BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0009.p (817 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771909.1| two-component hybrid sensor and regulator [Brad... 1275 0.0 ref|YP_001205275.1| sensor histidine kinase [Bradyrhizobium sp. ... 1196 0.0 ref|YP_001240833.1| PAS/PAC sensor hybrid histidine kinase [Brad... 1166 0.0 ref|YP_530454.1| PAS/PAC sensor hybrid histidine kinase [Rhodops... 1102 0.0 ref|YP_001990188.1| PAS/PAC sensor hybrid histidine kinase [Rhod... 1045 0.0 >ref|NP_771909.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC50534.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] Length = 825 Score = 1275 bits (3299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 622/813 (76%), Positives = 717/813 (88%), Gaps = 3/813 (0%) Query: 2 LPEAAAAERLRQHLEEIARERDRAHRELQEREAELARIQRIARVGGLEIDFRDGVRNRRS 61 LPE AAERLRQHLE++ARERD A+R LQEREAELARIQRI +VGGLE+DFR+G +NRRS Sbjct: 15 LPETIAAERLRQHLEDVARERDNAYRALQEREAELARIQRIGKVGGLEVDFREGFKNRRS 74 Query: 62 PEYLLVHGLPPEEINETYENWVARIHPEDRERTIRHLFGVLKAGGEDYTAEYRIIRPNDG 121 PEYL++HGLPPE +E++E+WV RIHP+DR+ ++H F VL EDYTAEYRIIRP+DG Sbjct: 75 PEYLMIHGLPPEAADESHEDWVNRIHPDDRDAAVKHFFDVLAETSEDYTAEYRIIRPSDG 134 Query: 122 ESRWIRVVAKIERDRSEKKKNALRLVGADLDVTDQMLAQETLRESEERFRLIADSAPVPI 181 E+RWIRVVAKIERD + + A+RLVGA +D+TDQMLA+ETLRESE+RFRLIADSAPVPI Sbjct: 135 ETRWIRVVAKIERDSNGR---AIRLVGAHIDITDQMLARETLRESEDRFRLIADSAPVPI 191 Query: 182 WVTKLDRTRSFANRAYLDFLGLPFEEAIVFDWRKALHPDDLPQILQEQITGELSLKPFVL 241 WVTKLDR RSFAN+AY+DF+GLP+EEAI FDWRK LHPDDLP +LQ+ + GE SLKPFVL Sbjct: 192 WVTKLDRKRSFANQAYVDFVGLPYEEAIDFDWRKVLHPDDLPHVLQQSVQGEASLKPFVL 251 Query: 242 EARYRNAEGDWRWLRSESQPRWDPNGKHIGFIGVAHDITAAKEAEIELRKLNESLERRIL 301 EARY+NA G+WRWLRSESQPRWDP GKHIGFIGVAHDITAAK+AEIELR+LNE+LE RI+ Sbjct: 252 EARYKNASGEWRWLRSESQPRWDPTGKHIGFIGVAHDITAAKQAEIELRRLNETLEERIV 311 Query: 302 ERTAQLESREAQTRAILETSHQYQMLLNRDGDLLYSNQTALAGICTDAADVVGKPFWDTP 361 ERTA+LES EA+ RAILETS+QYQ L+N +G+LLY+N+TALAGI T+A DV+G+PFWDTP Sbjct: 312 ERTAELESNEARLRAILETSNQYQGLVNLEGELLYANKTALAGIRTEARDVIGQPFWDTP 