BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0019.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003450606.1| branched-chain amino acid transport system p... 236 3e-60 ref|ZP_00053653.2| COG0559: Branched-chain amino acid ABC-type t... 228 9e-58 ref|YP_421823.1| branched chain amino acid ABC transporter perme... 220 2e-55 ref|ZP_00053198.2| COG0559: Branched-chain amino acid ABC-type t... 207 2e-51 ref|YP_421392.1| branched chain amino acid ABC transporter [Magn... 200 3e-49 >ref|YP_003450606.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] dbj|BAI74062.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 289 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 145/288 (50%), Positives = 205/288 (71%), Gaps = 8/288 (2%) Query: 7 WLNVLASGILLGLVYGLVALGLTIIFGVMRVVNFAHGEMVVFGVY----IGYWTVRLWNV 62 +LN+ ASG+L GLVYGL ALGL++IFGV+RVVNFAHGEM+V G+Y +G W + Sbjct: 6 YLNIAASGLLTGLVYGLAALGLSVIFGVVRVVNFAHGEMMVAGMYGAVLLGGWI----GL 61 Query: 63 PIIVAAAIAAVVMFVFGYLLEALIVKRFVNRPHHYQFIVFIGLSLLFSGALLVAFGPDPR 122 +++A I A ++F G+LL+ +V +FV RP H QFI+ +G++ + A+L+ FGPD R Sbjct: 62 DPLLSAPIMAALLFACGWLLQRGLVNKFVERPEHMQFILLLGVATVLVNAMLMLFGPDAR 121 Query: 123 PTASQLSFQTVSLGLVTLDLARLQAAATAGLLIALLGAYLKFSSFGRSLRAAADNRLGGL 182 SF TV +G + LD RL+A A A ++ A L A+ +FS G+++RA ADN LG Sbjct: 122 NVQVPYSFDTVEIGPMLLDAVRLRAGAAAIVVAAALFAFFRFSRTGKAIRACADNPLGAR 181 Query: 183 IVGLNIPRVYAVTFGIGAACAGVAGALISPLFDAQPYLAVDFTLLAFVTVIVGGLGSFGG 242 +VGLNI +YA+TFGIGAA GVAGAL++ L DA+P LA ++TLL+F+ VIVGGLGS G Sbjct: 182 VVGLNIDGLYALTFGIGAAVVGVAGALMTLLVDARPQLAPEYTLLSFIIVIVGGLGSLPG 241 Query: 243 ALLGGLVIGVAEAIAALMFTPSMKTALPYALLIIILVFRPRGFFGAKE 290 ALLGG++IG++EA+A + TPS+K+ Y +LI++L+ RP+G G + Sbjct: 242 ALLGGVLIGMSEALAGFLLTPSLKSLFSYGVLIVVLLLRPQGLLGKRS 289 >ref|ZP_00053653.2| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magnetotacticum MS-1] Length = 288 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 186/283 (65%), Gaps = 2/283 (0%) Query: 9 NVLASGILLGLVYGLVALGLTIIFGVMRVVNFAHGEMVVFGVYIGYWTVRLW-NVPIIVA 67 N + +G+L GLVY L+ALGL++IFGV+RVVNFAHGEM +Y W + W + ++ Sbjct: 7 NQIVTGLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTALAMY-AAWALFSWLELDPLIG 65 Query: 68 AAIAAVVMFVFGYLLEALIVKRFVNRPHHYQFIVFIGLSLLFSGALLVAFGPDPRPTASQ 