP_846439.1| hypothetical protein Sfum_2323 [Syntrophobacter fumaroxidans MPOB] gb|ABK18004.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB] Length = 421 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 158/338 (46%), Positives = 200/338 (59%), Gaps = 29/338 (8%) Query: 52 QIEQLVAPIALYPDALLSQILMASTYPLEVVEAARWSQDNKTVTGKALEDAMQKQSWDPS 111 QI+Q+ AP+ALYPD+LLSQILMASTYPLEVVEA RWS+ N+ + GK L+DA+++Q WDPS Sbjct: 37 QIDQMTAPVALYPDSLLSQILMASTYPLEVVEADRWSKANQGLKGKQLDDAVEQQGWDPS 96 Query: 112 VKALAAVPQVLQMMNDKLDWTQHLGDAFLAQEQDVMSAVQTLRQRAEAAGNLKSTPQQKV 171 VK+L PQVL MM+ KLDWT LGD FL QEQDVM ++Q LR++A+A GNLKST +QKV Sbjct: 97 VKSLVYFPQVLDMMSQKLDWTSKLGDTFLGQEQDVMDSIQRLRKQAKAQGNLKSTKEQKV 156 Query: 172 IKSAPPAGVTAPSGMQQAISIEPVDPDQYYVPVYDPGVVYGAWDYPDYQPFYWSPPGYVA 231 + Q IS+EP DP YVPVY+P VVYGAW YP Y P PPGYVA Sbjct: 157 VVQ------------QDVISVEPADPQVVYVPVYNPTVVYGAWAYPAYPPAVLYPPGYVA 204 Query: 232 A-GVIGFTASVAVGAAIWGGCNWWGRNVYVNVNRYNQFNRTNIRN---------TNWAHN 281 A G + FTA GA ++GG NW NV +N N + N N R W H+ Sbjct: 205 APGFVSFTAGFFAGAYLYGGFNWGTHNVIINNNNFYNRNVWNNRRGPYPGPPHGHYWNHD 264 Query: 282 PAHRGGVAYRDAGVARRFGSGNTPAAREALRNRTGGPGGRVSNAGAGRARTAVSQRAGNR 341 P HR V YR+A ++R+ A R+A+R ++N G AR+ + A N Sbjct: 265 PYHRQNVPYRNANASQRYNQSQANARRDAVRTNPST----LNNRGYDAARSNQPKSAMNV 320 Query: 342 GASVSRRASS---RNVTRAHTRAGNRAAISHRSVTHTR 376 SR+ + + R AG R S S T+ R Sbjct: 321 DKGQSRQNQAFGGLDNGRKDQFAGQRGQASRNSPTYQR 358 >ref|YP_001863240.1| hypothetical protein Bphy_7194 [Burkholderia phymatum STM815] gb|ACC76194.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 462 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 175/390 (44%), Positives = 219/390 (56%), Gaps = 38/390 (9%) Query: 1 MRRLTFASAALAVGLMLG-GPAYAQTPADQKPAQDQATAPAPGPTASKLPNGQIEQLVAP 59 ++R+ L V L LG G A AQT Q+PA P A +IE LVAP Sbjct: 6 LQRVYALCLWLLVALTLGVGSARAQT---QQPA---------APPAEPFKPEEIEALVAP 53 Query: 60 IALYPDALLSQILMASTYPLEVVEAARWSQDNKTVTGKALEDAMQKQSWDPSVKALAAVP 119 IALYPD++LSQ+LMASTYPLE+V AARW + N V G A A++K+ WD SVK++ A P Sbjct: 54 IALYPDSVLSQVLMASTYPLEIVHAARWVKANPNVKGDAAVKAVEKEPWDVSVKSMVAFP 113 Query: 120 QVLQMMNDKLDWTQHLGDAFLAQEQDVMSAVQTLRQRAEAAGNLKSTPQQKVIKSAPPAG 179 Q+L+ MNDKLDWTQ LGDAFLAQ++DV +AVQ LR RA+ +GNLKS QQ V+ PPA Sbjct: 114 QILEPMNDKLDWTQKLGDAFLAQQKDVFAAVQRLRARAKDSGNLKSNEQQNVVVEQPPA- 172 Query: 180 VTAPSGMQQAISIEPVDPDQYYVPVYDPGVVYGAWDYPDYQPFYWSPPGYVAAG---VIG 236 G + I +EP +P YVP Y+P VVYGAW YP Y P YW P G G Sbjct: 173 -----GGETIIKVEPANPQVIYVPSYNPTVVYGAWSYPTYPPTYWPPYPAYYPGAALATG 227 Query: 237 FTASVAVGA--AIWGGCNWWGRNVYVNVNRY----NQFNRTNIRNTNWAHNPAHRGGVAY 290 F + + A AI+ CNW G +V +NVN+ F+RT ++ W H+ +HR GVAY Sbjct: 228 FAWGIGLAAAGAIFSNCNWGGGDVNINVNKAANIDRNFDRTKVQGGRWQHDGSHRQGVAY 287 Query: 291 RDAGVARRFGSGNTPAA--REALRNRTGGPGGRVSNAGAGRARTAVSQ------RAGNRG 342 RD ++ S N P A R R R G G R + A A AGNR Sbjct: 288 RDNATREKY-SRNVPGAEGRSDFRGRDTGAGARANTADRAGAGAGNRAGAADRANAGNRA 346 Query: 343 ASVSR-RASSRNVTRAHTRAGNRAAISHRS 371 A+ R A +R T AGNRA + RS Sbjct: 347 ATADRGSAGNRASTADRASAGNRAGTADRS 376