371 Query: 362 WFAATEGMPRVIRNAFATVMRGEEVKIEMQLRLPIGERYFDFAMRPLQDQHGTIVGAVPE 421 WF T GM V R AF TV+RGE V++EM+LRLPIGER F+F MRP+ D+HG I GAVPE Sbjct: 372 WFTETPGMSDVAREAFETVLRGEAVRMEMRLRLPIGERDFEFGMRPVLDRHGNITGAVPE 431 Query: 422 AVDITERRRGEEALRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRELPDDRRRR 481 VDITERRRGEEALRQSQKMEA+GQLTGGVAHDFNNLLTIIRSATDFLRRRELP++RRRR Sbjct: 432 LVDITERRRGEEALRQSQKMEAIGQLTGGVAHDFNNLLTIIRSATDFLRRRELPEERRRR 491 Query: 482 YIDAISETVERASKLTAQLLAFARRQPLNPEVFNVGTQVDSVTQLIRPLVGARIHIEVRI 541 Y+DAIS+TVERASKLTAQLLAFARRQPL P++FNVG+QV+ V QL+RPLVG RI I V + Sbjct: 492 YVDAISDTVERASKLTAQLLAFARRQPLKPQIFNVGSQVEGVAQLVRPLVGGRIEISVEV 551 Query: 542 EDPDCFAIADIGQFETALLNLAVNARDAMSGEGQLTIGVRKVKNIPALRAQASRSGDFVT 601 D DCF +AD+ QFE AL+NLA+NARDAM EG+LTI VRKV+ IP+LRAQ++R GD+V Sbjct: 552 HDTDCFTVADVAQFEAALINLAINARDAMDDEGRLTIAVRKVQGIPSLRAQSARGGDYVA 611 Query: 602 VSIQDTGTGISPENLDAIFEPFFTTKEVGKGTGLGLSQAFGFVKQSDGDIEVTSTPGHGA 661 +S+ DTG+GI+PEN+DAIFEPFFTTKEVGKGTGLGLSQAFGF KQS+GDI V STPG GA Sbjct: 612 ISVADTGSGIAPENIDAIFEPFFTTKEVGKGTGLGLSQAFGFAKQSEGDIAVMSTPGKGA 671 Query: 662 TFTIYLPQAMRPADAKVAASAGTEQASIGRGYRVLVVEDNDDVGQFSTELLEDLGYSVKR 721 TFTIYLPQA PA AA+ +E A+ GRGYRVLVVEDNDDVGQFSTELLEDLGY V+R Sbjct: 672 TFTIYLPQAQSPAADDEAAARTSEAATTGRGYRVLVVEDNDDVGQFSTELLEDLGYVVRR 731 Query: 722 AANANAALSILSENEFAADLVFSDVIMPGMNGVELAGIIRDRFPGLPVVLTSGYSNVLAE 781 ANA+AAL+IL ENEFA DLVFSDVIMPGMNGVELAGIIR+R+PGLPVVLTSGYSNVLAE Sbjct: 732 VANASAALAILGENEFAVDLVFSDVIMPGMNGVELAGIIRERYPGLPVVLTSGYSNVLAE 791 Query: 782 NAHSGFELIQKPYSVEALSRTLRKAIAEQRATA 814 NAH GFELIQKPYSVE+LSR LRKAI E+ + A Sbjct: 792 NAHRGFELIQKPYSVESLSRILRKAITEKLSVA 824 >ref|YP_001205275.1| sensor histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL77043.1| sensor histidine kinase with multiple PAS and a response regulator receiver domain [Bradyrhizobium sp. ORS 278] Length = 860 Score = 1196 bits (3094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/810 (70%), Positives = 686/810 (84%), Gaps = 3/810 (0%) Query: 1 VLPEAAAAERLRQHLEEIARERDRAHRELQEREAELARIQRIARVGGLEIDFRDGVRNRR 