127 + A+++F GY+++ ++ FV++P H QFI+ + ++++ L+ FGPD Sbjct: 66 LPLIALLLFALGYVMQRGLIDAFVSKPEHMQFILLVAVAIVMVNGSLLVFGPDAHGIQVP 125 Query: 128 LSFQTVSLGLVTLDLARLQAAATAGLLIALLGAYLKFSSFGRSLRAAADNRLGGLIVGLN 187 F T +G + +D RL AA A + LL + + + G+++RA ADN +G ++GLN Sbjct: 126 YGFDTYEVGPLLVDKVRLLAAVAALAISGLLMLFFRHTMTGKAIRACADNLVGAKVIGLN 185 Query: 188 IPRVYAVTFGIGAACAGVAGALISPLFDAQPYLAVDFTLLAFVTVIVGGLGSFGGALLGG 247 + ++YAVTFGIG+AC G AGAL++ L D P + T+LAF+ VIVGGLGS GGALLGG Sbjct: 186 VKQLYAVTFGIGSACVGAAGALLAMLIDVMPSSGPELTMLAFIIVIVGGLGSMGGALLGG 245 Query: 248 LVIGVAEAIAALMFTPSMKTALPYALLIIILVFRPRGFFGAKE 290 ++IG++E +A PSMK+ +A+LI++L+ RP+G GA++ Sbjct: 246 ILIGISEVLAGYFLMPSMKSMFSFAILILVLILRPQGLMGARK 288 >ref|YP_421823.1| branched chain amino acid ABC transporter permease [Magnetospirillum magneticum AMB-1] dbj|BAE51264.1| Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magneticum AMB-1] Length = 290 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/283 (44%), Positives = 185/283 (65%), Gaps = 2/283 (0%) Query: 9 NVLASGILLGLVYGLVALGLTIIFGVMRVVNFAHGEMVVFGVYIGYWTVRLW-NVPIIVA 67 N + +G+L GLVY L+ALGL++IFGV+RVVNFAHGEM +Y W + W + +V Sbjct: 9 NQILTGLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTALAMY-AAWALFNWLELDPLVG 67 Query: 68 AAIAAVVMFVFGYLLEALIVKRFVNRPHHYQFIVFIGLSLLFSGALLVAFGPDPRPTASQ 127 + A+++F GYL++ ++ FV++P H QFI+ + ++++ L+ FGPD Sbjct: 68 LPLIALLLFALGYLMQRGLIDAFVSKPEHMQFILLVAVAIIMVNGSLLVFGPDAHGIQVP 127 Query: 128 LSFQTVSLGLVTLDLARLQAAATAGLLIALLGAYLKFSSFGRSLRAAADNRLGGLIVGLN 187 F T +G + +D RL AA A + LL + + + G+++RA ADN +G ++GLN Sbjct: 128 YGFDTYEVGPLLIDKVRLLAAVAALGISGLLMLFFRHTMTGKAIRACADNLVGARVIGLN 187 Query: 188 IPRVYAVTFGIGAACAGVAGALISPLFDAQPYLAVDFTLLAFVTVIVGGLGSFGGALLGG 247 + ++YAVTFGIG+AC G AGAL++ L D P + T+LAF+ VIVGGLGS GGALLGG Sbjct: 188 VKQLYAVTFGIGSACVGAAGALLALLIDVMPSSGPELTMLAFIIVIVGGLGSMGGALLGG 247 Query: 248 LVIGVAEAIAALMFTPSMKTALPYALLIIILVFRPRGFFGAKE 290 ++IGV+E +A PSMK +A+LI+ILV RP+G GA++ Sbjct: 248 ILIGVSEVLAGYFLMPSMKAMFSFAILILILVLRPQGLMGARK 290 >ref|ZP_00053198.2| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magnetotacticum MS-1] Length = 289 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/285 (44%), Positives = 200/285 (70%) Query: 5 