BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0246.0007.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004142941.1| hypothetical protein Mesci_3773 [Mesorhizobi...   207   5e-52
ref|YP_004611567.1| hypothetical protein Mesop_3020 [Mesorhizobi...   206   1e-51
ref|YP_003692363.1| hypothetical protein Snov_0411 [Starkeya nov...   199   1e-49
ref|NP_625196.1| hypothetical protein SCO0897 [Streptomyces coel...   169   2e-40
ref|ZP_06532807.1| conserved hypothetical protein [Streptomyces ...   168   2e-40

>ref|YP_004142941.1| hypothetical protein Mesci_3773 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gb|ADV12891.1| protein of unknown function DUF296 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 147

 Score =  207 bits (526), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 118/144 (81%)

Query: 1   MKSKLVSDAPSAQVHVVVLDSGEEAFGALTKFANDAKVTAASLTAIGAFERATVGWFDFA 60
           MKS+LV++    +  V+VLD GEEAF ALT FA D K+ +ASLTAIGAFE+ATVGWFD  
Sbjct: 1   MKSQLVNEIGGQRTFVLVLDPGEEAFAALTAFAVDQKIGSASLTAIGAFEKATVGWFDPD 60

Query: 61  SKSYRKIEIDEQCEVLCAIGDIATGDDGKASLHVHIVLGLSDGSTRGGHLLAGIVRPTLE 120
           +K+YRKI IDEQCEVL AIGD+A GDD K SLHVH VLGLSDG+TRGGHLL GIVRPTLE
Sbjct: 61  AKTYRKIPIDEQCEVLSAIGDVALGDDDKPSLHVHAVLGLSDGTTRGGHLLEGIVRPTLE 120

Query: 121 VVVTEAPARLRRRKRPELGLALID 144
           + + EAP  LRR KRP+LG+ALID
Sbjct: 121 ITLVEAPGHLRRSKRPDLGVALID 144


>ref|YP_004611567.1| hypothetical protein Mesop_3020 [Mesorhizobium opportunistum
           WSM2075]
 gb|AEH87473.1| protein of unknown function DUF296 [Mesorhizobium opportunistum
           WSM2075]
          Length = 147

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 116/144 (80%)

Query: 1   MKSKLVSDAPSAQVHVVVLDSGEEAFGALTKFANDAKVTAASLTAIGAFERATVGWFDFA 60
           MKS+LV++    +  V+VLD GEEAF ALT FA D KV  ASLTAIGAFERATVGWFD  
Sbjct: 1   MKSRLVNEISGQRTFVIVLDPGEEAFAALTDFAADRKVDGASLTAIGAFERATVGWFDPD 60

Query: 61  SKSYRKIEIDEQCEVLCAIGDIATGDDGKASLHVHIVLGLSDGSTRGGHLLAGIVRPTLE 120
           +K+YR+I ++EQCEVL AIGD+A GDDGK SLHVH VLGLSDG+TRGGHLL  IVRPTLE
Sbjct: 61  AKTYRRIPVEEQCEVLSAIGDVALGDDGKPSLHVHAVLGLSDGTTRGGHLLDAIVRPTLE 120

Query: 121 VVVTEAPARLRRRKRPELGLALID 144
           V + EAP  LRR KRP LG+ALID
Sbjct: 121 VTLVEAPGHLRRSKRPGLGVALID 144


>ref|YP_003692363.1| hypothetical protein Snov_0411 [Starkeya novella DSM 506]
 gb|ADH87744.1| protein of unknown function DUF296 [Starkeya novella DSM 506]
          Length = 148

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 116/144 (80%)

Query: 1   MKSKLVSDAPSAQVHVVVLDSGEEAFGALTKFANDAKVTAASLTAIGAFERATVGWFDFA 60
           MKSKL+ +    ++  +VLD GEEAF A+  FA    ++AAS+TAIGAF RATVGWFDF 
Sbjct: 1   MKSKLLGEGEGGRLFALVLDPGEEAFAAIRDFAAKEGISAASVTAIGAFSRATVGWFDFD 60

Query: 61  SKSYRKIEIDEQCEVLCAIGDIATGDDGKASLHVHIVLGLSDGSTRGGHLLAGIVRPTLE 120
           ++ YR+I ++EQCEVL A+GDIA  DDGKASLH+H VLGLSDGSTRGGHLL GIVRPTLE
Sbjct: 61  TRDYRRIPVEEQCEVLSALGDIARDDDGKASLHLHAVLGLSDGSTRGGHLLDGIVRPTLE 120

Query: 121 VVVTEAPARLRRRKRPELGLALID 144
           V++TE PA L RRKRP LG++LID
Sbjct: 121 VMITETPAHLHRRKRPGLGISLID 144


>ref|NP_625196.1| hypothetical protein SCO0897 [Streptomyces coelicolor A3(2)]
 emb|CAB62688.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 197

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/145 (60%), Positives = 106/145 (73%), Gaps = 2/145 (1%)

Query: 1   MKSKLVSDAPSAQVHVVVLDSGEEAFGALTKFANDAKVTAASLTAIGAFERATVGWFDFA 60
           MK + V + PSA V+VVVLD GE+A   LT FA +  + A+ +TA+GAF +A VGWFD  
Sbjct: 54  MKWQQVQEGPSA-VYVVVLDQGEDAVAELTAFARERSLGASQVTAVGAFSQAVVGWFDRQ 112

Query: 61  SKSYRKIEIDEQCEVLCAIGDIATGDDGKASLHVHIVLGLSDGSTRGGHLLAGIVRPTLE 120
           +K YR I + EQCEVL  IGDIA  DDG    H+H VLGLSDGSTRGGHLL+G V PTLE
Sbjct: 113 AKDYRHIPVREQCEVLSLIGDIAVADDGPTP-HLHAVLGLSDGSTRGGHLLSGRVWPTLE 171

Query: 121 VVVTEAPARLRRRKRPELGLALIDP 145
           VVV ++PA L +  RP++GLALIDP
Sbjct: 172 VVVRDSPAELAKIHRPDIGLALIDP 196


>ref|ZP_06532807.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gb|EFD71057.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 144

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/145 (60%), Positives = 106/145 (73%), Gaps = 2/145 (1%)

Query: 1   MKSKLVSDAPSAQVHVVVLDSGEEAFGALTKFANDAKVTAASLTAIGAFERATVGWFDFA 60
           MK + V + PSA V+VVVLD GE+A   LT FA +  + A+ +TA+GAF +A VGWFD  
Sbjct: 1   MKWQQVQEGPSA-VYVVVLDQGEDAVAELTAFARERSLGASQVTAVGAFSQAVVGWFDRQ 59

Query: 61  SKSYRKIEIDEQCEVLCAIGDIATGDDGKASLHVHIVLGLSDGSTRGGHLLAGIVRPTLE 120
           +K YR I + EQCEVL  IGDIA  DDG    H+H VLGLSDGSTRGGHLL+G V PTLE
Sbjct: 60  AKDYRHIPVREQCEVLSLIGDIAVADDGPTP-HLHAVLGLSDGSTRGGHLLSGRVWPTLE 118

Query: 121 VVVTEAPARLRRRKRPELGLALIDP 145
           VVV ++PA L +  RP++GLALIDP
Sbjct: 119 VVVRDSPAELAKIHRPDIGLALIDP 143