60 VLPEAA A LRQH+EEIAR+RD+A+R LQEREAELARIQRI RVGG+E+D R+G RNRR Sbjct: 49 VLPEAAGAAELRQHIEEIARDRDQAYRALQEREAELARIQRIGRVGGVEVDLREGFRNRR 108 Query: 61 SPEYLLVHGLPPEEINETYENWVARIHPEDRERTIRHLFGVLKAGGEDYTAEYRIIRPND 120 SPEYL++HGLPPE NET+E+WV RIHP+DR + + +K+ EDYT EYRIIRPND Sbjct: 109 SPEYLIIHGLPPEAANETHEDWVRRIHPDDRAKAEQDFIAAVKSKQEDYTTEYRIIRPND 168 Query: 121 GESRWIRVVAKIERDRSEKKKNALRLVGADLDVTDQMLAQETLRESEERFRLIADSAPVP 180 GE RWIRV+A+IERDR+ + A+RLVGA +DVTDQMLAQ LRESEERFRLIADSAPVP Sbjct: 169 GEIRWIRVIARIERDRNGR---AIRLVGAHIDVTDQMLAQAKLRESEERFRLIADSAPVP 225 Query: 181 IWVTKLDRTRSFANRAYLDFLGLPFEEAIVFDWRKALHPDDLPQILQEQITGELSLKPFV 240 IWVTKLDRTRSF N+AY+DFLGLP +EA+ FDWRK LHP+DLP+IL +Q +GE SLKPF Sbjct: 226 IWVTKLDRTRSFVNQAYVDFLGLPHDEAMAFDWRKVLHPEDLPRILAQQQSGECSLKPFF 285 Query: 241 LEARYRNAEGDWRWLRSESQPRWDPNGKHIGFIGVAHDITAAKEAEIELRKLNESLERRI 300 LEARYR +G+WRWLRSESQPRWD NG+HIGFIGVAHD+TAAK+ EIELR++NE+LE RI Sbjct: 286 LEARYRRVDGEWRWLRSESQPRWDANGRHIGFIGVAHDVTAAKQGEIELRRINETLEERI 345 Query: 301 LERTAQLESREAQTRAILETSHQYQMLLNRDGDLLYSNQTALAGICTDAADVVGKPFWDT 360 ERT+QLE+ EA+ RAI +TS+QYQ +L+ +G + ++N+ A+ G+ DV+G+P W+ Sbjct: 346 RERTSQLEANEARMRAIFDTSNQYQAILDTEGRITHANRIAVMGMRAGGVDVIGQPLWNA 405 Query: 361 PWFAATEGMPRVIRNAFATVMRGEEVKIEMQLRLPIGERYFDFAMRPLQDQHGTIVGAVP 420 PWFA T G+ ++R AFA V+ G+ + E++L G+R+F+ +MRPL DQH I+GAV Sbjct: 406 PWFADTTGVSDMLRKAFARVLSGDSFRTEVRLEFANGDRHFELSMRPLFDQHEAIMGAVA 465 Query: 421 EAVDITERRRGEEALRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRELPDDRRR 480 EAVD+TER +GEE LRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRR+LP++RRR Sbjct: 466 EAVDVTERIQGEELLRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRDLPEERRR 525 Query: 481 RYIDAISETVERASKLTAQLLAFARRQPLNPEVFNVGTQVDSVTQLIRPLVGARIHIEVR 540 RY+DAISETVERASKLT QLLAFARRQPL P+VFNVG QV+SV QLIRPLVG+RIHIE+ Sbjct: 526 RYVDAISETVERASKLTGQLLAFARRQPLTPQVFNVGEQVESVVQLIRPLVGSRIHIELA 585 Query: 541 IEDPDCFAIADIGQFETALLNLAVNARDAMSGEGQLTIGVRKVKNIPALRAQASRSGDFV 600 I+D F +ADI QF+TAL+NLAVNARDAM+GEG+LTIGV++ +IP+LR Q +R G F+ Sbjct: 586 IDDARLFTLADIAQFQTALINLAVNARDAMNGEGRLTIGVQRTDHIPSLRGQTARPGAFI 645 Query: 601 TVSIQDTGTGISPENLDAIFEPFFTTKEVGKGTGLGLSQAFGFVKQSDGDIEVTSTPGHG 660 +S+ DTG GI+P+N++AIFEPFFTTKEVGKGTGLGLSQAFGF KQS+GDI V S GHG Sbjct: 646 AISVSDTGAGIAPQNINAIFEPFFTTKEVGKGTGLGLSQAFGFAKQSEGDIAVDSRLGHG 705 Query: 661 ATFTIYLPQAMRPADAKVAASAGTEQASIGRGYRVLVVEDNDDVGQFSTELLEDLGYSVK 720 ATFTIYLPQA P A A E A+IGRGYRVLVVEDND+VGQFSTELLEDLGY + Sbjct: 706 ATFTIYLPQAAAPQSGTDAGVARIEPATIGRGYRVLVVEDNDEVGQFSTELLEDLGYVTR 765 Query: 721 RAANANAALSILSENEFAADLVFSDVIMPGMNGVELAGIIRDRFPGLPVVLTSGYSNVLA 780 R +NA AL+IL++NEFA DLVFSDVIMPG+NG+ELAGIIR+RFPGLPVVLTSGYS+VLA Sbjct: 766 RVSNAQDALAILADNEFAVDLVFSDVIMPGINGLELAGIIRERFPGLPVVLTSGYSHVLA 825 Query: 781 ENAHSGFELIQKPYSVEALSRTLRKAIAEQ 810 ENAH GFELI+KPYSVE+LSR LRKA+AE+ Sbjct: 826 ENAHHGFELIKKPYSVESLSRILRKAMAEK 855 >ref|YP_001240833.1| PAS/PAC sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ36927.1| PAS/PAC sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1] Length = 822 Score = 1166 bits (3016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/810 (69%), Positives = 675/810 (83%), Gaps = 3/810 (0%) Query: 1 VLPEAAAAERLRQHLEEIARERDRAHRELQEREAELARIQRIARVGGLEIDFRDGVRNRR 60 V+P+ A A LRQH+EEIAR+RD+A+R LQEREAELARIQRIARVGG+E+D R+G RNRR Sbjct: 11 VVPDIAGAAALRQHIEEIARDRDQAYRALQEREAELARIQRIARVGGVEVDLREGFRNRR 70 Query: 61 SPEYLLVHGLPPEEINETYENWVARIHPEDRERTIRHLFGVLKAGGEDYTAEYRIIRPND 120 SPEYL++HGLP E NET+E+WV R+HP+DR + + + + EDYT EYRIIRP+D Sbjct: 71 SPEYLIIHGLPEEAANETHEDWVNRVHPDDRIKAEQDFIAAVNSKQEDYTTEYRIIRPSD 130 Query: 121 GESRWIRVVAKIERDRSEKKKNALRLVGADLDVTDQMLAQETLRESEERFRLIADSAPVP 180 GE RWIRV+A+IERD + + A+RLVGA +DVTDQMLAQ LRESEERFRLIADSAPVP Sbjct: 131 GEIRWIRVIARIERDWNGR---AIRLVGAHIDVTDQMLAQAKLRESEERFRLIADSAPVP 187 Query: 181 IWVTKLDRTRSFANRAYLDFLGLPFEEAIVFDWRKALHPDDLPQILQEQITGELSLKPFV 240 IW+T+LDRTRSF NRAY+DFLGL +EA+ FDWRKALHP+DLP+IL +Q TGE SLKPF Sbjct: 188 IWLTRLDRTRSFVNRAYVDFLGLSHDEALAFDWRKALHPEDLPRILAQQQTGECSLKPFF 247 Query: 241 LEARYRNAEGDWRWLRSESQPRWDPNGKHIGFIGVAHDITAAKEAEIELRKLNESLERRI 