SLWLNVLASGILLGLVYGLVALGLTIIFGVMRVVNFAHGEMVVFGVYIGYWTVRLWNVPI 64 + ++NV+++G+L GLVYGL+ALGL++IFGVMRVVNFAHG+M+V +Y + + Sbjct: 4 TFFMNVISAGLLTGLVYGLMALGLSVIFGVMRVVNFAHGDMMVVAMYAAFLLYTKMGIEP 63 Query: 65 IVAAAIAAVVMFVFGYLLEALIVKRFVNRPHHYQFIVFIGLSLLFSGALLVAFGPDPRPT 124 + A + A ++FV GYLL+ ++ F+ H QF++ + ++++ + +L+ FGPD R Sbjct: 64 VPALPLVAGLLFVVGYLLQRFLINHFLGVTEHIQFLLLLSVAMIITNIVLMVFGPDARNI 123 Query: 125 ASQLSFQTVSLGLVTLDLARLQAAATAGLLIALLGAYLKFSSFGRSLRAAADNRLGGLIV 184 SF++ SLG + LD R+ AA TAG + ALL A+ K+++ G ++RA ADN +G +V Sbjct: 124 QLDASFESYSLGPLVLDKVRVTAAFTAGGVAALLWAFFKYTTTGTAIRACADNPVGARVV 183 Query: 185 GLNIPRVYAVTFGIGAACAGVAGALISPLFDAQPYLAVDFTLLAFVTVIVGGLGSFGGAL 244 GLN+ ++YA+TFGIG AC G AG L+ L D P+L+ D+TLL F+ VI+GGLGS GGAL Sbjct: 184 GLNVEKLYAITFGIGTACVGAAGCLLLLLVDVHPHLSSDYTLLGFIIVILGGLGSLGGAL 243 Query: 245 LGGLVIGVAEAIAALMFTPSMKTALPYALLIIILVFRPRGFFGAK 289 LGG+++G++EA++ ++ PS+K+ + LLI++L+ RP+G G K Sbjct: 244 LGGILVGLSEALSGVLIAPSLKSMFSFGLLILVLLLRPQGILGKK 288 >ref|YP_421392.1| branched chain amino acid ABC transporter [Magnetospirillum magneticum AMB-1] dbj|BAE50833.1| Branched-chain amino acid ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 289 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 125/285 (43%), Positives = 199/285 (69%) Query: 5 SLWLNVLASGILLGLVYGLVALGLTIIFGVMRVVNFAHGEMVVFGVYIGYWTVRLWNVPI 64 + ++NV+++G+L GLVYGL+ALGL++IFGVMRVVNFAHG+M+V +Y + + Sbjct: 4 TFFVNVISAGLLTGLVYGLMALGLSVIFGVMRVVNFAHGDMMVVAMYAAFLLFTKLGIEP 63 Query: 65 IVAAAIAAVVMFVFGYLLEALIVKRFVNRPHHYQFIVFIGLSLLFSGALLVAFGPDPRPT 124 + A + A +FV GYLL+ ++ F+ H QF++ + ++++ + +L+ FGPD R Sbjct: 64 VPALPLVAGGLFVVGYLLQRFLINHFLGVTEHIQFLLLLSVAMIITNVVLMVFGPDARNI 123 Query: 125 ASQLSFQTVSLGLVTLDLARLQAAATAGLLIALLGAYLKFSSFGRSLRAAADNRLGGLIV 184 SF++ +LG + LD R+ AA TAG + ALL A+ ++++ G ++RA ADN +G +V Sbjct: 124 QLDASFESYNLGWLVLDKVRVIAAFTAGGVAALLWAFFRYTTTGTAIRACADNPVGARVV 183 Query: 185 GLNIPRVYAVTFGIGAACAGVAGALISPLFDAQPYLAVDFTLLAFVTVIVGGLGSFGGAL 244 GL++ ++YA+TFGIG AC G AG L+ L D P+L+ D+TLL F+ VI+GGLGS GGAL Sbjct: 184 GLDVEKLYAITFGIGTACVGAAGCLLLLLVDVHPHLSSDYTLLGFIIVILGGLGSLGGAL 243 Query: 245 LGGLVIGVAEAIAALMFTPSMKTALPYALLIIILVFRPRGFFGAK 289 LGG+++G++EA++ ++ PS+K+ + LLI++L+ RP+G G K Sbjct: 244 LGGILVGLSEALSGVLIAPSLKSMFSFGLLILVLLLRPQGILGKK 288