BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0038.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_488010.1| (2Fe-2S)-binding protein [Rhodopseudomonas palu... 201 2e-50 ref|YP_003590145.1| (2Fe-2S)-binding domain-containing protein [... 171 3e-41 ref|ZP_05739801.1| 2Fe-2S binding domain protein [Silicibacter s... 168 3e-40 ref|YP_613761.1| (2Fe-2S)-binding [Ruegeria sp. TM1040] >gi|9903... 167 4e-40 ref|YP_001043406.1| 2Fe-2S iron-sulfur cluster binding domain-co... 167 5e-40 >ref|YP_488010.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD09099.1| (2Fe-2S)-binding protein [Rhodopseudomonas palustris HaA2] Length = 155 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/148 (64%), Positives = 114/148 (77%) Query: 1 LAISFSLNGKTIAVDIPAYVLLIDLIRDRLGLKGTKRSCDMEVCGACTVLLDGEPVSSCT 60 L ISF+LNG + + LLID +RD LGLKGTKRSCD++VCGACTVL+DG PVSSCT Sbjct: 7 LDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGLPVSSCT 66 Query: 61 TLAVDVDRREVTTIEGVTPPDGLSRIQEAFVLHGGLQCGFCTPGFIMAVTALLKTTPHPT 120 +LA D+D R V TIEG+ LS +Q+AFV H +QCGFCTPG ++A TALL+ PHPT Sbjct: 67 SLAADIDGRSVVTIEGLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLEHHPHPT 126 Query: 121 DAEIRHYLHGNLCRCTGYTKIFEAVKSL 148 + EIRHYL GN+CRCTGY KI EAVKSL Sbjct: 127 EQEIRHYLRGNICRCTGYIKILEAVKSL 154 >ref|YP_003590145.1| (2Fe-2S)-binding domain-containing protein [Bacillus tusciae DSM 2912] gb|ADG07001.1| (2Fe-2S)-binding domain protein [Bacillus tusciae DSM 2912] Length = 162 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 82/149 (55%), Positives = 103/149 (69%) Query: 1 LAISFSLNGKTIAVDIPAYVLLIDLIRDRLGLKGTKRSCDMEVCGACTVLLDGEPVSSCT 60 +AI+ +NG+T VD+ LL D++R RLGL GT C+ VCGACTVL+DG P SC Sbjct: 9 VAITLRVNGQTYDVDVEPRWLLSDVLRHRLGLTGTHVGCEQGVCGACTVLVDGRPERSCL 68 Query: 61 TLAVDVDRREVTTIEGVTPPDGLSRIQEAFVLHGGLQCGFCTPGFIMAVTALLKTTPHPT 120 AV RE+TT+EG+TP +GLS +Q A H GLQCGFCTPG I+AV ALL+ PHPT Sbjct: 69 MFAVQAAGREITTVEGLTPAEGLSPVQAALQAHHGLQCGFCTPGMIVAVEALLRENPHPT 128 Query: 121 DAEIRHYLHGNLCRCTGYTKIFEAVKSLA 149 + ++R L GNLCRCTGY I +AV +A Sbjct: 129 EEQVREALSGNLCRCTGYQFIVDAVLDVA 157 >ref|ZP_05739801.1| 2Fe-2S binding domain protein [Silicibacter sp. TrichCH4B] gb|EEW59097.1| 2Fe-2S binding domain protein [Silicibacter sp. TrichCH4B] Length = 161 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 79/153 (51%), Positives = 102/153 (66%), Gaps = 1/153 (0%) Query: 3 ISFSLNGKTIAVDIPAYVLLIDLIRDRLGLKGTKRSCDMEVCGACTVLLDGEPVSSCTTL 62 +S ++NG ++ D+ LL+ +RD+ GL GT CD CGAC V +DG+ V SCT L Sbjct: 4 VSMTVNGTPMSGDVEGRTLLVSFLRDKQGLTGTHVGCDTSQCGACVVHVDGKAVKSCTML 63 Query: 63 AVDVDRREVTTIEGVTPPDG-LSRIQEAFVLHGGLQCGFCTPGFIMAVTALLKTTPHPTD 121 A++ + EV TIEG PDG L+ IQ AF H GLQCGFCTPG +M+ ALLK P P++ Sbjct: 64 ALEAEGAEVATIEGQAAPDGTLNAIQAAFQEHHGLQCGFCTPGMVMSAAALLKENPKPSE 123 Query: 122 AEIRHYLHGNLCRCTGYTKIFEAVKSLAIQQAS 154 AEIRHYL GNLCRCTGY I +A+ + + Q S Sbjct: 124 AEIRHYLEGNLCRCTGYHNIVKAIMAASGQDVS 156 >ref|YP_613761.1| (2Fe-2S)-binding [Ruegeria sp. TM1040] gb|ABF64499.1| carbon-monoxide dehydrogenase small subunit [Ruegeria sp. TM1040] Length = 161 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 78/153 (50%), Positives = 102/153 (66%), Gaps = 1/153 (0%) Query: 3 ISFSLNGKTIAVDIPAYVLLIDLIRDRLGLKGTKRSCDMEVCGACTVLLDGEPVSSCTTL 62 +S ++NG ++ ++ LL+ +RD+ GL GT CD CGAC V +DG+ V SCT L Sbjct: 4 VSMTVNGNPVSGNVEGRTLLVSFLRDQQGLTGTHVGCDTSQCGACVVHVDGKAVKSCTML 63 Query: 63 AVDVDRREVTTIEGVTPPDG-LSRIQEAFVLHGGLQCGFCTPGFIMAVTALLKTTPHPTD 121 A++ + EV TIEG PDG L+ IQ AF H GLQCGFCTPG +M+ ALLK P P++ Sbjct: 64 ALEAEGAEVATIEGQAAPDGTLNAIQAAFQEHHGLQCGFCTPGMVMSAAALLKENPKPSE 123 Query: 122 AEIRHYLHGNLCRCTGYTKIFEAVKSLAIQQAS 154 AEIRHYL GNLCRCTGY I +A+ + + Q S Sbjct: 124 AEIRHYLEGNLCRCTGYHNIVKAIMAASGQDVS 156 >ref|YP_001043406.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gb|ABN76634.1| (2Fe-2S)-binding domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 160 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 81/150 (54%), Positives = 101/150 (67%), Gaps = 1/150 (0%) Query: 1 LAISFSLNGKTIAVDIPAYVLLIDLIRDRLGLKGTKRSCDMEVCGACTVLLDGEPVSSCT 60 + ++ ++NG+ ++ + LL +RD LGL GT CD CGACTV +DGEPV SCT Sbjct: 1 MKVTMTVNGRPMSAETEGRTLLSSFLRDGLGLTGTHVGCDTTQCGACTVHVDGEPVKSCT 60 Query: 61 TLAVDVDRREVTTIEGVTPPDG-LSRIQEAFVLHGGLQCGFCTPGFIMAVTALLKTTPHP 119 LA DV R VTTIEG+ DG LS IQ+AF H GLQCGFCTPG +M ALL P+P Sbjct: 61 VLAQDVAGRSVTTIEGMANKDGSLSVIQQAFQDHHGLQCGFCTPGMVMISAALLNEKPNP 120 Query: 120 TDAEIRHYLHGNLCRCTGYTKIFEAVKSLA 149 T+ E+RHYL GN+CRCTGY I +AV + A Sbjct: 121 TEEEVRHYLKGNICRCTGYHNIVKAVMAAA 150