300 LEARYR A+G WRWLRSESQPRWD NG+HIGFIGVAHD+TAAK+ EIELR++NE+LE RI Sbjct: 248 LEARYRRADGHWRWLRSESQPRWDANGQHIGFIGVAHDVTAAKQGEIELRRINETLEERI 307 Query: 301 LERTAQLESREAQTRAILETSHQYQMLLNRDGDLLYSNQTALAGICTDAADVVGKPFWDT 360 ERTAQLE+ EA+ RAI +TS+QYQ +L+ +G + + N+ A+ G+ DV+G P WD Sbjct: 308 RERTAQLEANEARMRAIFDTSNQYQAILDTEGRITHVNRIAVDGMRAGGVDVIGHPLWDA 367 Query: 361 PWFAATEGMPRVIRNAFATVMRGEEVKIEMQLRLPIGERYFDFAMRPLQDQHGTIVGAVP 420 PWF T G+ ++R AFA V+ G+ + E++L G+R+F+ +MRPL DQH I+GAV Sbjct: 368 PWFVHTPGVSEMLRKAFARVLAGDSFRTEVRLDFANGDRHFELSMRPLFDQHDAIMGAVA 427 Query: 421 EAVDITERRRGEEALRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRELPDDRRR 480 EAVDITER +GEE LRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRR+LP++RRR Sbjct: 428 EAVDITERIQGEELLRQSQKMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRDLPEERRR 487 Query: 481 RYIDAISETVERASKLTAQLLAFARRQPLNPEVFNVGTQVDSVTQLIRPLVGARIHIEVR 540 RY+DAISETVERASKLT QLLAFARRQPL P+VFNVG QV+SV QLIRPLVG+RI IE+ Sbjct: 488 RYVDAISETVERASKLTGQLLAFARRQPLTPQVFNVGEQVESVVQLIRPLVGSRIQIELA 547 Query: 541 IEDPDCFAIADIGQFETALLNLAVNARDAMSGEGQLTIGVRKVKNIPALRAQASRSGDFV 600 + + F +ADI QF+TAL+NLAVNARDAM+GEG+LTI +R +PALR Q++R G F+ Sbjct: 548 VTETSLFTLADIAQFQTALINLAVNARDAMNGEGRLTISMRSTDTLPALRGQSARPGAFI 607 Query: 601 TVSIQDTGTGISPENLDAIFEPFFTTKEVGKGTGLGLSQAFGFVKQSDGDIEVTSTPGHG 660 +S+ DTG GI+P++L+AIFEPFFTTKEVGKGTGLGLSQAFGF KQS+GDI V S G G Sbjct: 608 AISVADTGAGIAPQHLNAIFEPFFTTKEVGKGTGLGLSQAFGFAKQSEGDIAVESRLGQG 667 Query: 661 ATFTIYLPQAMRPADAKVAASAGTEQASIGRGYRVLVVEDNDDVGQFSTELLEDLGYSVK 720 ATFTIYLPQA P A A +E A+IGRGYRVLVVEDND+VGQFSTELLEDLGY + Sbjct: 668 ATFTIYLPQAAAPQSGPEAGHARSEPATIGRGYRVLVVEDNDEVGQFSTELLEDLGYVTR 727 Query: 721 RAANANAALSILSENEFAADLVFSDVIMPGMNGVELAGIIRDRFPGLPVVLTSGYSNVLA 780 R ANA+ AL+IL +EFA DLVFSDVIMPG+NG+ELAGIIRDR+PGLPVVLTSGYS+VLA Sbjct: 728 RVANAHDALAILETDEFAVDLVFSDVIMPGINGLELAGIIRDRYPGLPVVLTSGYSHVLA 787 Query: 781 ENAHSGFELIQKPYSVEALSRTLRKAIAEQ 810 ENAH GFELI+KPYSVE+LSR LRKA+AE+ Sbjct: 788 ENAHHGFELIKKPYSVESLSRILRKAMAEK 817 >ref|YP_530454.