BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0246.0036.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_488012.1| carbon monoxide dehydrogenase subunit G [Rhodop...   140   8e-32
ref|ZP_01547341.1| hypothetical protein SIAM614_14770 [Stappia a...    76   2e-12
ref|ZP_05087203.1| carbon monoxide dehydrogenase subunit G [Pseu...    76   2e-12
ref|ZP_05067537.1| carbon monoxide dehydrogenase subunit G [Octa...    72   4e-11
ref|YP_297799.1| carbon monoxide dehydrogenase subunit G [Ralsto...    72   4e-11

>ref|YP_488012.1| carbon monoxide dehydrogenase subunit G [Rhodopseudomonas palustris
           HaA2]
 gb|ABD09101.1| Carbon monoxide dehydrogenase subunit G [Rhodopseudomonas palustris
           HaA2]
          Length = 150

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 99/150 (66%), Gaps = 5/150 (3%)

Query: 1   MEFNMSMAVPATPAQLWSTLLDVPRISSCIPGCESVEEIQRLATYKATVKQKIGPFKLEV 60
           MEF M   +P TP +LW  +LD+  ++ CIPG E++EE +RL  Y A +KQKIGPFKLEV
Sbjct: 1   MEFRMEADLPCTPDRLWPIMLDIREMAGCIPGIETIEEKERLKAYSALMKQKIGPFKLEV 60

Query: 61  PADIIVESITEPSHVRTRATGRDKITGTRLAVVLDVTVTQEGSGST-FAVDAKVDVQGRL 119
           PA+I+VE+  E   V  +ATG+DK TGT L V  D+ +    +  T  AV A + + GRL
Sbjct: 61  PAEIVVEAFGELEFVIAQATGKDKFTGTTLRVNFDLRLEVIAAELTRLAVQADLQIAGRL 120

Query: 120 ATMGFGIIKRRVDQNFEEFE----KRLKEM 145
           A++G  +IK++  +NF EFE    KRL+E+
Sbjct: 121 ASLGHSMIKKKAQENFAEFEANFRKRLEEI 150


>ref|ZP_01547341.1| hypothetical protein SIAM614_14770 [Stappia aggregata IAM 12614]
 gb|EAV44071.1| hypothetical protein SIAM614_14770 [Stappia aggregata IAM 12614]
          Length = 234

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)

Query: 1   MEFNMSMAVPATPAQLWSTLLDVPRISSCIPGCESVEEIQRLATYKATVKQKIGPFKLEV 60
           M+ + S  +PA    +W  L D   + +CIPGCES+E+        A V  KIGP K + 
Sbjct: 1   MDMSGSRRIPAKRETVWQALNDPDVLRACIPGCESLEKTSD-TEMTAAVTSKIGPVKAKF 59

Query: 61  PADIIVESITEPSHVRTRATGRDKITGTRLAVVLDVTVTQEGSGSTFAVDAKVDVQGRLA 120
             ++ +E++  P        G+  + G       DV +T+EG  +    +AK  V G+LA
Sbjct: 60  KGEVTLENMNPPESYTITGEGKGGVAGFAKGSA-DVKLTEEGDETILTYEAKAQVGGKLA 118

Query: 121 TMGFGIIKRRVDQNFEEFEKRLKEMLGA 148
            +G  +I     +  EEF  +  EM+G+
Sbjct: 119 QLGSRLIDSTAKKMAEEFFTKFSEMVGS 146


>ref|ZP_05087203.1| carbon monoxide dehydrogenase subunit G [Pseudovibrio sp. JE062]
 gb|EEA92399.1| carbon monoxide dehydrogenase subunit G [Pseudovibrio sp. JE062]
          Length = 235

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 2/148 (1%)

Query: 1   MEFNMSMAVPATPAQLWSTLLDVPRISSCIPGCESVEEIQRLATYKATVKQKIGPFKLEV 60
           ME +    +PA+  ++W  L D   +  CIPGC+S+E+        ATV  K+GP K + 
Sbjct: 1   MEMSGEQQIPASQEKVWEALNDPELLKKCIPGCDSLEKTSD-TEMTATVTAKVGPVKAKF 59

Query: 61  PADIIVESITEPSHVRTRATGRDKITGTRLAVVLDVTVTQEGSGSTFAVDAKVDVQGRLA 120
             ++ +  +  P+  +    G+  + G       DVT+++ G G+  + +    V G+LA
Sbjct: 60  KGEVTLSDLNPPNSYKISGEGKGGVAGFAKGSA-DVTLSESGDGTLLSYEVNAKVGGKLA 118

Query: 121 TMGFGIIKRRVDQNFEEFEKRLKEMLGA 148
            +G  +I     +  EEF   L   LG 
Sbjct: 119 QLGNRLIDSTAKKMAEEFFSNLNRELGG 146


>ref|ZP_05067537.1| carbon monoxide dehydrogenase subunit G [Octadecabacter antarcticus
           238]
 gb|EDY92776.1| carbon monoxide dehydrogenase subunit G [Octadecabacter antarcticus
           238]
          Length = 152

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 1   MEFNMSMAVPATPAQLWSTLLDVPRISSCIPGCESVEEIQRLATYKATVKQKIGPFKLEV 60
           ME   +  + A  A +W+ L +V  + +CIPGCE +        ++A VKQK+GP K   
Sbjct: 1   MELIGTRIIAADRATVWTHLNNVETLRACIPGCEELTGTPETG-FEAVVKQKVGPVKATF 59

Query: 61  PADIIVESITEPSHVRTRATGRDKITG-TRLAVVLDVTVTQEGSGSTFAVDAKVDVQGRL 119
              + +E +  P+  R    G+  + G  + A  + +   + G+  ++ VDAKV   G+L
Sbjct: 60  KGAVTLEDVNAPNSYRIVGEGKGGVAGFAKGAAEVTLADVEGGTELSYNVDAKVG--GKL 117

Query: 120 ATMGF----GIIKRRVDQNFEEFEKRLKE 144
           A +G     G  K+  DQ FE+F+  ++E
Sbjct: 118 AQLGSRIVGGFAKKMADQFFEDFQAIVEE 146


>ref|YP_297799.1| carbon monoxide dehydrogenase subunit G [Ralstonia eutropha JMP134]
 gb|AAZ62955.1| Carbon monoxide dehydrogenase subunit G [Ralstonia eutropha JMP134]
          Length = 254

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 1   MEFNMSMAVPATPAQLWSTLLDVPRISSCIPGCESVEEIQRLATYKATVKQKIGPFKLEV 60
           ME   ++     PA++W  +LD   + +C+PG ES+E I  +  Y A +  KI       
Sbjct: 1   MEIEKTLVTAVPPARVWELMLDPNVMGACVPGMESIEVISDV-EYIAHMAVKIAFINARF 59

Query: 61  PADIIVESITEPSHVRTRATGRDKITGTRLAVVLDVTVTQEGSGST-FAVDAKVDVQGRL 119
                +     P ++RT  TG D    + L    ++ +T++  GST   +  +VDV GRL
Sbjct: 60  RLHTKIVETRAPHYLRTEGTGEDASVASSLRQTSEMFLTEQEDGSTQLRIKVQVDVLGRL 119

Query: 120 ATMGFGIIKRRVDQNFEEFEKRL 142
            T G  ++K + D+ ++EF   L
Sbjct: 120 GTFGLSVMKTKADRMWDEFGANL 142