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB18] gb|ABD86135.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB18] Length = 821 Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/792 (67%), Positives = 645/792 (81%), Gaps = 5/792 (0%) Query: 21 ERDRAHRELQEREAELARIQRIARVGGLEIDFRDGVRN-RRSPEYLLVHGLPPEEINETY 79 ER A L+ERE EL R+Q IA++GG+ +D R G+ N RRSPEY +HGLPP+ + + Sbjct: 30 ERHHATSALREREHELTRVQAIAKIGGVVVDLRYGLHNERRSPEYSTIHGLPPDA-PDGH 88 Query: 80 ENWVARIHPEDRERTIRHLFGVLKAGGEDYTAEYRIIRPNDGESRWIRVVAKIERDRSEK 139 E+WV R+HP+DR+R +R L + + Y++EYRIIRPNDG+ RWI A+IER Sbjct: 89 EDWVRRLHPDDRDRALRTLLDAIAGTADHYSSEYRIIRPNDGQIRWIAAEAQIER---SP 145 Query: 140 KKNALRLVGADLDVTDQMLAQETLRESEERFRLIADSAPVPIWVTKLDRTRSFANRAYLD 199 A RLVGA +D+TD+ LA+ETLRESE+RFRLIA+SAPVP+WV++LD R+FAN+AYLD Sbjct: 146 DGRAERLVGAHIDITDRTLAKETLRESEQRFRLIANSAPVPMWVSRLDGKRAFANQAYLD 205 Query: 200 FLGLPFEEAIVFDWRKALHPDDLPQILQEQITGELSLKPFVLEARYRNAEGDWRWLRSES 259 FLGL ++ A+ FDWR LHPDDLP+ILQEQI GE SL+PFVLEARYR A+G WRW+RSES Sbjct: 206 FLGLDYDAALAFDWRTVLHPDDLPRILQEQIAGETSLQPFVLEARYRRADGPWRWMRSES 265 Query: 260 QPRWDPNGKHIGFIGVAHDITAAKEAEIELRKLNESLERRILERTAQLESREAQTRAILE 319 QPRWD GKHIGFIGVAHDITA+KEAE ELR+LNE+LE+RI +RTAQL++ EAQ RA+ E Sbjct: 266 QPRWDAAGKHIGFIGVAHDITASKEAETELRRLNETLEQRIKQRTAQLQANEAQMRAMFE 325 Query: 320 TSHQYQMLLNRDGDLLYSNQTALAGICTDAADVVGKPFWDTPWFAATEGMPRVIRNAFAT 379 T++QYQ LL+ G+++Y N TALAGI + V+G FWD+PWF TEGM +R AFA Sbjct: 326 TTNQYQGLLDLKGNIVYINATALAGIRSTVDAVLGIRFWDSPWFTGTEGMRDCVRGAFAA 385 Query: 380 VMRGEEVKIEMQLRLPIGERYFDFAMRPLQDQHGTIVGAVPEAVDITERRRGEEALRQSQ 439 +GE V+ EM L LPIG+R+FDFAMRP+ D+HG + +PEAVDITERR EEALRQSQ Sbjct: 386 AKKGETVRTEMLLHLPIGDRFFDFAMRPIFDEHGRVSAVLPEAVDITERRHSEEALRQSQ 445 Query: 440 KMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRELPDDRRRRYIDAISETVERASKLTAQ 499 KMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRR+LP++RRRRYIDAISETV+RAS LT Q Sbjct: 446 KMEAVGQLTGGVAHDFNNLLTIIRSATDFLRRRDLPEERRRRYIDAISETVDRASTLTGQ 505 Query: 500 LLAFARRQPLNPEVFNVGTQVDSVTQLIRPLVGARIHIEVRIEDPDCFAIADIGQFETAL 559 LLAFARRQPL P+VFN+G+QV+S+ QLIRPLVG+RI I V + PDCFA+AD+ QFETAL Sbjct: 506 LLAFARRQPLTPQVFNIGSQVESIAQLIRPLVGSRIQIAVHLGCPDCFAMADVAQFETAL 565 Query: 560 LNLAVNARDAMSGEGQLTIGVRKVKNIPALRAQASRSGDFVTVSIQDTGTGISPENLDAI 619 +NLAVN RDAM+GEG LT V KV+ +P LR+ R G F+ V++ DTG+GI+PE L+AI Sbjct: 566 VNLAVNGRDAMNGEGCLTFDVVKVEALPPLRSHPGRRGSFIAVAVTDTGSGIAPERLEAI 625 Query: 620 FEPFFTTKEVGKGTGLGLSQAFGFVKQSDGDIEVTSTPGHGATFTIYLPQAMRPADAKVA 679 FEPF+TTKEVGKGTGLGLSQAFGF KQS G+IEVTST GHG+TFTIYLPQA PA+ Sbjct: 626 FEPFYTTKEVGKGTGLGLSQAFGFAKQSGGEIEVTSTLGHGSTFTIYLPQAESPAELADV 685 Query: 680 ASAGTEQASIGRGYRVLVVEDNDDVGQFSTELLEDLGYSVKRAANANAALSILSENEFAA 739 + G E + GRG+RVLVVEDN+DVG+FSTELL DLGY ++ NAN AL+ +SE+EFA Sbjct: 686 VAVGAEVTASGRGHRVLVVEDNEDVGRFSTELLRDLGYDIRWVGNANEALAAISEDEFAF 745 Query: 740 DLVFSDVIMPGMNGVELAGIIRDRFPGLPVVLTSGYSNVLAENAHSGFELIQKPYSVEAL 799 DLVFSDVIMPGMNGVELA +IR+R+PGLPVVLTSGYS VLAENAH GFELIQKPYSVE L Sbjct: 746 DLVFSDVIMPGMNGVELATLIRERYPGLPVVLTSGYSTVLAENAHHGFELIQKPYSVELL 805 Query: 800 SRTLRKAIAEQR 811 SRTLR+AIA++R Sbjct: 806 SRTLRRAIADRR 817 >ref|YP_001990188.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris TIE-1] gb|ACE99712.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris TIE-1] Length = 795 Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/783 (64%), Positives = 625/783 (79%), Gaps = 4/783 (0%) Query: 29 LQEREAELARIQRIARVGGLEIDFRDGVRNRRSPEYLLVHGLPPEEINETYENWVARIHP 88 L +RE ELA +QRIA+VGG+ +D G RN RSPEYL +HGLPPE +NET+E+WV R+HP Sbjct: 12 LIDRERELAEVQRIAKVGGVVVDLTAGFRNHRSPEYLAIHGLPPEAVNETHEDWVRRLHP 71 Query: 89 EDRERTIRHLFGVLKAGGEDYTAEYRIIRPNDGESRWIRVVAKIERDRSEKKKNALRLVG 148 +DRER R ++K + Y+AEYRIIRPNDGE RWI +I+RD S + A+R+VG Sbjct: 72 DDRERAERQFLDLIKGTSDRYSAEYRIIRPNDGEVRWIAAEGRIDRDESGR---AVRMVG 128 Query: 149 ADLDVTDQMLAQETLRESEERFRLIADSAPVPIWVTKLDRTRSFANRAYLDFLGLPFEEA 208 A +D+TD+ +A+E LRESE+RF+ IADSAPVPIWVT+LDRTRSFANRAY DF+GLP+E+A Sbjct: 129 AHIDITDRAIAREMLRESEQRFKAIADSAPVPIWVTRLDRTRSFANRAYCDFIGLPYEDA 188 Query: 209 IVFDWRKALHPDDLPQILQEQITGELSLKPFVLEARYRNAEGDWRWLRSESQPRWDPNGK 268 +VFDWR +HPDD+ ++++ + GE SL+PFVLE RYR A+G WRW+RSESQPRWDP G+ Sbjct: 189 LVFDWRSIIHPDDVAEVVRNSVAGEASLQPFVLEGRYRRADGQWRWIRSESQPRWDPAGR 248 Query: 269 HIGFIGVAHDITAAKEAEIELRKLNESLERRILERTAQLESREAQTRAILETSHQYQMLL 328 HIGFIGVAHDIT AK+AEI+LR +NE+LER I +RTAQL S E+Q RAILET++QYQ LL Sbjct: 249 HIGFIGVAHDITTAKQAEIDLRNVNETLERLIAQRTAQLHSSESQLRAILETTNQYQGLL 308 Query: 329 NRDGDLLYSNQTALAGICTDAADVVGKPFWDTPWFAATEGMPRVIRNAFATVMRGEEVKI 388 + G LLY N TALAGI + A V+G FW TPWF A I AF T GE K+ Sbjct: 309 DLKGRLLYVNGTALAGIAAEPAQVLGALFWKTPWFEAAPEAASAIERAFRTARVGEIAKL 368 Query: 389 EMQLRLPIGERYFDFAMRPLQDQHGTIVGAVPEAVDITERRRGEEALRQSQKMEAVGQLT 448 +++L+LP G R+ DF++RP+ D G ++ + E +D TERRR EEALRQ+QKMEAVGQLT Sbjct: 369 DLELQLPAGTRHIDFSLRPVADTQGGVMAVLAEGIDSTERRRNEEALRQAQKMEAVGQLT 428 Query: 449 GGVAHDFNNLLTIIRSATDFLRRRELPDDRRRRYIDAISETVERASKLTAQLLAFARRQP 508 GGVAHDFNNLLTIIRSA DFLRRR+LP++RRRRY+DAIS+T +RASKLT QLLAFARRQP Sbjct: 429 GGVAHDFNNLLTIIRSAVDFLRRRDLPEERRRRYVDAISDTADRASKLTGQLLAFARRQP 488 Query: 509 LNPEVFNVGTQVDSVTQLIRPLVGARIHIEVRIEDPDCFAIADIGQFETALLNLAVNARD 568 L+P VF+V Q+ S+ LIRPLVG+R+ I+V +AIAD+GQFETAL+NLAVN RD Sbjct: 489 LSPVVFDVAAQIQSIANLIRPLVGSRVEIDVDTGSGPNYAIADVGQFETALVNLAVNGRD 548 Query: 569 AMSGEGQLTIGVRKVKNIPALRAQASRSGDFVTVSIQDTGTGISPENLDAIFEPFFTTKE 628 AM+GEG+L+I +R+V IP +R+Q +R G+FV +S+ D+G+GI+P +LD IFEPFFTTKE Sbjct: 549 AMNGEGRLSIALRRVDEIPPVRSQPARPGEFVAISVTDSGSGIAPTHLDVIFEPFFTTKE 608 Query: 629 VGKGTGLGLSQAFGFVKQSDGDIEVTSTPGHGATFTIYLPQAMRPADAKVAASAGTEQAS 688 VG+GTGLGLSQAFGF KQS G+I V ST GATFTIYLPQA P A + T+ A Sbjct: 609 VGRGTGLGLSQAFGFAKQSGGEISVHSTLDEGATFTIYLPQAQAPEQTAAATLSRTDPAG 668 Query: 689 IGRGYRVLVVEDNDDVGQFSTELLEDLGYSVKRAANANAALSILSENEFAADLVFSDVIM 748 G G+R+LVVEDN +VG+FSTELL+DLGY++K +A+ AL+ L E+EFA DLVFSDVIM Sbjct: 669 -GLGHRILVVEDNVEVGKFSTELLQDLGYTIKWVKSADEALAALDEDEFAFDLVFSDVIM 727 Query: 749 PGMNGVELAGIIRDRFPGLPVVLTSGYSNVLAENAHSGFELIQKPYSVEALSRTLRKAIA 808 PG NGVELA IIR+R+PGLPVVLTSGYS+VLAENAH GFEL+QKPYSVEA+SR LR+AI+ Sbjct: 728 PGKNGVELATIIRERYPGLPVVLTSGYSSVLAENAHQGFELVQKPYSVEAISRVLRRAIS 787 Query: 809 EQR 811 E+R Sbjct: 788 ERR 790